G255903


Basic Information

Item Value
gene id G255903
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 16215001 ~ 16215228 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU302894
AATGAAACAACTTGAAGAGTGAAGAACTTGCCAAGAAACTGAAGATAACTTAGAAAGACAAGTGTggcggaccaaccgagaagtggacgtccacaaacatccactgacaaaggcacaaccgacgtggtgctggaatacatagtcccctatgtatggagacttttgggacaccctgtagaatgtttttgcaagaaagagtgggaaaatattgctaaaTCAAAATGTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302894 True 228 lncRNA 0.43 1 16215001 16215228

Neighbor

gene id symbol gene type direction distance location
uckl1b uckl1,uckl1b,LOC107697006,LOC107723126,LOC108411658,LOC107705741,LOC107673346,LOC103372048 coding downstream 562396 15608285 ~ 15652605 (-)
zbtb46 zbtb46,zbtb24,LOC106676336 coding downstream 653887 15455518 ~ 15561114 (-)
LOC113530990 NA coding downstream 727142 15487757 ~ 15487859 (-)
lmod3 lmod3 coding downstream 763651 15412170 ~ 15451350 (-)
birc7 LOC108275549 coding downstream 857144 15339996 ~ 15357857 (-)
sars1 sars,LOC107697960,LOC107671868 coding upstream 358798 16574026 ~ 16587748 (-)
si:ch211-207e14.4 LOC108276234 coding upstream 426232 16641460 ~ 16647701 (-)
cs cs,LOC107707042,LOC107671863,LOC107697968 coding upstream 492962 16708190 ~ 16762693 (-)
rapgef3 LOC108275659,LOC108425525 coding upstream 909791 17125019 ~ 17171019 (-)
LOC113530577 NA coding upstream 993657 17208885 ~ 17226734 (-)
G255892 NA non-coding downstream 14669 16199900 ~ 16200332 (-)
G255871 NA non-coding downstream 23602 16109620 ~ 16191399 (-)
G255864 NA non-coding downstream 33869 16174512 ~ 16181132 (-)
G255862 NA non-coding downstream 49811 16151033 ~ 16165190 (-)
G255884 NA non-coding downstream 79942 16134461 ~ 16135059 (-)
G255904 NA non-coding upstream 1251 16216479 ~ 16216695 (-)
G256004 NA non-coding upstream 151927 16367155 ~ 16378597 (-)
G256040 NA non-coding upstream 282250 16497478 ~ 16497689 (-)
G256043 NA non-coding upstream 288710 16503938 ~ 16504167 (-)
G256047 NA non-coding upstream 292762 16507990 ~ 16508412 (-)
znf512b znf512b,si:dkey-256k13.2 other downstream 394760 15658336 ~ 15820241 (-)
LOC113530775 NA other downstream 897636 15258485 ~ 15317365 (-)
G255071 krt8,LOC108411779,LOC100304655,LOC107551542,LOC107681390,LOC107705700,LOC107666368,LOC102212080,LOC102292851,LOC102776167,LOC101486263,LOC103367855,LOC107391340 other downstream 1510731 14699272 ~ 14704270 (-)
LOC113530423 LOC108276099 other downstream 2064420 14128963 ~ 14150581 (-)
oprl1 oprl1,LOC107681404,LOC107727003,LOC107666560 other downstream 2931116 13251140 ~ 13283885 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other upstream 432595 16647823 ~ 16695031 (-)
si:ch211-210c8.6 NA other upstream 572573 16787801 ~ 16838649 (-)
dazap2 dazap2 other upstream 637700 16852928 ~ 16871164 (-)
kcng1 kcng1,LOC107711602,LOC107590496,LOC107738482,LOC107558732 other upstream 1669015 17884243 ~ 17913277 (-)
znf217 znf217 other upstream 2070258 18285486 ~ 18300687 (-)

Expression


Co-expression Network