fitm2 (fitm2)


Basic Information

Item Value
gene id fitm2
gene name fitm2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 19143737 ~ 19148012 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920221.2
ACCCGGAAGTGACTCATTCATGATCTTTCTTGTCATTGATCTTGAAGCTGGTGTTAATTCTGTTTAGTTGTGTTGGGACACAATGTCTGCGTTAAGCGGCGTCGTGAATAAATCGCTTCCTTTTCTGGTATTTAATGTTACAGTTGCGCGCAAATATTTGccgttgtttttctttgctgtttcaCTTGGAGGATCATTATTAAAAGAACTGGAGTTTGTGCCGAACTCTTACTTCAGCCACAGTAGAAACCTTCTGAACGTATATTTTGTGAAATTCTCCTGGGGATGGAACCTGGTCCTGTTGCTACCGTTTATATTTCTGTCCAACTCCTACAACAGAAACCTCATCTTCGTGTCCAAACGCCTCACATCTCTTGTGGTAGCCACAGCCATTTGGTACTCCTGCACTGAGACTTTCTTCTACATTGAAAATATCACAGGAGCATGCTACAAGTCAGACAACTTGCAAATGGTCCAGGAGGATTTCAGCATAAAGGCAGAGTGCAAAAATGCCGGCCACTTTTGGGACGGTTTCGACATATCCGGCCACTCCTTCATATTATCTTATTCAACACTCATAATTGTGGAAGAAATGGTTCCCATGCTAAACCTTGTGCAACACTACCAAAACAGATCCATCATCCTTGATGCCCTGTACCTCGCACTCAATGCTATCGCGATCATCTGGGTGTGGATGTTTGCTTGCACCTCGGTGTACTTCCACAACACGATCCAGAAGTTTCTGGGCACTTTGTTTGGCGTGTTGGGCTGGTGTGTGACCTATAAGGTTTGGTACTTGAACCCATTTTCACCAGGACTCCCTCCTCGCCCGAGTGACCATAAACAACGACTAGACTGAAGAGTTTACAACGACTTGAAATATTGCAGTGGAACAAACTGACCTGCAAAGCTATGACTCCAACCTTTTGACCAGGGTTATTTGTAGGTTCACTACATGTgttgtttgtccttttttaaaGGTCGTTTGTGACCAAAGGATTTGTGTGATTGTCTCATGGAGGTGGTTGGCAGCTGGTGTTCCAAAACAGACTCTGTAATCGGAAAGCGTCGGCATTATCTAAAGATTATTGTTGCCTTTTAAAATAAGTGGCCTCAGATGTGGGATTCATGAAATCTCCTCAGTGTGCAACTTTATATATGTTTGCATACAATCAGTGCTTTAAGCATGTGTCCCAAATGCTATAATGTCAAGTTTTCTTATTGGTGCatcagccatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaatccataacaCTAGAATGCACAGTAACAGTTCAAGTAAAACTTGTTGATAATTATTATGTTCATGTTGTACAGCCTGTAGCtgagatactgtgtgtgttacccataatgcactggaAGGAAAGAGATTTAAAGTGTAGAAGACTGAATAAAGTTGGCTAGGTTATAtttgtttataccacagcaatgtcgaattcttgattctgattggtcagaaggtgttgatggaTGTTCATTTTcaggctgcaaggcaaattacaggtttaatTACAGgtttaatgtgctctttctaatacattatcgtttctatagcaacagctaattCATAGAGACTTGTACGACGGACACTTCACATAAACGCATTGAAAAACATGAGCAatcgctgatatggtgaagttttgtgtaaggagtctccagtgtcagtgttttctgtaacagtctgaggtaaagttgtaattttatgttttccaaaacaaaagaggacaagttgtgttttttcatcttattaattttaagtaagagaaacattaaatggaactataaaataataaaaaatatcgCATGTTCTTTAATCAATGAacaattgttagcattggcaaattgctgatataagatgaataaaacacttcaggaattgttattgttattgggaaataatcaacttcaagctTGTATAATCAActacatcattgattattttcccataacagcgtgctctgttgtgttttattccattcttAGTGTCCTTTAGTGGCTTGCAGTCAGGTTTAGCTGAGTGCATTGACTTATGTAGAGCACTGTCCTatattatttgttaattatCCTAATATCTATCTACAAAATAGGTAGCTACAATagttatttttgcttttctcgCTACTCTCACTTTTTGATTGTGTCTAtacttatataattatctaCGACGTGTTATGTTTTGTCGATGATTGTTCATTGTTAGTAGATTCCTATCAAACAGTAGAGTTTGGGTTGTCGCCTGATTGTCATTTTGTTGTAACGTAATATGTGTTTTGTGTAAGTGTTTGCCCTTACGATCGTTTCAACTGCTCAGTTAGTTATTGTTATTGGCTGAGTATTATTTAGACTTGTGTCATGCGTTACATATGTTTGCAAATGCAACTCATCATAAAATTACCTCTGATTATAATGCAGGTTTTCCTCTTGAACGTTGTGCGATTATAGTTTTGGAACATCAATTGAATACTTACGTTACATGTTATGTTACATATTATGACATTTTATGACTGCCTTTGTGACTAAAAGTATTGAATTGTCTGCCTTTTAGACATTTGTTTGTCTATTTCAACTCAACTCAGACCTAACAAAAGTGGCTTGTCTTGATTAATCCTGTTAAAGGATTCAGGTACTAAGCATGATGCAGTTATAGATAAAAGATATATTTATGAGAGTGAGACATGAGGAATGAGATATGTTTCTGGGATTTTAAGGGGTTACTCTTTTAGttgtatattaattataatcattGAGCTTTTATGATAACTTATATTGGGGACCTGACTGAATGAGAACATTACCATGTAAAACCTGCACAAGTATTAAAAATCTCATCATTTTTTGGC

Function

symbol description
fitm2 Predicted to enable diacylglycerol binding activity and triglyceride binding activity. Acts upstream of or within several processes, including glucose homeostasis; pancreas regeneration; and type B pancreatic cell development. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in adaxial cell and slow muscle cell. Orthologous to human FITM2 (fat storage inducing transmembrane protein 2).

NR:

description
PREDICTED: fat storage-inducing transmembrane protein 2

GO:

id name namespace
GO:0022604 regulation of cell morphogenesis biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0019915 lipid storage biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0044425 obsolete membrane part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920221.2 True 2867 mRNA 0.37 2 19143737 19148012

Neighbor

gene id symbol gene type direction distance location
LOC113530333 faim2 coding downstream 1263 19130108 ~ 19142474 (-)
trnak-uuu_17 NA coding downstream 15201 19128464 ~ 19128536 (-)
si:dkey-21c19.3 LOC108275992,LOC107737512,LOC106572650 coding downstream 16124 19119031 ~ 19127613 (-)
idh3g LOC108276129,LOC108425561,LOC107673097,LOC107737522,LOC107591068,LOC107716150,LOC107593912 coding downstream 439813 18693407 ~ 18703924 (-)
avpr2aa avpr2,LOC108275493 coding downstream 468525 18657095 ~ 18675212 (-)
ada ada coding upstream 83834 19231846 ~ 19251695 (-)
gdi1 gdi1,LOC108276388,LOC108425579 coding upstream 161900 19309912 ~ 19319756 (-)
LOC113530330 NA coding upstream 186113 19334125 ~ 19363567 (-)
LOC113530320 NA coding upstream 255648 19403660 ~ 19429977 (-)
LOC113530319 LOC108276210,LOC107564641,LOC107716162,LOC107570136,LOC107695834,LOC107668555 coding upstream 318616 19466628 ~ 19481596 (-)
LOC117599228 NA non-coding downstream 24717 19117849 ~ 19119020 (-)
G257471 NA non-coding downstream 203955 18939482 ~ 18939782 (-)
G257458 NA non-coding downstream 207346 18934897 ~ 18936391 (-)
LOC113530357 NA non-coding downstream 280615 18809063 ~ 18863122 (-)
G257322 NA non-coding downstream 490422 18653093 ~ 18653315 (-)
LOC113530339 r3hdml non-coding upstream 10279 19158291 ~ 19178092 (-)
G257518 NA non-coding upstream 40665 19188677 ~ 19231641 (-)
G257595 NA non-coding upstream 248930 19396942 ~ 19397151 (-)
G257596 NA non-coding upstream 251575 19399587 ~ 19399842 (-)
G257604 NA non-coding upstream 283150 19431162 ~ 19431386 (-)
lrp1ab lrp1,lrp1ab,LOC108425568,LOC107593902,LOC107673053 other downstream 79155 18936577 ~ 19064582 (-)
LOC113530839 LOC108275928,LOC108425553 other downstream 612485 18509148 ~ 18531252 (-)
znf217 znf217 other downstream 843050 18285486 ~ 18300687 (-)
kcng1 kcng1,LOC107711602,LOC107590496,LOC107738482,LOC107558732 other downstream 1230460 17884243 ~ 17913277 (-)
dazap2 dazap2 other downstream 2272573 16852928 ~ 16871164 (-)
LOC113530570 NA other upstream 222675 19370687 ~ 19387041 (-)
LOC117599227 LOC108275551 other upstream 283438 19431450 ~ 19437634 (-)
magi3a magi3,LOC108275952 other upstream 335081 19483093 ~ 19621613 (-)
kansl2 kansl2,LOC107593923,LOC107716132,LOC107737532,LOC107591080,LOC107687436 other upstream 952987 20100999 ~ 20109212 (-)
LOC113530994 NA other upstream 955762 20103774 ~ 20103911 (-)

Expression


Co-expression Network