Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaq-uug_7 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21354439 ~ 21354697 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306265 | True | 249 | lncRNA | 0.38 | 1 | 21354439 | 21354687 |
| trnaq-uug_7 | False | 72 | tRNA | 0.51 | 1 | 21354626 | 21354697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ednrab | LOC108276021 | coding | downstream | 49811 | 21297056 ~ 21304628 (-) |
| LOC113530756 | LOC108276020,LOC108435576,LOC107101953 | coding | downstream | 59666 | 21287614 ~ 21294773 (-) |
| wu:fy63c09 | NA | coding | downstream | 81428 | 21259533 ~ 21273011 (-) |
| LOC113530739 | LOC108275468 | coding | downstream | 135526 | 21212913 ~ 21218913 (-) |
| LOC113530510 | NA | coding | downstream | 163411 | 21189381 ~ 21191028 (-) |
| LOC117599258 | NA | coding | upstream | 118021 | 21472718 ~ 21474842 (-) |
| LOC117599277 | NA | coding | upstream | 139719 | 21494416 ~ 21496055 (-) |
| LOC113530264 | scml2,LOC108275918,LOC107694433,LOC107752426,LOC107564407 | coding | upstream | 273435 | 21628132 ~ 21671352 (-) |
| ftr92 | NA | coding | upstream | 474568 | 21829265 ~ 21835197 (-) |
| gpsm2l | LOC108275742,LOC108435558,LOC107754905,LOC107697895 | coding | upstream | 503515 | 21858212 ~ 21883246 (-) |
| G258626 | NA | non-coding | downstream | 113379 | 21238036 ~ 21241060 (-) |
| G258596 | NA | non-coding | downstream | 186841 | 21153906 ~ 21167598 (-) |
| G258437 | NA | non-coding | downstream | 400587 | 20953626 ~ 20953852 (-) |
| G258427 | cptp,LOC108433359,LOC107599683,LOC107697856,LOC107706969,LOC107664144 | non-coding | downstream | 451682 | 20901278 ~ 20902757 (-) |
| G258424 | NA | non-coding | downstream | 470344 | 20883799 ~ 20884095 (-) |
| G258700 | NA | non-coding | upstream | 20201 | 21374898 ~ 21375103 (-) |
| G258771 | NA | non-coding | upstream | 159950 | 21514647 ~ 21555460 (-) |
| LOC117599221 | NA | non-coding | upstream | 229018 | 21583715 ~ 21586639 (-) |
| LOC113530427 | NA | non-coding | upstream | 233732 | 21588429 ~ 21599129 (-) |
| G258940 | NA | non-coding | upstream | 395094 | 21749791 ~ 21750001 (-) |
| G258580 | map7 | other | downstream | 184741 | 21168986 ~ 21169698 (-) |
| camk2n1b | camk2n1,LOC107664141 | other | downstream | 378109 | 20973397 ~ 20976330 (-) |
| LOC117599256 | LOC103359731 | other | downstream | 486435 | 20829388 ~ 20868004 (-) |
| nfe2 | nfe2 | other | downstream | 828975 | 20518425 ~ 20525464 (-) |
| G258077 | rarg | other | downstream | 1082532 | 20252170 ~ 20271907 (-) |
| fyco1a | LOC108275732 | other | upstream | 570547 | 21925244 ~ 21954662 (-) |
| cpeb2 | cpeb2,LOC108276376 | other | upstream | 661350 | 22016047 ~ 22048388 (-) |
| G259306 | LOC108275814,LOC108411446 | other | upstream | 1091333 | 22446030 ~ 22449427 (-) |
| si:ch73-217n20.1 | NA | other | upstream | 1606881 | 22961578 ~ 22980986 (-) |
| LOC113530288 | vstm2l | other | upstream | 1837560 | 23192257 ~ 23240347 (-) |
