Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC113530553 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23483725 ~ 23486524 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026920690.2 | True | 846 | mRNA | 0.43 | 6 | 23483725 | 23486524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113530554 | NA | coding | upstream | 2955 | 23477194 ~ 23480770 (+) |
| LOC113530412 | NA | coding | upstream | 20119 | 23460595 ~ 23463606 (+) |
| LOC113530919 | NA | coding | upstream | 33013 | 23447629 ~ 23450712 (+) |
| LOC113530555 | NA | coding | upstream | 40100 | 23440496 ~ 23443625 (+) |
| LOC113530918 | NA | coding | upstream | 50069 | 23422194 ~ 23433656 (+) |
| LOC113530973 | NA | coding | downstream | 1986 | 23488510 ~ 23494390 (+) |
| LOC117599230 | NA | coding | downstream | 18667 | 23505191 ~ 23506978 (+) |
| LOC113530383 | NA | coding | downstream | 21015 | 23507539 ~ 23509653 (+) |
| slc10a7 | slc10a7,LOC107725722,LOC107752196,LOC107694411 | coding | downstream | 24079 | 23510603 ~ 23521815 (+) |
| otud4 | otud4 | coding | downstream | 43970 | 23530494 ~ 23546073 (+) |
| G260011 | NA | non-coding | upstream | 9281 | 23473913 ~ 23474444 (+) |
| G260009 | NA | non-coding | upstream | 14668 | 23468826 ~ 23469057 (+) |
| G259978 | NA | non-coding | upstream | 121435 | 23344862 ~ 23362290 (+) |
| G259968 | NA | non-coding | upstream | 134788 | 23332680 ~ 23348937 (+) |
| G259962 | NA | non-coding | upstream | 175133 | 23307755 ~ 23308592 (+) |
| G260074 | NA | non-coding | downstream | 40904 | 23527428 ~ 23562384 (+) |
| G260083 | NA | non-coding | downstream | 68072 | 23554596 ~ 23555077 (+) |
| G260222 | NA | non-coding | downstream | 340368 | 23826892 ~ 23827631 (+) |
| G260223 | NA | non-coding | downstream | 375118 | 23861642 ~ 23862570 (+) |
| G260217 | NA | non-coding | downstream | 381127 | 23867651 ~ 23869556 (+) |
| G259993 | NA | other | upstream | 94411 | 23387538 ~ 23389314 (+) |
| LOC117599309 | NA | other | upstream | 100072 | 23371744 ~ 23383653 (+) |
| LOC113530514 | LOC108275916 | other | upstream | 803183 | 22671398 ~ 22680542 (+) |
| LOC117599233 | NA | other | upstream | 1941298 | 21538045 ~ 21542427 (+) |
| si:ch73-290k24.5 | LOC108275473 | other | upstream | 2244726 | 21228320 ~ 21238999 (+) |
| G260415 | NA | other | downstream | 545703 | 24032227 ~ 24032724 (+) |
| G260483 | LOC108275756 | other | downstream | 782053 | 24268577 ~ 24269267 (+) |
| rnf146 | rnf146,LOC107751835,LOC107599252,LOC107697902,LOC101069158,LOC107735261,LOC106571496 | other | downstream | 914060 | 24400584 ~ 24453538 (+) |
| ddx58 | ddx58 | other | downstream | 1138413 | 24624937 ~ 24636129 (+) |
