Gene
RNA
| Item | Value |
|---|---|
| gene id | anapc10 |
| gene name | anapc10,LOC107550153,LOC107564421 |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23563545 ~ 23568673 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| symbol | description |
|---|---|
| anapc10 | Predicted to be involved in protein K11-linked ubiquitination. Predicted to act upstream of or within anaphase-promoting complex-dependent catabolic process and cell division. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC10 (anaphase promoting complex subunit 10). |
| description |
|---|
| PREDICTED: anaphase-promoting complex subunit 10 |
| id | name | namespace |
|---|---|---|
| GO:0031145 | anaphase-promoting complex-dependent catabolic process | biological_process |
| GO:0030071 | regulation of mitotic metaphase/anaphase transition | biological_process |
| GO:0005680 | anaphase-promoting complex | cellular_component |
| id | description |
|---|---|
| K03357 | APC10, ANAPC10, DOC1; anaphase-promoting complex subunit 10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026920110.2 | True | 894 | mRNA | 0.51 | 5 | 23563545 | 23568673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| otud4 | otud4 | coding | upstream | 17472 | 23530494 ~ 23546073 (+) |
| slc10a7 | slc10a7,LOC107725722,LOC107752196,LOC107694411 | coding | upstream | 41730 | 23510603 ~ 23521815 (+) |
| LOC113530383 | NA | coding | upstream | 53892 | 23507539 ~ 23509653 (+) |
| LOC117599230 | NA | coding | upstream | 56567 | 23505191 ~ 23506978 (+) |
| LOC113530973 | NA | coding | upstream | 69155 | 23488510 ~ 23494390 (+) |
| LOC113530971 | NA | coding | downstream | 3524 | 23572197 ~ 23583979 (+) |
| LOC113530551 | NA | coding | downstream | 16106 | 23584779 ~ 23604485 (+) |
| rnf150b | rnf150a,LOC108275805,LOC107694428,LOC107653218,LOC107564413,LOC107725723,LOC108441535 | coding | downstream | 36431 | 23605104 ~ 23617167 (+) |
| si:ch211-149b19.2 | LOC108275803 | coding | downstream | 61920 | 23630593 ~ 23634770 (+) |
| si:ch211-149b19.3 | LOC108275812,LOC108441537 | coding | downstream | 67574 | 23636247 ~ 23642564 (+) |
| G260074 | NA | non-coding | upstream | 1161 | 23527428 ~ 23562384 (+) |
| G260083 | NA | non-coding | upstream | 8468 | 23554596 ~ 23555077 (+) |
| G260011 | NA | non-coding | upstream | 89101 | 23473913 ~ 23474444 (+) |
| G260009 | NA | non-coding | upstream | 94488 | 23468826 ~ 23469057 (+) |
| G259978 | NA | non-coding | upstream | 201255 | 23344862 ~ 23362290 (+) |
| G260222 | NA | non-coding | downstream | 258219 | 23826892 ~ 23827631 (+) |
| G260223 | NA | non-coding | downstream | 292969 | 23861642 ~ 23862570 (+) |
| G260217 | NA | non-coding | downstream | 298978 | 23867651 ~ 23869556 (+) |
| G260232 | NA | non-coding | downstream | 349208 | 23917881 ~ 23918391 (+) |
| LOC117599261 | NA | non-coding | downstream | 433876 | 24002549 ~ 24003381 (+) |
| G259993 | NA | other | upstream | 174231 | 23387538 ~ 23389314 (+) |
| LOC117599309 | NA | other | upstream | 179892 | 23371744 ~ 23383653 (+) |
| LOC113530514 | LOC108275916 | other | upstream | 883003 | 22671398 ~ 22680542 (+) |
| LOC117599233 | NA | other | upstream | 2021118 | 21538045 ~ 21542427 (+) |
| si:ch73-290k24.5 | LOC108275473 | other | upstream | 2324546 | 21228320 ~ 21238999 (+) |
| G260415 | NA | other | downstream | 463554 | 24032227 ~ 24032724 (+) |
| G260483 | LOC108275756 | other | downstream | 699904 | 24268577 ~ 24269267 (+) |
| rnf146 | rnf146,LOC107751835,LOC107599252,LOC107697902,LOC101069158,LOC107735261,LOC106571496 | other | downstream | 831911 | 24400584 ~ 24453538 (+) |
| ddx58 | ddx58 | other | downstream | 1056264 | 24624937 ~ 24636129 (+) |
