gss (gss,LOC107594436)


Basic Information

Item Value
gene id gss
gene name gss,LOC107594436
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 15125347 ~ 15140979 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920555.2
TTCACCAGATTCAGCATGTACATCagttttagtagtagtagtagcatagAACGAAACgggcttttattttgaaaatatccCGTGAAATGAATAACGCTGCGTCATTTCAGTTTTCACGTACTTTCAACGGTTCAGTCAGACTTGTTTAATGCACTTGGGACTTCCTCGCTGCCACAGCCACCAAACTGCACTTGAACCAGCACTCATAAGATTCACAAGAATCGTAGGAAAATAAGCAGCTTTCATTAGATAAACAGTTTTCACTTACTGGGTTGATGTCAATGGCTTCTCGTGGAATTCCAGAAGAGCTCTTAAGAAATGAGGTGTTAATTAAAGAACTGGAGGAAATTGCTAAAGATTCTGCACTGTTGCATGGAGTATTAATGCGCACCAAAGAATCACCAAACTCTTCAGAAgtggTGAGTTATGCACCATTCACACTCTTCCCTACCCCGGTGCCTACAGTACTCTTTCACCAGGCCCTTGAAATCGCCACCCATTTTAATCGGCTGATAGACAGAGTCAGTCAGAGTCCACGTTTCCTTGAGGAGGCTCTTGCAAGCACCATCAAGGTTGACAGTTTTACAGCAAAACTCTTCAACATTTACAGACAAGTTCAACAGGAACCTCGGGATACGCCAATAGTGCTGGGCTTGAATCGCTCGGATTACATGATTGACCATGCTGATGGAAAAGAGGCCTTAAAACAAATTGAAATTAATACTATTGCGGCCAGTTTTGGGGGTCTTTCCTCACGCACACCATATGTTCATAGGCACATTCTGAAGGTTGCAGACCGGTTGGAGGAAAGCAAACTCATCTTGGATAACAGTCCAGCAGCAGGTCTGGCAAAAGGCTTGGCATTGGCCTGGGAACTTTATGGCTCTCAGAGGGCCGTTGTGATGGTCCTAGTCGAGGACGTCCAGAGGAACATTTATGACCATCGATACGTGGAGAATGAGCTTTGGGCAAGAAACATTCGTGTAATAAGAAGGCAGTTTGAAGATGTGAGTAGAAGTGGATCTCTGGACCAGAACAAGAGactgtttgtAGATGGACAAGAGATTGCTGTTGTTTATTTCCGCAATGGATACATGCCTCAAAATTACAAATCGGAACAAAGCTGGGAGGCTCGGTTGATGATGGAGCGCTCGTGTGCTGTGAAATGTCCAGACATCAGCACCCATCTTGTTGGCACTAAGAAGGTCCAGCAGGAGTTGGCTCGGCCAGGCGTCCTTGAGAGCTTCTTTCCTGATGAGCCTGAAACAGTGACTCGGATTCGTGCCACTTTCGCCGGCTTGTACACACTGGATATGGGAGAGGAAGGGGACCAGAATGTGGCTATGGCTATGGCCAAACCAGACCTGTACGTCTTGAAACCACAGAGGGAAGGAGGAGGGAACAACATTTATGGGGATGAGATCTGCCGTGTGCTGGAGAGCTTGaagaacagcacagagagaaCCGCATACATCCTGATGGACAAAATCCAACCCCGGCCCACATATAACTACCTTTGCCGAAAGGGGGATCCAGTAACGCTGAAGATGTGCCTCAGTGAACTGGGTGTTTTTGGAGCCTACGTCAGGAGAGGAACAGAGGTGTtgatgaatgagtgtgtgggcCACCTGCTCAGGACGAAGTACGCGGAACATGCCGACGGAGGCGTTGCTGCAGGAGTCGCAGTGCTCGACAATCCCCTACTGATTTAAGTCTCAGGAGCAGAACTCTACACTGACAAACATATCcaggttttattttatagctaTATATGCTTTTATGTTCATTCCTCTTTTAGCACTTGGCAGGAGAAAATACACTCGATTCATTGAAGCCTGTGATTTACAGTTATACATTCCCTCTGAAGATGCTCACTCTGGAAGGAAATTCTGAACTGAGCTACTGCCTGCcataagattttattttttttttaagtttaaaaaaaactgttgtctAAAATGATCCTTGTCTTAGAGTAAAACCACCCTGCACATTTTGAATCAAGTGATTCGGAGCagcgggaaaaaaaaatttaaaaaaatatgcagagtggaggtactccaggaccagcaTTGAGAAAAAGTGATCTATAGTTATCTACTGAAAATGCCCACTTCTGATTTCAATAGAGCTATCAGAACTCTCCACTACTGTTActattgatttttaatttaaaatcagtGACCCAAATAGCTAAACTTCCTACATAACCAGAGTGTCAGCAACTCAACCTTGGATCACTTAAAAGGCAAATGCTTATAGGCCATCTCACTGCAAATTTCCAAGTTTGGGAAAACACTGGATataatgtaaagaaaatgtattttacagtttttctcagTCGCTTTGGTACATTTCGCAAATCATCCTTAATATTTGCAAACCAGTATGTGCATTTCTCAAAACAATACATACAAACAGCACCACACAATGGATTTCCTGCAAAAGCATGTAACTTGCTCAAAATCTTTAGTTCATCTCTCAAAAGTAAGTATTTGTCAATGAACATATCAGTGCCATCAGAATGAAAAGTACTTGTCATTGTTCACAAACAAGATAGTCAAAATGTTTAGTCATGTTGTCAATGTAACAGTGTAGTCTGTCAGTATTACCTGATGTGAGCTATGGCTACAGTTTGGATGACAGTTACTACATTGAATATGCACAAGGCTTCACTTCTTCTGTTTGGCATATATCAATTTCTACAGTACAAATTTACACATTACTGTATGTGGGATATTGATTGAAAGAGACTGGACAGGATTCACAGTTATgcttttcactagtggtctgacaaaaaaaaattacattacaatGTCATTGTGAttatagaaaacaaaaagacaagGGGCACaaaggggaaaataaaaaattagaaagGTAAACACAGGAAACACCCCTTAGGCAGAACTTTGCATTTGCATGCAGCACTGTATGAGGAATTACAGTGCAGTCTGTCTCCACCTCCTGACGTCCCAGTCTGTTGGGCCACAGGTTCTCATCCACATCACAACAGCTATCTTCCCTTGCAATGCAACGTGGAAGAAAATCTTTTGGAACGTCTTATCCAGCCTCTGCAGGTGTCTTCCGTGATGTTCTCACATGCTGCATCCATGGCAGCCAGCAGGGTCATCTGAGTATGTGGCTGGCGATCATAGACCTTCCACCTCCATGCTGAGTAGAACtcctcaattgggttaaggaaTGGGGAATAAGGTGAGAGGAATTCCATCAGCATCCTGTAGTGGGTCACAAAGGGGAATATGAGTTAGCACACCGTGCTCTGAAATAGCAGCACACACAGTGATATTCCCTCCCCGTTGGCCTGGCAAATCAACAATAGCTCTGTGGCCGATGACATTTCGACCACGCCTTCTGCTTTTGGTCAGGTGGAAGCCAGCCTCATCCACTTTATATGAAGTTGTGAGATGGTTCACTTGATTCCAGTTCCATTATACACTATATCCCAGAACACACAAAATTAGTTTTATGAATTacatgcattttcattttggaTAAGATACAGTTACATCAAATTTATTCATACTgcatgttctttcttttctacaGCCATGGAAAATGTGTACAGGTCATGCTTACTGTACTATATATCACTATACAATGTTGCTGTAAAGTAGTTACTGTGTGCACATAGATGTTTTACCTGGACATACTGGTACCGTAGCTCCTTCAGCATTCGTCATCATTCCTTTCGAATGGTACACGGTACAGATGTTTCATGCTCATGTGGTGTCAGATTGGATGTTTTCAAAGTCTTCTATAATGTTACTCTATATCTCCCTTAGTCTAATGGCATGGTTTGCTCTGACCATGGTGCAAATAGCCTCCTCTTGTTGAGGTGTGAAAAGGGGTCCTCTGCCACCCATGTGAGGTAATCTTGCAATCTTATGTGGGGAAAAATGCAGTAATGCAAAACACACGATttttcacactgaaaaaaaaaaaatgagcacacacattttacagatTCAAGAAATGTACCAAAAGTGACTgagaaaaactttaaaaatacatgCGTGTTTGTGTTGCAGTATGTATCTGTATAAAGTATATTTGCTGTATGCTGTAAAATACAACTGGACTACTGTAATATGAAGTGTTACAgtaagtatacagtataacagtaCATTGCTCATTGGTGGACATACCTGTTCTCTGTACAAAATGTTTGAATTATTGAGGACACGGTCCTTTCGACCCGCCTCAGCCATTGTAAGGCCATGATTGACAACATGGTCCACAATAGTGGACTTTATTTCATCTGATATGCGCCTGTGTCCTTGGCCTCTTCTGCCTCTTCCTCTGTTTTGCCTCCGTACCCTTTCACCATGCATCCTtactcctcttcttcctctcggCTGTTGACCCTGTTTGTTTCCTGGTTGTTCATCCATTGTCAGAAGTTGTAACTCTGTGTTGTGCTCTGTCTGTGTGCTTGCCAGTTGAAGGTTCATGAGATGCACCTTTGAGCTGTTTTAGAGAACTAGTTGATCATTGGTTgatctaacactttacattcCCTTCATTAGTGAAAGTCAAGATTCACCTGCACAATTCATCAATTCAGGGCACAATTTACCAAAAGTCTAATAGAAATGTGTAGAAAACTTGACAGTTTGACAACTAGTTCAACCATTTTGCATTTAATGACTTCTGCAAGGAACTAATGCCTAGATGTTTTGAGGGGAAGCctattcaacaaaaaaaaccatataatatattttgatcAACATGACATAAGCAATTGATAACGTAGGAAACAGAAGACACCTGTACATAAtcaattgcatgaatgtacCAAAGCATTTCCAATTTGTTCAAAAGAATGAGAAATTGCTCTTATGATGTGCACAAGTGATTAGATGATATGGAGTTTGAACAAGTAGTTTTGAGAATTTCAATTGTGATCTGAGAAATGCACCAAAGTGACTGAGAAAACCTGTAATATAGAAGAACTGTAAATGATGCATTTTGGCAAAAACATACTATTTCTGggattttaattaatgatcAAGAATGATTAATCAAAATTTACtcagaaattaaacaaattctCATCACCAAACTTGCTGAGAACAAATCTAATTTatgcatttgtaatattttaatggcAATATTTTGGTAGAACATATTGTACTTTACTAAaataatgatttcttttttctaattCCCAACAGTGCCAACATATatcatgtaaaagaaaattatgtaatttaaaacaaatacacaaatgctAGTCCTTCTGatattataaagtttatatGGATGTAATTTAATCACTTTCCATTCATATAAATCGTATTTTCCTCATAGAGCCTGTCAAACATAAGCTACATATCCATCCACGCAATCACGTGTTTCACGCTCTGCTGATAACGGTGAACTTCAGACACATCACAAAAATGTTTCCAATAAAGTAAGACTGTACAGAGGACGTGGAAAATATCAACCCAAACAGACCagtgaaaaaaatctgagtGGTTGTTTCTGGAAAAGGCCAACTGGGTCCTGaccaactgaaaataaagatcaaaagcaaaagacacaaaaaactgtaaaagtgaAACTGCACATTTATAGGCTGTGTAGCTTAATTAGGGCCAGACAGTAAGGCCAGACTGACACTAAGAGTGAGGACACAGGCAAACACAAATAAGCAGTCTGTCAGAATGTGCAGGACAAgaccattttaaaatgctaaacaaacaaactcactAGTTtgttttgagagaaaaaaaattttgagaGAAAATGTGTAGGAACATATTAAAAGCATTCTAACTAACAATAGAAAAAACTGAGGCAAAACACTGATAGGTTCTGACTACTGTTGTGCTAAAATAAGTGATAAAGGATGTGCTTAATGCAAGGCTACAGAAAAGTTGATGGAAAATTAAAGCTGCATTCTGTGAGATTTAAACACTGCATcctatttacaataaaatcaGAGATGTTTCTTTCGAA

Function

symbol description
gss Predicted to enable glutathione binding activity and glutathione synthase activity. Predicted to act upstream of or within glutathione biosynthetic process. Predicted to be active in cytosol. Is expressed in head kidney; lens; pronephric duct; and solid lens vesicle. Human ortholog(s) of this gene implicated in Alzheimer's disease; glutathione synthetase deficiency; and hemolytic anemia due to glutathione synthetase deficiency. Orthologous to human GSS (glutathione synthetase).

NR:

description
glutathione synthetase

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004363 glutathione synthase activity molecular_function

KEGG:

id description
K21456 GSS; glutathione synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920555.2 True 5985 mRNA 0.40 13 15125347 15140979

Neighbor

gene id symbol gene type direction distance location
acss2 acss2,LOC108438110,LOC107666475 coding downstream 8721 15093797 ~ 15116626 (-)
osbpl2b osbpl2,osbpl2b,LOC107727008,LOC107681391,LOC107666451,LOC107705692 coding downstream 122670 14981346 ~ 15002677 (-)
adrm1 adrm1,LOC106534082,LOC103354471,LOC105894265,LOC107727009,LOC108276396 coding downstream 146059 14973016 ~ 14979288 (-)
slc16a7 LOC108276076,LOC108429289 coding downstream 278332 14840288 ~ 14847015 (-)
zgc:171775 LOC108276094,LOC108429287,LOC103042110,LOC107705698,LOC107666627,LOC107559857,LOC107551519,LOC107727002 coding downstream 376752 14741169 ~ 14748595 (-)
si:rp71-79p20.2 LOC108275774 coding upstream 46419 15187398 ~ 15257751 (-)
birc7 LOC108275549 coding upstream 199017 15339996 ~ 15357857 (-)
lmod3 lmod3 coding upstream 271191 15412170 ~ 15451350 (-)
zbtb46 zbtb46,zbtb24,LOC106676336 coding upstream 314539 15455518 ~ 15561114 (-)
LOC113530990 NA coding upstream 346778 15487757 ~ 15487859 (-)
G255306 NA non-coding downstream 246841 14875644 ~ 14878506 (-)
G255020 NA non-coding downstream 592759 14530825 ~ 14532588 (-)
G254567 NA non-coding downstream 1424942 13700009 ~ 13700405 (-)
G254600 NA non-coding downstream 1428727 13692797 ~ 13696620 (-)
G254599 NA non-coding downstream 1459874 13664893 ~ 13665473 (-)
G255403 NA non-coding upstream 39407 15180386 ~ 15180640 (-)
G255385 NA non-coding upstream 41178 15182157 ~ 15227960 (-)
G255435 NA non-coding upstream 191147 15332126 ~ 15332451 (-)
G255506 NA non-coding upstream 313154 15454133 ~ 15454354 (-)
G255693 NA non-coding upstream 511868 15652847 ~ 15657703 (-)
G255071 krt8,LOC108411779,LOC100304655,LOC107551542,LOC107681390,LOC107705700,LOC107666368,LOC102212080,LOC102292851,LOC102776167,LOC101486263,LOC103367855,LOC107391340 other downstream 421077 14699272 ~ 14704270 (-)
LOC113530423 LOC108276099 other downstream 974766 14128963 ~ 14150581 (-)
oprl1 oprl1,LOC107681404,LOC107727003,LOC107666560 other downstream 1841462 13251140 ~ 13283885 (-)
plagl2 plagl2,LOC107690855,LOC107681868,LOC107559482,LOC107747490,LOC107558237,LOC107707758 other downstream 2191039 12897474 ~ 12934308 (-)
ptk6b LOC108276246 other downstream 2957552 12155728 ~ 12167795 (-)
LOC113530775 NA other upstream 117506 15258485 ~ 15317365 (-)
znf512b znf512b,si:dkey-256k13.2 other upstream 517357 15658336 ~ 15820241 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other upstream 1506844 16647823 ~ 16695031 (-)
si:ch211-210c8.6 NA other upstream 1646822 16787801 ~ 16838649 (-)
dazap2 dazap2 other upstream 1711949 16852928 ~ 16871164 (-)

Expression


Co-expression Network