G255435


Basic Information

Item Value
gene id G255435
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 15332126 ~ 15332451 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU302361
CCtgatcaaaagtttacataccctggTGATTTTGGCCTGATAACATGCAAACAAGTTGCCACAAATGAGTTTGAATGGCTATTAAAGGTAGCCATCCTCACCTGTGACCTGTTTGCttgtaattagtgtgtgtgtgtataaaagttCAATGAGTTTCTGGACTCCTGACAGACCCTTGCATCTTTCATCCAATGCCGCACTGATGTTTTTGAATTCTGAGTCATGGGGAAAGCAAAAGAATTGTCAAAGGATCTGCGGGAAAAGGTAGTTGAACTGTATAAAACAGGaaagggatataaaaagatatccAAGGAATTGAGAATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302361 True 326 lncRNA 0.40 1 15332126 15332451

Neighbor

gene id symbol gene type direction distance location
si:rp71-79p20.2 LOC108275774 coding downstream 74375 15187398 ~ 15257751 (-)
gss gss,LOC107594436 coding downstream 191147 15125347 ~ 15140979 (-)
acss2 acss2,LOC108438110,LOC107666475 coding downstream 215500 15093797 ~ 15116626 (-)
osbpl2b osbpl2,osbpl2b,LOC107727008,LOC107681391,LOC107666451,LOC107705692 coding downstream 329449 14981346 ~ 15002677 (-)
adrm1 adrm1,LOC106534082,LOC103354471,LOC105894265,LOC107727009,LOC108276396 coding downstream 352838 14973016 ~ 14979288 (-)
birc7 LOC108275549 coding upstream 7545 15339996 ~ 15357857 (-)
lmod3 lmod3 coding upstream 79719 15412170 ~ 15451350 (-)
zbtb46 zbtb46,zbtb24,LOC106676336 coding upstream 123067 15455518 ~ 15561114 (-)
LOC113530990 NA coding upstream 155306 15487757 ~ 15487859 (-)
uckl1b uckl1,uckl1b,LOC107697006,LOC107723126,LOC108411658,LOC107705741,LOC107673346,LOC103372048 coding upstream 275834 15608285 ~ 15652605 (-)
G255385 NA non-coding downstream 104166 15182157 ~ 15227960 (-)
G255403 NA non-coding downstream 151486 15180386 ~ 15180640 (-)
G255306 NA non-coding downstream 453620 14875644 ~ 14878506 (-)
G255020 NA non-coding downstream 799538 14530825 ~ 14532588 (-)
G254567 NA non-coding downstream 1631721 13700009 ~ 13700405 (-)
G255506 NA non-coding upstream 121682 15454133 ~ 15454354 (-)
G255693 NA non-coding upstream 320396 15652847 ~ 15657703 (-)
G255772 NA non-coding upstream 511140 15843591 ~ 15849718 (-)
G255781 NA non-coding upstream 548840 15881291 ~ 15881909 (-)
LOC113530984 NA non-coding upstream 551424 15883875 ~ 15890989 (-)
LOC113530775 NA other downstream 14761 15258485 ~ 15317365 (-)
G255071 krt8,LOC108411779,LOC100304655,LOC107551542,LOC107681390,LOC107705700,LOC107666368,LOC102212080,LOC102292851,LOC102776167,LOC101486263,LOC103367855,LOC107391340 other downstream 627856 14699272 ~ 14704270 (-)
LOC113530423 LOC108276099 other downstream 1181545 14128963 ~ 14150581 (-)
oprl1 oprl1,LOC107681404,LOC107727003,LOC107666560 other downstream 2048241 13251140 ~ 13283885 (-)
plagl2 plagl2,LOC107690855,LOC107681868,LOC107559482,LOC107747490,LOC107558237,LOC107707758 other downstream 2397818 12897474 ~ 12934308 (-)
znf512b znf512b,si:dkey-256k13.2 other upstream 325885 15658336 ~ 15820241 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other upstream 1315372 16647823 ~ 16695031 (-)
si:ch211-210c8.6 NA other upstream 1455350 16787801 ~ 16838649 (-)
dazap2 dazap2 other upstream 1520477 16852928 ~ 16871164 (-)
kcng1 kcng1,LOC107711602,LOC107590496,LOC107738482,LOC107558732 other upstream 2551792 17884243 ~ 17913277 (-)

Expression


Co-expression Network