G260310


Basic Information

Item Value
gene id G260310
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 23763674 ~ 23764163 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU308180
tctccttctgtctctctctctctctctgtccgtatctgtctttctctctcacacactctctcactctctatatGTCTCACTCCCTGTCattgtctatctctctgtctctctttttctgtctctatttctctctctctctcaatgtctctttcacacacactctctctcacattcatttcagtctctctctctcaccccacAGTCGTCCTGAAGCACAAGATGGTGTGGTATGGAGCTCCTCTCGAGCACCTGGCCATTCCAGCCGTAGAAGCGTACATTGCCAGATGTCTggatggaggtggaggaggtggtgatggaggtggaggaggtggtggaggtggaggaggtggtgatggaggtggtgtctGGCTCGCTGTAGCAGTGGAGCGAGATGGACTGAGTGGCTTCAATGCTCAGCAAGTGCAGAAACTTCATCTGGACCTTACTGACCCCAAGCTCCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308180 True 463 TUCP 0.52 2 23763674 23764163

Neighbor

gene id symbol gene type direction distance location
LOC113530683 LOC108275807,LOC108441536,LOC107550164,LOC107694430,LOC105904845 coding downstream 135296 23619534 ~ 23628378 (-)
LOC113530272 LOC108275809 coding downstream 201310 23556960 ~ 23562364 (-)
abce1 abce1,LOC108275804,LOC108441533,LOC107653221 coding downstream 207375 23547425 ~ 23556299 (-)
LOC113530552 NA coding downstream 236261 23523413 ~ 23527413 (-)
LOC113530415 NA coding downstream 367859 23393672 ~ 23395815 (-)
ccn1 cyr61,cef10 coding upstream 41310 23805473 ~ 23808053 (-)
wdr63 wdr63 coding upstream 164153 23928316 ~ 23951638 (-)
LOC113530771 LOC108276005 coding upstream 249585 24013748 ~ 24020949 (-)
tut4 zcchc11 coding upstream 259462 24023625 ~ 24046654 (-)
LOC113530544 LOC108275752,LOC103033099,LOC108440029,LOC107737066,LOC107687592,LOC107590493 coding upstream 301099 24065262 ~ 24072855 (-)
G260071 NA non-coding downstream 240966 23522215 ~ 23522708 (-)
G260056 NA non-coding downstream 289033 23474050 ~ 23474641 (-)
G260055 NA non-coding downstream 294601 23468801 ~ 23469073 (-)
G260021 NA non-coding downstream 428339 23332669 ~ 23335335 (-)
G259897 NA non-coding downstream 582082 23180382 ~ 23181592 (-)
LOC117599235 NA non-coding upstream 104344 23868507 ~ 23872875 (-)
G260369 c15h1orf52 non-coding upstream 110356 23874519 ~ 23875316 (-)
G260371 NA non-coding upstream 115924 23880087 ~ 23880328 (-)
LOC117599232 NA non-coding upstream 372326 24136489 ~ 24140106 (-)
G260548 NA non-coding upstream 449171 24213334 ~ 24225958 (-)
e2f1 e2f1 other downstream 446210 23308899 ~ 23317464 (-)
LOC113530288 vstm2l other downstream 523327 23192257 ~ 23240347 (-)
si:ch73-217n20.1 NA other downstream 782688 22961578 ~ 22980986 (-)
G259306 LOC108275814,LOC108411446 other downstream 1314247 22446030 ~ 22449427 (-)
cpeb2 cpeb2,LOC108276376 other downstream 1715286 22016047 ~ 22048388 (-)
LOC113530810 LOC108275656 other upstream 209202 23973365 ~ 23979695 (-)
reps2 reps2 other upstream 509574 24273737 ~ 24316415 (-)
LOC113530517 LOC108273546,LOC108270753,LOC108268894,LOC108273219,LOC108261257,LOC108273545,LOC108270747,LOC108261406 other upstream 610110 24374273 ~ 24386255 (-)
tent5ab LOC108275717 other upstream 736966 24501129 ~ 24508468 (-)
si:ch1073-157b13.1 LOC108276418 other upstream 1023527 24787690 ~ 24795423 (-)

Expression


Co-expression Network