ccn5 (wisp2)


Basic Information

Item Value
gene id ccn5
gene name wisp2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 19263417 ~ 19271222 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920209.2
GAGCCAGCCAGTGAGCAAACAGCAGCACTAGTAGCTCAGCATACTTCGTTGGGACAGTGGGATGgacaaaaaagtgcaaaacacatacACTCTGCTGGCACGGGCACTACTGTTGTACCTGTGCTCCCAGGTATGCTGTCAAAAGTGTACCAGGCCATGCCAGTGTCACAGCTCTGTGCCAGCCTGCCCTGATGGCGTCGCTCTCGTCCTGGACGGATGTGGATGCTGCCAAGTGTGTGCTCGCCAGAAGGGTGAAGCCTGCACCGACATACTCGTGTGTGACAAGCAGCATGGCCTGGAATGTGACTACAGTGCCAGCTTCCCTGGAGATCCGGGagagtgtgtcaGTCAGGAAGAGCTGGGTTGTGAGCTGAATGGCATCTCTTATCAGGAGGGCGAGGTGTTCCAGCCATCCTGTAACACCCAGTGCAAATGTGCAGGTGGAGGAGTGACCTGCGTGCCCCTGTGCAGTTTAGATGTCCGTCTGCCCAGCTCAGACTGCCCATATCCTCAAAAGGTCCAGCTGCCAGGAAAGTGCTGTAAGGAGTGGGTGTGTGAGAACTTGGACAACAGTGTGCTACAGGATGCTCAAGCAGCTTACAGACATGCCCAAGTGTTGCCTGCACTTCCTGGTCACCAAGCCAGCCCCAGTTTAAACTGTATATATCAGAGCTCAGAGTGGAGTGCCTGCTCACGTACCTGTGGCCCAGGGATCTCCACACGCGTGAGCAACCAGAATGCAGCCTGCAGAATTGAGCAGCAGATCAGGCTGTGTAAAATCCGACCATGCCAGGCTTTGCCACATCAAACACCAGTGtgGCCAAGGAGATGCCAATCAAGCTACAGGTCAAATGTTCCTACACGCCTGCTCCATGAAGGCTGCTATAGCACACAATTTTACCGTCCACGTTACTGTGGCTTCTGCACTGATGGCCGATGTTGCACGCCTTATCGGGCCCACACCGTCCCAGTCACCTTCCGCTGCCCAGGGGGCCGCCTGCTCCGCCAAGCTGTCATGATGATCAGGTCCTGTGTTTGTCATTACAACTGCCCCTACTCGTCTGGCCGAACCTACAGGAGCCTTGCTCTGTGGGCATAGAGACTCTCATGCACTGATTCACACAAATCCCAGCTTGAAGCCTAGAAAGAATAGCACTTTGAACATACcacagtatatttttttattaccagGGATGGATTAGTAAATCCTGGACCCCTGGGCAGGAACTGTGCAGGTGCTATGCAGAAGAGAATCTTACTTTAGGCAACTggcttctttcttgcttttctaCTCGCAAACTCTTTCACCAAATCCACCAAATTCCAGCTCTTTAACAAGCTCCAACTCAATGGCCAGCAGTGACAGCATGTTGAGTCTTCTTTGGCCAATTTTAGTTTGGAGTTTGTTTTGAATCCAACCCAGTAGGCAAAATGAACATTCTTTggcttctttcttcttttcatcaACACACATAGTGTGAGTctactatgattttttttccatctgctTCTCTCGCCCTAACTGACCACTCACTGGATACAAATTCAGACCCACACACCAGTAatatttaagaatttatttcatattctgTGACTTTACGTTCATCGGCTTGGGTTCTGTTAACTCACTGCTGTGTGACGGTGTAATGGCTAATCAGACTAATCATTCAGTTCAAATCTATCCTTGTTGGAGACCTGCTAGTTGGCAGGGCCCCTGGACATCTGCCTAATAGACCCAGTCGCTGATCCATCCCTGTAAATTAGGTCATTTTGCATAAAGAGCTTGCTATCACACATACATTTCTGTAGGCCTTGCTCGAGAAGGTAGTGAACTGGCCTGATTCTTCACTTACAGCTTGTGTATATAgaattagtctttttttaatgtggtcGGAATTTCATAATTCAATGGATTTGAGAAGCAAAGAGAAGCCTGTTAAGATGTTTAACCCATCTCTTTTAGTTTATATGATGGCAGCTATTAGTCTTGAGTGCTTACAGCTTCTTATGTAATTTAATTATCGTAACTTGTACACTTACTGTCACTTAGTGTTGAATACttttgaatgtttaaaaatgaagtaGCACTGTAAGTGTAGACTGACATTTCCAATGTTTCTTCCAAGCTTTGATCTGGATCCCTATTTTAGATATTTCATCTCCTACAGACAGCTTTTCCTCCATAaattttaacaaatgtttaatttttaaatttatgtgtTTGGAATGAGATACTTTTCTTCTTTAAGTATTGTAATATTATATCACTAATCCCTACACAGAACAAGGTTATCTTAAATTGGTTTCCTGtatctttccattttctctatCAGTTGTTGTTATCCCTACTAGGCCAGTGAAGATATAAATCCCATTTCAGAGAAGTTTATGTCCAGGCAGCCACTTGAATAAGGACTTGGGTGAAATATTGTATAACCTCTTTTAAAGAGACACCAACTGTTGTGTTGCGAGACCCATTATTTTGCTCATGTAATTTGctgtacatatttgtaaatgcatttattacattatatatatattggtttATAATTTATGTGTCCTCACAACATTATAGATTTCATGTCTGAA

Function

symbol description
wisp2 CCN family member 5

NR:

description
WNT1-inducible-signaling pathway protein 2-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005520 insulin-like growth factor binding molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920209.2 True 2589 mRNA 0.45 5 19263417 19271222

Neighbor

gene id symbol gene type direction distance location
ttpal ttpal,LOC107716173,LOC107695756,LOC107673079,LOC107564663,LOC107568409 coding upstream 68559 19190772 ~ 19194858 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408 coding upstream 75458 19167301 ~ 19187959 (+)
r3hdml r3hdml coding upstream 98156 19161213 ~ 19165261 (+)
rbms2b rbms2b,LOC108275993,LOC108425569,LOC107716168,LOC107737513 coding upstream 145854 19091010 ~ 19117563 (+)
trnae-cuc_34 NA coding upstream 230429 19032917 ~ 19032988 (+)
si:dkey-78k11.9 NA coding downstream 2065 19273287 ~ 19275753 (+)
pfkfb1 pfkfb1,LOC108276267,LOC108425577,LOC107574688,LOC107673088 coding downstream 12275 19283497 ~ 19294201 (+)
itih6 itih6 coding downstream 24297 19295519 ~ 19309834 (+)
atp6ap1b LOC108275744 coding downstream 51577 19322799 ~ 19331974 (+)
ptpn22 NA coding downstream 168214 19439436 ~ 19465336 (+)
G257242 NA non-coding upstream 11620 19251445 ~ 19251797 (+)
G257234 NA non-coding upstream 17710 19243185 ~ 19245707 (+)
G257232 NA non-coding upstream 21849 19241112 ~ 19241568 (+)
G257235 NA non-coding upstream 28156 19233003 ~ 19235261 (+)
G257199 NA non-coding upstream 144884 19117877 ~ 19118533 (+)
G257245 NA non-coding downstream 18698 19289920 ~ 19338836 (+)
LOC113530341 NA non-coding downstream 75089 19346311 ~ 19350848 (+)
G257256 NA non-coding downstream 83505 19354727 ~ 19359740 (+)
G257255 NA non-coding downstream 86289 19357511 ~ 19361051 (+)
G257283 NA non-coding downstream 122315 19393537 ~ 19393903 (+)
pkig NA other upstream 40858 19198426 ~ 19222559 (+)
fmnl3 LOC108276057,LOC108425567,LOC107716159 other upstream 329098 18879481 ~ 18934319 (+)
LOC113530386 slc26a9 other upstream 2075040 17175701 ~ 17188377 (+)
itga5 itga5,LOC107599342,LOC107723722 other upstream 2138466 17071136 ~ 17124951 (+)
G256046 NA other upstream 2755037 16508025 ~ 16508380 (+)
G257622 LOC108276210 other downstream 207080 19478302 ~ 19478895 (+)
si:ch73-206d17.1 LOC108275771 other downstream 354307 19625529 ~ 19705063 (+)
G258096 hoxc6,hoxc6a,LOC107593966,LOC108433405,LOC107664205,LOC107714999,LOC103034651 other downstream 1119587 20390809 ~ 20398714 (+)
LOC113530729 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC107714994 other downstream 1239022 20510244 ~ 20514195 (+)
ubxn10 ubxn10,LOC108275535,LOC108433381,LOC107385551,LOC107699345 other downstream 1631883 20903105 ~ 20907459 (+)

Expression


Co-expression Network