Gene
RNA
| Item | Value |
|---|---|
| gene id | G259839 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23022414 ~ 23022680 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU307596 | True | 267 | lncRNA | 0.41 | 1 | 23022414 | 23022680 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pfkfb2a | pfkfb2a,LOC108276158,LOC108439471,LOC104942567,LOC103358644 | coding | downstream | 17807 | 22986458 ~ 23004607 (-) |
| LOC113530928 | NA | coding | downstream | 200217 | 22813004 ~ 22822197 (-) |
| LOC113530929 | NA | coding | downstream | 211793 | 22801924 ~ 22810621 (-) |
| pdyn | pdyn | coding | downstream | 260394 | 22758451 ~ 22762020 (-) |
| LOC113530789 | LOC108275917,LOC108439484 | coding | downstream | 280860 | 22733952 ~ 22741554 (-) |
| rprd1b | rprd1b | coding | upstream | 158929 | 23181609 ~ 23186306 (-) |
| ctnnbl1 | ctnnbl1,LOC107694421 | coding | upstream | 222049 | 23244729 ~ 23279510 (-) |
| itchb | LOC108276113,LOC108442805,LOC108233117 | coding | upstream | 308569 | 23331249 ~ 23359264 (-) |
| LOC113530415 | NA | coding | upstream | 370992 | 23393672 ~ 23395815 (-) |
| LOC113530552 | NA | coding | upstream | 500733 | 23523413 ~ 23527413 (-) |
| G259838 | NA | non-coding | downstream | 844 | 23021361 ~ 23021570 (-) |
| G259812 | NA | non-coding | downstream | 4054 | 23017306 ~ 23018360 (-) |
| G259809 | NA | non-coding | downstream | 10052 | 23010849 ~ 23012362 (-) |
| G259811 | LOC100697131,LOC105901900 | non-coding | downstream | 11864 | 23006360 ~ 23010550 (-) |
| G259724 | NA | non-coding | downstream | 234435 | 22742744 ~ 22787979 (-) |
| G259897 | NA | non-coding | upstream | 157702 | 23180382 ~ 23181592 (-) |
| G260021 | NA | non-coding | upstream | 309989 | 23332669 ~ 23335335 (-) |
| G260055 | NA | non-coding | upstream | 446121 | 23468801 ~ 23469073 (-) |
| G260056 | NA | non-coding | upstream | 451370 | 23474050 ~ 23474641 (-) |
| G260071 | NA | non-coding | upstream | 499535 | 23522215 ~ 23522708 (-) |
| si:ch73-217n20.1 | NA | other | downstream | 41428 | 22961578 ~ 22980986 (-) |
| G259306 | LOC108275814,LOC108411446 | other | downstream | 572987 | 22446030 ~ 22449427 (-) |
| cpeb2 | cpeb2,LOC108276376 | other | downstream | 974026 | 22016047 ~ 22048388 (-) |
| fyco1a | LOC108275732 | other | downstream | 1067752 | 21925244 ~ 21954662 (-) |
| trnaq-uug_7 | NA | other | downstream | 1667717 | 21354439 ~ 21354697 (-) |
| LOC113530288 | vstm2l | other | upstream | 169577 | 23192257 ~ 23240347 (-) |
| e2f1 | e2f1 | other | upstream | 286219 | 23308899 ~ 23317464 (-) |
| G260310 | NA | other | upstream | 740994 | 23763674 ~ 23764163 (-) |
| LOC113530810 | LOC108275656 | other | upstream | 950685 | 23973365 ~ 23979695 (-) |
| reps2 | reps2 | other | upstream | 1251057 | 24273737 ~ 24316415 (-) |
