G256296


Basic Information

Item Value
gene id G256296
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 17033891 ~ 17034208 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU303344
CAACAGTTAGCATTAGAGTCTTGCAGCTATTAACTCCAACCTCATTCAGTTTCATTTATCAAGCATCTATAGAACACGTCAGCAGACACATGTGCTCAcgctctctgtttctctcacacgcacgcacgcacgcacaggTTGGATTACATTTAGTGCAGTGGTCCCAAAACAGAGCAAGCCACAAAGAGAGGAAGCAGGAATAACATGAACATAAAGGTAACAAACAGAAATCTTTCTACATCCTCACACATAAATGATGTTTCCCCTCCAGGCCAGGCTTGAGACCACTGGTGTAGTTCATTTTACATCAAGACAACa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303344 True 318 lncRNA 0.43 1 17033891 17034208

Neighbor

gene id symbol gene type direction distance location
cs cs,LOC107707042,LOC107671863,LOC107697968 coding downstream 271198 16708190 ~ 16762693 (-)
si:ch211-207e14.4 LOC108276234 coding downstream 386190 16641460 ~ 16647701 (-)
sars1 sars,LOC107697960,LOC107671868 coding downstream 446143 16574026 ~ 16587748 (-)
uckl1b uckl1,uckl1b,LOC107697006,LOC107723126,LOC108411658,LOC107705741,LOC107673346,LOC103372048 coding downstream 1381286 15608285 ~ 15652605 (-)
LOC113530990 NA coding downstream 1546032 15487757 ~ 15487859 (-)
rapgef3 LOC108275659,LOC108425525 coding upstream 90811 17125019 ~ 17171019 (-)
LOC113530577 NA coding upstream 174677 17208885 ~ 17226734 (-)
LOC113530575 NA coding upstream 696504 17730712 ~ 17735744 (-)
taf8 taf8,LOC107594013,LOC107671856,LOC107723763,LOC107549030 coding upstream 713074 17747282 ~ 17754344 (-)
g0s2 g0s2 coding upstream 721384 17755592 ~ 17756555 (-)
G256223 NA non-coding downstream 159124 16874562 ~ 16874767 (-)
G256208 NA non-coding downstream 181219 16851733 ~ 16852672 (-)
G256212 NA non-coding downstream 204456 16829215 ~ 16829435 (-)
G256199 NA non-coding downstream 239122 16794444 ~ 16794769 (-)
G256197 NA non-coding downstream 240611 16792917 ~ 16793280 (-)
G256313 NA non-coding upstream 14444 17048652 ~ 17048999 (-)
G256368 NA non-coding upstream 69524 17103732 ~ 17106368 (-)
G256393 NA non-coding upstream 141476 17175684 ~ 17177230 (-)
G256403 NA non-coding upstream 156891 17191099 ~ 17193072 (-)
G256413 NA non-coding upstream 180636 17214844 ~ 17240869 (-)
dazap2 dazap2 other downstream 162727 16852928 ~ 16871164 (-)
si:ch211-210c8.6 NA other downstream 195242 16787801 ~ 16838649 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other downstream 338860 16647823 ~ 16695031 (-)
znf512b znf512b,si:dkey-256k13.2 other downstream 1213650 15658336 ~ 15820241 (-)
LOC113530775 NA other downstream 1716526 15258485 ~ 15317365 (-)
kcng1 kcng1,LOC107711602,LOC107590496,LOC107738482,LOC107558732 other upstream 850035 17884243 ~ 17913277 (-)
znf217 znf217 other upstream 1251278 18285486 ~ 18300687 (-)
LOC113530839 LOC108275928,LOC108425553 other upstream 1474940 18509148 ~ 18531252 (-)
lrp1ab lrp1,lrp1ab,LOC108425568,LOC107593902,LOC107673053 other upstream 1902369 18936577 ~ 19064582 (-)
LOC113530570 NA other upstream 2336479 19370687 ~ 19387041 (-)

Expression


Co-expression Network