slc17a9b (slc17a9,slc17a9b,LOC107563661,LOC107560897,LOC106566596)


Basic Information

Item Value
gene id slc17a9b
gene name slc17a9,slc17a9b,LOC107563661,LOC107560897,LOC106566596
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 12068589 ~ 12083533 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920758.2
CTGCGTGGctaaaagagagcgagagagaaaaaaatagctgaCACGTGGATTAGCAGTAATCAGGAAAAGCGAGAATTACTCGTCCGGCATCTCAGGCAGCAGATGAAACTGTCCAAGTGTATGTTTTTGCGCTCCACGACTCAAGAGAGGCTGAGAAGCCATTCAGAGATGATGTTAGTGCGATATAAACGCGAGCCACAGACTATTTTAACGCCTTTTTGTCTTCTCGCACTGACGAACTGAACTCGACACACCTCAGGAAGAAAGGCTCACCTCATACATAGGCACAAGGGCAACTTCTTGTTGAATGGCAATTCTACAAAAACATGGCAAGAACTCCAGTCCAGACCTGGCCAGTGTTAAAGACAGTCCGGCGGATAATTTCGAAGGAGTTGGACATCAGAAAAAGTGGCCCGAGTCAAGTCAGAACTGGTCCAGGCCGGTAGCGCGGATATGGACAGTGGTGCTGCTGTTGGGAACATGTCTGCTGTACTGCGCCCGCGTGGCCATGCCCATCTGTGCCGTGAGCATGGCAGAGCGCTTCAGCTGGTCCAAGAGGGAGTCAGGCATGGTGCTGGGCAGCTTCTTCTGGGGCTACTGCTTCACTCAGGTCCTCGGTGGCTACATCAGTGACAGGGTGGGAGGAGAAAAAGTGATGTTGCTGTCAGCTACAGCATGGGGAGCCATGACAGCATTCACGCCCATCCTGGCCCACTTCTGCTCGCAGCCCATCGTCTCCATGACCGTGTCCCGCTTCCTCATGGGCCTCCTGCAGGGTGTTCACTACCCGTCTCTGGCTAGTCTGTGCTCTCAGAAAGTGGTGGAGAGTGAGCGCGGTTTCCTCATGAGCACTGTAGGGAGTGGCTCGTATCTGGGgaCGTTGGTGATTGGAGGAGTAGGCTCGCTCATGCTGGATCTGTATGGCTGGGAGAGTGTGTTCTACGTCTCCGGCCTCCTGTCAGTTCTTTGGGCCTACTGTATGTGGAAATACCTGCTCAAAGGAGAAGGTCCCATCATTACACTGGAATCACTGGGCAGCGCTGGAACTCAGTCCAAACTGTCCCGAAGAAACTGGCTGCGTCTCTTCAGACAACCAGCTGTGTGTGCGGTCATTATTACACACCTGTGCACCGCTAGCACCTTCTTCACCCTGTTGTCATGGCTGCCGACTTTTTTCAAGGACACCTTCCCTGATTCCAAGggtTGGATATTTAATGTGATCCCATGGCTTGTGGCCATTCCCTCCTCACTATTCAGTGGCTGCCTGTCTGATCACCTCATCAGTCAGGGGTTTGATATTGCTTCAGTGAGAAAGTTaatgcagttctttTCTATGGGAGTATCCAGTGTGTTCACACTGTGTCTATGTGGCACCACTACGTTCCCCATGgctgtggcctttgtgtctgcTACTATGGGCCTGACCACCTTCAGTCACAGtGGCGTATCCGTTAATGTTCAGGATCTTGCACCATCCTGTGCCGGTGCTCTGTTTGGTGTGATGAACACTTGTGGTGCATTTTCAGGGGTGATCATGGTGTATTTCTCGGGCTATCTGATCGAGACCACAGGGTCGTGGGCGTCGGTTTTCGCCCTCATCACCGTAGTGAACCTCTTGGGATTAGGAATGTTCCTGACGTATGCCGAGGCACGCAGGGTCGACATCGAAGCCATGAAGGGACGCTATCACAACATACATATCTGAGCAAACAGAAACTGAACAAAATCCGTTTTAAAGGACGTGTCCTGCAGACTGAGACACTACGGATTTTGGAAGGACAGTCTGCACTAGAATTTCCATCCCCACTGTCACCCCTTTGGCGGGATCCGGCAGCAGTTTGGCTTTATAGGTTCAGAAGCCAGCTCCACCAGTATTTCAGTATTAGCTTTTCTTCTCCAGTGTCTCACAGTTCTGATGGGACAAGTTACTGAAAATATGAAGATGGCTGTAGTAGTGTAGCCTAATATGAAGTAAAGTAATATACAAAGACTGAAAACTAAATATAATGACTACACATTTTGTTGAGTGTAAAGATGCATAGCCTTTGTCTTCTGTTTCATTCATTCCATCATCCGTTCTGTAATTGTTGTTGAGCAGCTTGGCTTGACAAAACTCaggcatcatcatcattgtgaTCATTAATGATCATTATTGTCTatggaggattttttttccaccatgtttTCCATTGCTCTTGCTTACCATTTGCatccattttcatttaattcagtGGATGAAGACTAAAGGCCAAAGATAAACAAAGTTGTTGATAATTTTTCAATTCATATCATATTATGAATATTGCATGATGTCCAGACCCTAAATCATTCCCATGTTTAACATTTCATGATACACATCTCATGCTTTGTTCTTCAATCAAGTACCAAAGCCTTTACAAGCTGCTTTTGCGAGGTAGTTGATGTTTGCAACAAAGTTGAGCACTTACCGATGAGGTTTGATGTTTCTAGGAAAGAAGCAGCTCTCCTTAGCCTTACAGCACTGTgtggatagagagacagagttgTTCTAGTaggacaggaagtgaggttACAGTTAAGGAAAAGTGGCAACAAGTGAACGGTGGATGTTTTAATAGTAATCTTCAAGGaacctctttctcttttctcctgtgGTTAACAATGATTTATATCTTACAAGTATTTATTTGGCAGACTCTATCATCCAAAGTGGTTTAAGAATAGGCAGAGTACAAACAAAGTACAGAGCTGAGCACTGTGAAGTGTCTTGGTCAGCGGTCCAACAGTGTTTCGGTGGAATTCTGGGAATTCAAACtctcaaacttttggccacTAGCACAGAGCCACCACTTTCCACTGTCGCTGTTAaatgtgcatttgtttgttgGAAGAAAGAAAGTCTTTGGACAGTATGGACAATATAGATTTTGAAAAATCTTTATTGTAAGAACTGTGAATGTTAACTTCCTTTAGTAATGACGTCGTTTTTCAAATGGTTTAGaccaaatatattttgtattccagtcaaatgtatttattattgtggttagcagcagatctttatatatatatatcaagaaCTGTCAAGTGAATTGCTTCTGTCTACATGTGTCTGATCATTTTAATGACGCTTTAAGTGACACTTTACTTTAAAATATCTGACACGGTAACTAAAGACATGAAGCTGAGTTCTTATCCACATCATCACCATTTCAATGAAATAGTTGTAGCTTGTttattatatacttttatatataataattatctatgataatatgttatatactaccattttttcttccttttttcatttaaaaaaataagtctgATCAAGGAAGCATTCATGTGGGGCTTTAGTTACCGAGTTTGGCTGTTTTAGGGTGAAATATCACTTGGAGTAGCTtgaagctgtttatttattctgttcCTTGAGGCCTGTAGTGAGATTATGGcagcaacatttttttatacagttttctAGCATGTGTTTGTCTAATGTGGAAAAAGCACCTTAACAGCAACTTTGCTTAGTTTCTTGGTCAGAAAACCTGACTGAGTGATTTAAGTAGAGAACTAGGAGAAGAGCTAGAAATTCATTTAATCAGATACGCATAATAATCTAAACTGAAAAAGTTCCTGAAAAGCATCTTCTTGCTGCACCATGCCTTATTGTGCTAAGCTGATTCCCATCAAGaaaaagcttaattttttttttaacaaaactgttTATTGCAGCTGACAAGATTGTGCACAAATACATCATATTCACGAAGGATTTCAagtgcattcttttttttttttttttttaattttttttttatacatagaCCAGACATATgtgtaacagaaataataataatatatacatccAAGAAGTTCAGCTGTTAAAGTCAAAATCTACTTAAGGTGTAACTCATTTCCAAATAATGTGTCGTGTCTTGTACTGTGTTTTATAACTGCTTATATTAAATGTTGGCATTATGTTTGGAGttcaaaataatttcatataatttcaTCAGTCGCCTGCAAAACACTGAGTATTTACATTGTTTATCACATGTTTAATTCAAGATCATATTCTGTGAAAATATGAatcagcattcattcattcattcatattgtGAGTCATCCTGACTAAATGCAGTTTTCTGAAAGTATAAAGCTAAGAGATTATCTTTGaactatttaaaatgaaaatgactgaaaagaAATGTAGTAATGCAATATTCTCCTGCTTTAGAAAACATGCAATTTGTAAACCttttgttcaaaaataaaactatattttatCAAGTGTAA

Function

symbol description
slc17a9b Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including anterior axial hypoblast; axis; cranium; hatching gland; and polster. Human ortholog(s) of this gene implicated in porokeratosis. Orthologous to human SLC17A9 (solute carrier family 17 member 9).
slc17a9 Enables ADP transmembrane transporter activity; ATP transmembrane transporter activity; and guanine nucleotide transmembrane transporter activity. Acts upstream of or within ADP transport; ATP transport; and guanine nucleotide transmembrane transport. Predicted to be located in secretory granule. Implicated in porokeratosis.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K12303 SLC17A9; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920758.2 True 4278 mRNA 0.41 13 12068589 12083533

Neighbor

gene id symbol gene type direction distance location
rnd1a rnd1a,LOC108275558,LOC103027302,LOC108435239,LOC105906806,LOC107657046,LOC107737660,LOC107563659 coding downstream 136094 11926906 ~ 11932495 (-)
prim1 prim1,LOC107741309 coding downstream 152605 11907926 ~ 11915984 (-)
naca naca,LOC106571941 coding downstream 168127 11892151 ~ 11900462 (-)
LOC113530993 NA coding downstream 175587 11892927 ~ 11893002 (-)
LOC113530992 NA coding downstream 176169 11892348 ~ 11892420 (-)
gid8b gid8b,gid8,LOC108276161,LOC107560896,LOC108231957,LOC107391203,LOC105906441 coding upstream 452 12083985 ~ 12087721 (-)
trnae-cuc_33 NA coding upstream 57569 12141102 ~ 12141173 (-)
zgc:194282 srms,LOC108276248,LOC108435233,LOC107657057,LOC107747981,LOC107672012,LOC107560891 coding upstream 84994 12168527 ~ 12185778 (-)
nol4lb nol4l,nol4lb,LOC107563666,LOC107672011 coding upstream 104261 12187794 ~ 12285570 (-)
commd7 commd7,LOC107671961,LOC107603136,LOC107747977,LOC107719919 coding upstream 222620 12306153 ~ 12316352 (-)
G253538 NA non-coding downstream 163903 11904277 ~ 11904686 (-)
G253509 NA non-coding downstream 290656 11777718 ~ 11777933 (-)
G253492 NA non-coding downstream 310659 11755205 ~ 11757930 (-)
G253499 NA non-coding downstream 324431 11743950 ~ 11744158 (-)
G253494 NA non-coding downstream 353836 11712997 ~ 11714753 (-)
LOC113530483 NA non-coding upstream 60100 12143633 ~ 12150945 (-)
G253749 NA non-coding upstream 133891 12217424 ~ 12217744 (-)
G253843 NA non-coding upstream 308830 12392363 ~ 12393653 (-)
LOC113530910 NA non-coding upstream 523008 12606541 ~ 12607682 (-)
G253977 NA non-coding upstream 577711 12661244 ~ 12709317 (-)
LOC113530816 LOC108276066,LOC108276064,LOC108276065,LOC108275619 other downstream 209243 11838796 ~ 11859346 (-)
avpr2ab avpr2,avpr2ab,LOC108275514,LOC106567019,LOC106572707,LOC108436342,LOC107672000 other downstream 499986 11549394 ~ 11568603 (-)
LOC113530309 NA other downstream 605883 11456020 ~ 11462706 (-)
abhd6b LOC108275644,LOC108436291 other downstream 1043580 11020531 ~ 11025009 (-)
LOC113530950 smim4,zgc:193598,LOC108436318,LOC108276132,LOC107570281 other downstream 1052923 11009463 ~ 11015666 (-)
ptk6b LOC108276246 other upstream 72195 12155728 ~ 12167795 (-)
plagl2 plagl2,LOC107690855,LOC107681868,LOC107559482,LOC107747490,LOC107558237,LOC107707758 other upstream 813941 12897474 ~ 12934308 (-)
oprl1 oprl1,LOC107681404,LOC107727003,LOC107666560 other upstream 1167607 13251140 ~ 13283885 (-)
LOC113530423 LOC108276099 other upstream 2045430 14128963 ~ 14150581 (-)
G255071 krt8,LOC108411779,LOC100304655,LOC107551542,LOC107681390,LOC107705700,LOC107666368,LOC102212080,LOC102292851,LOC102776167,LOC101486263,LOC103367855,LOC107391340 other upstream 2615739 14699272 ~ 14704270 (-)

Expression


Co-expression Network