G256223


Basic Information

Item Value
gene id G256223
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 16874562 ~ 16874767 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU303260
gtccaAATTTGAGATCTTTGGTTCTAACCGCCGTGTCTTTGTTAGACGTAGAGAGGGTGAACGGACGGTTCCTGAATGTGTGgttcccactgtgaagcatggaggaggaggtgtgatggtgtgggggtgCTTTGCTGGTGACACTGCTGGTGACTTAGTCAAAACTTAACCAGCATggctaccacagcattttgcagagACATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303260 True 206 lncRNA 0.50 1 16874562 16874767

Neighbor

gene id symbol gene type direction distance location
cs cs,LOC107707042,LOC107671863,LOC107697968 coding downstream 111869 16708190 ~ 16762693 (-)
si:ch211-207e14.4 LOC108276234 coding downstream 226861 16641460 ~ 16647701 (-)
sars1 sars,LOC107697960,LOC107671868 coding downstream 286814 16574026 ~ 16587748 (-)
uckl1b uckl1,uckl1b,LOC107697006,LOC107723126,LOC108411658,LOC107705741,LOC107673346,LOC103372048 coding downstream 1221957 15608285 ~ 15652605 (-)
LOC113530990 NA coding downstream 1386703 15487757 ~ 15487859 (-)
rapgef3 LOC108275659,LOC108425525 coding upstream 250252 17125019 ~ 17171019 (-)
LOC113530577 NA coding upstream 334118 17208885 ~ 17226734 (-)
LOC113530575 NA coding upstream 855945 17730712 ~ 17735744 (-)
taf8 taf8,LOC107594013,LOC107671856,LOC107723763,LOC107549030 coding upstream 872515 17747282 ~ 17754344 (-)
g0s2 g0s2 coding upstream 880825 17755592 ~ 17756555 (-)
G256208 NA non-coding downstream 21890 16851733 ~ 16852672 (-)
G256212 NA non-coding downstream 45127 16829215 ~ 16829435 (-)
G256199 NA non-coding downstream 79793 16794444 ~ 16794769 (-)
G256197 NA non-coding downstream 81282 16792917 ~ 16793280 (-)
LOC113530431 NA non-coding downstream 91685 16781128 ~ 16782877 (-)
G256296 NA non-coding upstream 159124 17033891 ~ 17034208 (-)
G256313 NA non-coding upstream 173885 17048652 ~ 17048999 (-)
G256368 NA non-coding upstream 228965 17103732 ~ 17106368 (-)
G256393 NA non-coding upstream 300917 17175684 ~ 17177230 (-)
G256403 NA non-coding upstream 316332 17191099 ~ 17193072 (-)
dazap2 dazap2 other downstream 3398 16852928 ~ 16871164 (-)
si:ch211-210c8.6 NA other downstream 35913 16787801 ~ 16838649 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other downstream 179531 16647823 ~ 16695031 (-)
znf512b znf512b,si:dkey-256k13.2 other downstream 1054321 15658336 ~ 15820241 (-)
LOC113530775 NA other downstream 1557197 15258485 ~ 15317365 (-)
kcng1 kcng1,LOC107711602,LOC107590496,LOC107738482,LOC107558732 other upstream 1009476 17884243 ~ 17913277 (-)
znf217 znf217 other upstream 1410719 18285486 ~ 18300687 (-)
LOC113530839 LOC108275928,LOC108425553 other upstream 1634381 18509148 ~ 18531252 (-)
lrp1ab lrp1,lrp1ab,LOC108425568,LOC107593902,LOC107673053 other upstream 2061810 18936577 ~ 19064582 (-)
LOC113530570 NA other upstream 2495920 19370687 ~ 19387041 (-)

Expression


Co-expression Network