pa2g4b (pa2g4b,LOC108276026,LOC108425565,LOC107737517,LOC107593906,LOC107668344,LOC107591063,LOC107716155,LOC107673109)


Basic Information

Item Value
gene id pa2g4b
gene name pa2g4b,LOC108276026,LOC108425565,LOC107737517,LOC107593906,LOC107668344,LOC107591063,LOC107716155,LOC107673109
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 18829063 ~ 18836940 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920251.2
CCATCGGCCATCTTGGACGTTTAGACAGAATCGAGCGTGGTTACAActgaaggggggaaaaaagttccTCGCCGTACATCTGTCGactgaaagaaaatgtcagGAGACGACGACCAGCAAGAGCAGACTATCGCCGACGACTTGGTCGTCACCAAATACAAAATGGGCGCTGACATAGCGAACATGGCTCTGCGGGCTGTCGTGGAGGCGGCCAAGCCTGGAGTCTCTGTGCTCAGCTTGTGTGAGAAAGGAGACGCCTTCATCACTGCTGAGACGAGCAAGGTGTTTAAAAAGGAGAAGGAGATCAAGAAAGGTATCGCCTTCCCCACCTGTGTGTCCGTCAACAACTGTGTGTGCCACTTCTCTCCTCTGAAGAGTGACCCTGATTACACACTGCAGGATGGTGATGTGGTTAAAATTGATCTTGGAGTTCATGTGGACGGCTTCATCTCCAACGTAGCTCACAGCCTTGTGGTTGGAGCGACCAAGGAAGCTCCAGTGACAGGCCGGAAGGCGGATGTGATCAAAGCTGCCTACCTGTGTGCTGAAGCAGCTCTGCGGCTTGTTAAGCCTGGAAACCAGAACACTCAGGTCACCGAAGCCTGGAATAAGATCGCAGAGTCCTTCAAATGCACAGCCATAGAGGGAATGCTGTCCCATCAGCTGAAGCAGCACATCATTGATGGAGAGAAGACCATCATTCAGAACCCTACAGACCAGCAGAGGAAGGATCATGAGAAAGCTGAGTTTGAGGTGCATGAAGTGTATGCTGTGGATGTTCTGATCAGCACAGGAGAGGGGAAGGCTAAAGACTCAGGACAGAGGACCACCGTTTACAAGCGAGACCCGAGCAAGCAGTATGGGTTGAAGATGAAGACTTCGAGGGCGTTTTTCAGCGAGGTGGAGAAACGCTACGACACTATGCCTTTCACTCTCAGggCGTTCGAGGATGAGAGCAAGGCTCGGCTGGGTGTTGTGGAGTGTGCCAAACACGAGCTGCTGCAGCCTTTCACCGTCCTGCATGAGAAGGAAGgCGAGTATGTGGCGCAGTTTAAATTCACCGTGATGCTGATGGCCAACGGACCCCTGAGAATCACCAATGGTCCCTTCGAGCCGGAGCTCTACAAGTCCGAGCACGAGGTGCAGGATCCTGAGCTCAAGGCTTTGTTGCAAAGCTCAGTCAGCCGGAAGgcccaaaagaagaagaaaaagaagGCCTCTAAGACAGCAGAGAACGCCACAGGACAACCGATggaggaggagacagagacTGCCAAGTAGAAAAAGCCTCCTCTGCCCCCTACTGCCATTAATACTGACCAACGGAGAATAGAAGAGTCCCAACATGCCCCACTGAGAAGCCTCCAGCCTAGCCTTCTATCAGCCTGTAACTCTGTATGACAGCTATGAAGTCCACACATCAGTTTTGAGTTCGCACAGCTCGTATAGTCTGGTGACTTTAATAACACTGGCTTCTCTACAGGAGGTTACAGATGGGGAAGTGCTACATACCAACTGACTGCCTTTATTTACAGGGGCGCATGTTGAGTGGGGTTGCCCCtcttacaataataatatttttcttattaaactGTCATTGTAAAACCAATctcagaaaataaaagcaaagtggCGGCACCAGCGAAATATCCTTACTCCAGTGTGCCGATTATTCTTCCAAGCCTGCGACTCCTGTTTGAAAGTTTTAGCTTTTGTGATAAGTGACTGATCTATTGAGATAGCTTTTGTAGATTGTATGTAGACTCATAGCTGCTCAAACTTGGATATGATCCGATTCAGCAGTGATGGAAGTGTTATAAGCTGGAATGTGTTAGCAATATAACAACtgagtttattttgtatttttccccAGACATAGAAAAAGCTGACCTGTGTGTCTGGCCCTAAGAGCTAAACAATCCTGCCATTCTTTTATAACTTTCCAAAAGAATAAATGACCTTGGCCAAA

Function

symbol description
pa2g4b Orthologous to human PA2G4 (proliferation-associated 2G4).

NR:

description
PREDICTED: proliferation-associated protein 2G4

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920251.2 True 1969 mRNA 0.49 13 18829063 18836940

Neighbor

gene id symbol gene type direction distance location
erbb3b erbb3 coding upstream 2958 18786766 ~ 18826105 (+)
si:dkey-151g10.3 LOC108276398,LOC108425563,LOC107737519,LOC107673054 coding upstream 49406 18725277 ~ 18779657 (+)
fam3a fam3a,LOC102798212,LOC106567024 coding upstream 107903 18703452 ~ 18721160 (+)
LOC113530736 ssr4,ssrd,LOC108275523,LOC108425558,LOC106567025 coding upstream 177234 18646708 ~ 18651829 (+)
arhgap4a LOC108276165 coding upstream 184298 18623471 ~ 18644765 (+)
esyt1a LOC108276191 coding downstream 13543 18850483 ~ 18877346 (+)
LOC117599226 LOC108275925 coding downstream 133054 18969994 ~ 18971248 (+)
trnae-cuc_34 NA coding downstream 195977 19032917 ~ 19032988 (+)
rbms2b rbms2b,LOC108275993,LOC108425569,LOC107716168,LOC107737513 coding downstream 254070 19091010 ~ 19117563 (+)
r3hdml r3hdml coding downstream 324273 19161213 ~ 19165261 (+)
G257068 NA non-coding upstream 207758 18620249 ~ 18621305 (+)
G256899 bcas1 non-coding upstream 500807 18322069 ~ 18328256 (+)
G256851 zfp64 non-coding upstream 748731 18078167 ~ 18080332 (+)
G256852 NA non-coding upstream 751251 18076948 ~ 18077812 (+)
G256772 NA non-coding upstream 883964 17944895 ~ 17945099 (+)
LOC113530356 NA non-coding downstream 4813 18841753 ~ 18846347 (+)
G257127 NA non-coding downstream 54949 18891889 ~ 18936842 (+)
G257196 NA non-coding downstream 228914 19065854 ~ 19066133 (+)
G257199 NA non-coding downstream 280937 19117877 ~ 19118533 (+)
G257235 NA non-coding downstream 396063 19233003 ~ 19235261 (+)
LOC113530386 slc26a9 other upstream 1640686 17175701 ~ 17188377 (+)
itga5 itga5,LOC107599342,LOC107723722 other upstream 1704112 17071136 ~ 17124951 (+)
G256046 NA other upstream 2320683 16508025 ~ 16508380 (+)
LOC113530371 LOC108276302,LOC108443130,LOC107673205 other upstream 2432818 16363546 ~ 16396245 (+)
spo11 spo11 other upstream 2502449 16232013 ~ 16326614 (+)
fmnl3 LOC108276057,LOC108425567,LOC107716159 other downstream 42541 18879481 ~ 18934319 (+)
pkig NA other downstream 361486 19198426 ~ 19222559 (+)
G257622 LOC108276210 other downstream 641362 19478302 ~ 19478895 (+)
si:ch73-206d17.1 LOC108275771 other downstream 788589 19625529 ~ 19705063 (+)
G258096 hoxc6,hoxc6a,LOC107593966,LOC108433405,LOC107664205,LOC107714999,LOC103034651 other downstream 1553869 20390809 ~ 20398714 (+)

Expression


Co-expression Network