LOC113530632 (g6pd,LOC108276043,LOC108441407)


Basic Information

Item Value
gene id LOC113530632
gene name g6pd,LOC108276043,LOC108441407
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 19795054 ~ 19803145 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920801.2
GCTCCGCGTGCGGCGTGAGTGAGTCACATGTATAGTGTCCTCTCGCGTGCTGTTATAAACCAGTTTATTTTACTTGTATGCTAGTTTATTAACTAAAATATTGAATGTAAGCTTAAAAGAGAACTATTTGTCAGCGTTTGTAGCCAgttgctagcttgctaacacCTATTAATCTCATGAGCAGGCCTGAAAGCTATAGCGGCTCACGGATTATCTCCAACGGAGAAGCTGAAGCGTTTCTACCGGCCCGTTAGTGCAGCAAGGTGATCGCTTGTCCTGCTCGTTATTAGGAGTATGAGCTCGTTAGCTCGCTCTCGGTCCGAGGTGTTTGGAGAAATCCGGAAGGAGCTGTATGATGACCATGAATTTCGACAGGTTACTCATGTCTTTGTTATCATGGGCGCCTCGggGGATCTTGCCAAGAAGAAGATTTACCCCACCCTTTGGTGGCTCTTTAAGGATGGACTCCTACCAGAGGAGACCTACTTTGTTGGGTTTGCGCGTTCCCACCTGACCATGGATGACATCCGGGCTGCCTCTTTACCGTACATGAAGGTTAAAGATGTGGATAATGAGCGTCTCTCAGCATTTTTCCAAAGGAACTCTTACCTGGCCGGACACTATACAGAGGGAGAATCTTTCTCACAGCTGCAGTCCCACCTGAACTCTTTGTGCCATGGTACAGGTGCCAACTACATCTTCTACCTGGCATTGCCACCCACCGTCTACCACAACGTCACCTCCAACATTCGCCAGCACTGCATGAGCAACAAgGGTTGGAGCAGGGTGATTGTGGAGAAACCGTTTGGCCGGGATCTGCAGAGCTCAGAGGAACTGTCAGCACACCTCTCTTCCCTCTTCACTGAGGATCAGATCTACCGCATAGACCACTATCTGGGCAAGGAGATGGTGCAGAACCTCATGGTACTCAGgtttgGGAACAGAATTTTCGGCCCTATCTGGAATAGGGAAAGTGTTGCCAGCGTTGTTCTCACTTTTAAAGAACCCTTTGGAACTTATGGGAGAGGAGGATACTTCAATGACTTTGGTATTATCCGTGATGTCATGCAAAATCATCTTCTCCAGATGCTCACCCTGGTTGCCATGGAGAAGCCTGCTTCCACCAACTCGGATGATGTGAGAGATGAGAAGGTGAAGGTATTGAAGTGCATAGCACCAGTGGCTCTACATGATGTTGTGTTAGGGCAGTATGTGGGAAACCCTGAAGGGGAAGGGGAAGCTAAACTGGGTTACTTGGACGACCCCACCGTTCCCAAAGGCTCCCACACGGCCACTTTCGCTACTGCAGTGCTCTACGTCCATAACGAACGCTGGGAAGGGGTTCCCTTCATCCTGCGCTGTGGAAAGGCCTTGAACGAGCGCAAGGCTGAGGTGAGGCTGCAGTTCACTGATGTGCCAGGTGACATCTTTAATGCACAGTGCCAGAGGAATGAGCTGGTGGTGCGTGTGCAGCCTGATGAGGCTATTTATGCCAAAATGATGAGCAAAAAGCCTGGAGTGTACTTCAACCCCGAGGAGACAGAACTGGACCTGACCTACCGTAGCAGATACAAGGACGTGAAGCTTCCTGATGCCTACGAGCGTCTAATTCTGGATGTGTTCAGTGGAAGTCAGATGCACTTTGTGCGCAGtgatGAGCTCAGGGAAGCCTGGAGAATCTTCACTCCTCTCCTCCACCAGATGGAAGCAGAAAGGACACAACCAATCCCTTACACATATGGAAGCCGTGGACCTAAAGAGGCAGACGAGCTGATGAAGAGGGTGGGATTCCACTATGGAGGAACGTACAAGTGGGTCAACCCTCATCCCATGCAACactccaatcactgatcattgaTTAAGACTTAAATTGCCAAAGAGAATCAAGCCCAAATTCAGGAGATGAACCTGTTAATCAATGAAAGTGTTAACTCGCCATGTACACGAGATTTCTATTTTCTACAAATTAGCTTTTTCCCCTCTGTGAATGTTTTGTACAATTGGGAACGTGTTTacagctactttttttttcccaaatcaTGATTGATTATGCTCCATACCTCTTCATTTAGTGGTAATGCTTCTCTTGACTGTGTTGTTTGATTTGATTGTAATTTGCAAGCTCtcattttcatctctcttttcAATCTTTGACCAAATCAAGGCACAGTAAATTTTAGTTAAACTATTCCATGCAATGAGCTTCACCTTCCTTATTTTTCCTCATAGAGTGACGGGAACAGCAAAATGTAAGCACAATTCTAGAAATGGTGTTTGCTGTGGTGTGTAGCAGTGGTTTATGAGTTAAAAGCAAAAAGTTCACTATTTTATATAACTTTTGcagtattattataatagttTTGCTGCTGcatttgtacagtatatatgttaCAGTATTTTAGTGGACTAGCCCTTTTTGAGCCCTATGTGTATTATTGACGTGTTCAAATCAATACAGGGTTTTTCCCAAAAGCTAGGAAGGCTAGTTTAGTTTTCAGACGTGTATGCAtgggtgtgtgcatgggtgtgtggCTCAACAAACTGCCACACACGGTGAGTCAGCAAGGTATAACAGAGTGCAATATACTGATTGGatgccattctgtgtaaaattttCCAACCTGCTATAAATCACTTAATCTTCAAGCCAGGCCAGGTCCGGTCTGGACACATTGCAATCAGTGTTCACATCTTCAAACATTGAGTGTTTTGAGACGTGTCACGTCACTGACCCTTCTGGTTGTGACTCTTGCTCTCAGGTACATGGCCTAGCCGGGGGGAGTGTTGTCACTCAGCTCGGAGGATAAATCAGTGGTGTGGTATAAACTGGAATGTGTTAAGTGGATAAACGCAGTGTTAACAACAAGCTGGAATGTGCTGCAGTCATCTACTTGTATGTTTTCCTATACTTCTGAGTTCagtcttaaattaaaaaaaaaaaaaaccatttcatacctaaaattttttt
>XM_026920803.2
GCTCCGCGTGCGGCGTGAGTGAGTCACATGTATAGTGTCCTCTCGCGTGCTGTTATAAACCAGTTTATTTTACTTGTATGCTAGTTTATTAACTAAAATATTGAATGTAAGCTTAAAAGAGAACTATTTGTCAGCGTTTGTAGCCAgttgctagcttgctaacacCTATTAATCTCATGAGCAGGCCTGAAAGCTATAGCGGCTCACGGATTATCTCCAACGGAGAAGCTGAAGCGTTTCTACCGGCCCGTTAGTGCAGCAAGGTGATCGCTTGTCCTGCTCGTTATTAGGAGTATGAGCTCGTTAGCTCGCTCTCGGTCCGAGGTGTTTGGAGAAATCCGGAAGGAGCTGTATGATGACCATGAATTTCGACAGGTTACTCATGTCTTTGTTATCATGGGCGCCTCGggGGATCTTGCCAAGAAGAAGATTTACCCCACCCTTTGGTGGCTCTTTAAGGATGGACTCCTACCAGAGGAGACCTACTTTGTTGGGTTTGCGCGTTCCCACCTGACCATGGATGACATCCGGGCTGCCTCTTTACCGTACATGAAGGTTAAAGATGTGGATAATGAGCGTCTCTCAGCATTTTTCCAAAGGAACTCTTACCTGGCCGGACACTATACAGAGGGAGAATCTTTCTCACAGCTGCAGTCCCACCTGAACTCTTTGTGCCATGGTACAGGTGCCAACTACATCTTCTACCTGGCATTGCCACCCACCGTCTACCACAACGTCACCTCCAACATTCGCCAGCACTGCATGAGCAACAAgGGTTGGAGCAGGGTGATTGTGGAGAAACCGTTTGGCCGGGATCTGCAGAGCTCAGAGGAACTGTCAGCACACCTCTCTTCCCTCTTCACTGAGGATCAGATCTACCGCATAGACCACTATCTGGGCAAGGAGATGGTGCAGAACCTCATGGTACTCAGgtttgGGAACAGAATTTTCGGCCCTATCTGGAATAGGGAAAGTGTTGCCAGCGTTGTTCTCACTTTTAAAGAACCCTTTGGAACTTATGGGAGAGGAGGATACTTCAATGACTTTGGTATTATCCGTGATGTCATGCAAAATCATCTTCTCCAGATGCTCACCCTGGTTGCCATGGAGAAGCCTGCTTCCACCAACTCGGATGATGTGAGAGATGAGAAGGTGAAGGTATTGAAGTGCATAGCACCAGTGGCTCTACATGATGTTGTGTTAGGGCAGTATGTGGGAAACCCTGAAGGGGAAGGGGAAGCTAAACTGGGTTACTTGGACGACCCCACCGTTCCCAAAGGCTCCCACACGGCCACTTTCGCTACTGCAGTGCTCTACGTCCATAACGAACGCTGGGAAGGGGTTCCCTTCATCCTGCGCTGTGGAAAGGCCTTGAACGAGCGCAAGGCTGAGGTGAGGCTGCAGTTCACTGATGTGCCAGGTGACATCTTTAATGCACAGTGCCAGAGGAATGAGCTGGTGGTGCGTGTGCAGCCTGATGAGGCTATTTATGCCAAAATGATGAGCAAAAAGCCTGGAGTGTACTTCAACCCCGAGGAGACAGAACTGGACCTGACCTACCGTAGCAGATACAAGGACGTGAAGCTTCCTGATGCCTACGAGCGTCTAATTCTGGATGTGTTCAGTGGAAGTCAGATGCACTTTGTGCGCAGtgatGAGCTCAGGGAAGCCTGGAGAATCTTCACTCCTCTCCTCCACCAGATGGAAGCAGAAAGGACACAACCAATCCCTTACACATATGGAAGCCGTGGACCTAAAGAGGCAGACGAGCTGATGAAGAGGGTGGGATTCCACTATGGAGGAACGTACAAGTACATGGCCTAGCCGGGGGGAGTGTTGTCACTCAGCTCGGAGGATAAATCAGTGGTGTGGTATAAACTGGAATGTGTTAAGTGGATAAACGCAGTGTTAACAACAAGCTGGAATGTGCTGCAGTCATCTACTTGTATGTTTTCCTATACTTCTGAGTTCagtcttaaattaaaaaaaaaaaaaaccatttcatacctaaaattttttt
>XM_034311925.1
TGCTCCGCGTGCGGCGTGAGCCTGAAAGCTATAGCGGCTCACGGATTATCTCCAACGGAGAAGCTGAAGCGTTTCTACCGGCCCGTTAGTGCAGCAAGGTGATCGCTTGTCCTGCTCGTTATTAGGAGTATGAGCTCGTTAGCTCGCTCTCGGTCCGAGGTGTTTGGAGAAATCCGGAAGGAGCTGTATGATGACCATGAATTTCGACAGGTTACTCATGTCTTTGTTATCATGGGCGCCTCGggGGATCTTGCCAAGAAGAAGATTTACCCCACCCTTTGGTGGCTCTTTAAGGATGGACTCCTACCAGAGGAGACCTACTTTGTTGGGTTTGCGCGTTCCCACCTGACCATGGATGACATCCGGGCTGCCTCTTTACCGTACATGAAGGTTAAAGATGTGGATAATGAGCGTCTCTCAGCATTTTTCCAAAGGAACTCTTACCTGGCCGGACACTATACAGAGGGAGAATCTTTCTCACAGCTGCAGTCCCACCTGAACTCTTTGTGCCATGGTACAGGTGCCAACTACATCTTCTACCTGGCATTGCCACCCACCGTCTACCACAACGTCACCTCCAACATTCGCCAGCACTGCATGAGCAACAAgGGTTGGAGCAGGGTGATTGTGGAGAAACCGTTTGGCCGGGATCTGCAGAGCTCAGAGGAACTGTCAGCACACCTCTCTTCCCTCTTCACTGAGGATCAGATCTACCGCATAGACCACTATCTGGGCAAGGAGATGGTGCAGAACCTCATGGTACTCAGgtttgGGAACAGAATTTTCGGCCCTATCTGGAATAGGGAAAGTGTTGCCAGCGTTGTTCTCACTTTTAAAGAACCCTTTGGAACTTATGGGAGAGGAGGATACTTCAATGACTTTGGTATTATCCGTGATGTCATGCAAAATCATCTTCTCCAGATGCTCACCCTGGTTGCCATGGAGAAGCCTGCTTCCACCAACTCGGATGATGTGAGAGATGAGAAGGTGAAGGTATTGAAGTGCATAGCACCAGTGGCTCTACATGATGTTGTGTTAGGGCAGTATGTGGGAAACCCTGAAGGGGAAGGGGAAGCTAAACTGGGTTACTTGGACGACCCCACCGTTCCCAAAGGCTCCCACACGGCCACTTTCGCTACTGCAGTGCTCTACGTCCATAACGAACGCTGGGAAGGGGTTCCCTTCATCCTGCGCTGTGGAAAGGCCTTGAACGAGCGCAAGGCTGAGGTGAGGCTGCAGTTCACTGATGTGCCAGGTGACATCTTTAATGCACAGTGCCAGAGGAATGAGCTGGTGGTGCGTGTGCAGCCTGATGAGGCTATTTATGCCAAAATGATGAGCAAAAAGCCTGGAGTGTACTTCAACCCCGAGGAGACAGAACTGGACCTGACCTACCGTAGCAGATACAAGGACGTGAAGCTTCCTGATGCCTACGAGCGTCTAATTCTGGATGTGTTCAGTGGAAGTCAGATGCACTTTGTGCGCAGtgatGAGCTCAGGGAAGCCTGGAGAATCTTCACTCCTCTCCTCCACCAGATGGAAGCAGAAAGGACACAACCAATCCCTTACACATATGGAAGCCGTGGACCTAAAGAGGCAGACGAGCTGATGAAGAGGGTGGGATTCCACTATGGAGGAACGTACAAGTGGGTCAACCCTCATCCCATGCAACactccaatcactgatcattgaTTAAGACTTAAATTGCCAAAGAGAATCAAGCCCAAATTCAGGAGATGAACCTGTTAATCAATGAAAGTGTTAACTCGCCATGTACACGAGATTTCTATTTTCTACAAATTAGCTTTTTCCCCTCTGTGAATGTTTTGTACAATTGGGAACGTGTTTacagctactttttttttcccaaatcaTGATTGATTATGCTCCATACCTCTTCATTTAGTGGTAATGCTTCTCTTGACTGTGTTGTTTGATTTGATTGTAATTTGCAAGCTCtcattttcatctctcttttcAATCTTTGACCAAATCAAGGCACAGTAAATTTTAGTTAAACTATTCCATGCAATGAGCTTCACCTTCCTTATTTTTCCTCATAGAGTGACGGGAACAGCAAAATGTAAGCACAATTCTAGAAATGGTGTTTGCTGTGGTGTGTAGCAGTGGTTTATGAGTTAAAAGCAAAAAGTTCACTATTTTATATAACTTTTGcagtattattataatagttTTGCTGCTGcatttgtacagtatatatgttaCAGTATTTTAGTGGACTAGCCCTTTTTGAGCCCTATGTGTATTATTGACGTGTTCAAATCAATACAGGGTTTTTCCCAAAAGCTAGGAAGGCTAGTTTAGTTTTCAGACGTGTATGCAtgggtgtgtgcatgggtgtgtggCTCAACAAACTGCCACACACGGTGAGTCAGCAAGGTATAACAGAGTGCAATATACTGATTGGatgccattctgtgtaaaattttCCAACCTGCTATAAATCACTTAATCTTCAAGCCAGGCCAGGTCCGGTCTGGACACATTGCAATCAGTGTTCACATCTTCAAACATTGAGTGTTTTGAGACGTGTCACGTCACTGACCCTTCTGGTTGTGACTCTTGCTCTCAGGTACATGGCCTAGCCGGGGGGAGTGTTGTCACTCAGCTCGGAGGATAAATCAGTGGTGTGGTATAAACTGGAATGTGTTAAGTGGATAAACGCAGTGTTAACAACAAGCTGGAATGTGCTGCAGTCATCTACTTGTATGTTTTCCTATACTTCTGAGTTCagtcttaaattaaaaaaaaaaaaaaccatttcatacctaaaattttttt

Function

symbol description
g6pd Enables UDP-glucose 6-dehydrogenase activity and glucose-6-phosphate dehydrogenase activity. Acts upstream of or within epiboly. Used to study hemolytic anemia. Human ortholog(s) of this gene implicated in several diseases, including anemia (multiple); cerebrovascular disease; favism; malaria (multiple); and neonatal jaundice. Orthologous to human G6PD (glucose-6-phosphate dehydrogenase).

GO:

id name namespace
GO:0006098 pentose-phosphate shunt biological_process
GO:0050661 NADP binding molecular_function
GO:0004345 glucose-6-phosphate dehydrogenase activity molecular_function

KEGG:

id description
K00036 G6PD, zwf; glucose-6-phosphate 1-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920801.2 True 2968 mRNA 0.45 13 19795054 19803144
XM_026920803.2 False 2020 mRNA 0.49 14 19795054 19803144
XM_034311925.1 False 2803 mRNA 0.46 14 19795054 19803145

Neighbor

gene id symbol gene type direction distance location
hspg2 hspg2 coding downstream 17120 19660633 ~ 19777934 (-)
tmem269 pss,LOC108275772,LOC101473555,LOC102292634 coding downstream 143464 19634054 ~ 19651590 (-)
LOC113530319 LOC108276210,LOC107564641,LOC107716162,LOC107570136,LOC107695834,LOC107668555 coding downstream 313458 19466628 ~ 19481596 (-)
LOC113530320 NA coding downstream 365077 19403660 ~ 19429977 (-)
LOC113530330 NA coding downstream 431487 19334125 ~ 19363567 (-)
galnt6 LOC108276041,LOC108441408,LOC107570209,LOC107695825,LOC107568460,LOC107668563 coding upstream 673 19803818 ~ 19819735 (-)
nol9 nol9 coding upstream 19122 19822267 ~ 19841123 (-)
klhl21 klhl21 coding upstream 46515 19849660 ~ 19863081 (-)
olfml3a LOC108276296,LOC108433368 coding upstream 165081 19968226 ~ 19977788 (-)
c1qtnf12 fam132a,LOC107687484,LOC107591142,LOC107716139,LOC107593919 coding upstream 205436 20008581 ~ 20033502 (-)
G257880 NA non-coding downstream 180375 19611920 ~ 19614679 (-)
G257870 NA non-coding downstream 203924 19586328 ~ 19591130 (-)
G257866 NA non-coding downstream 213372 19580212 ~ 19581682 (-)
G257838 NA non-coding downstream 315322 19479524 ~ 19479732 (-)
G257819 NA non-coding downstream 329718 19464054 ~ 19465336 (-)
LOC113530857 NA non-coding upstream 248276 20051421 ~ 20057906 (-)
G257980 NA non-coding upstream 325760 20128905 ~ 20129112 (-)
G258003 NA non-coding upstream 340880 20144025 ~ 20144249 (-)
LOC113530344 NA non-coding upstream 511217 20314362 ~ 20331611 (-)
LOC117599243 NA non-coding upstream 560910 20364055 ~ 20373180 (-)
magi3a magi3,LOC108275952 other downstream 173441 19483093 ~ 19621613 (-)
LOC117599227 LOC108275551 other downstream 357420 19431450 ~ 19437634 (-)
LOC113530570 NA other downstream 408013 19370687 ~ 19387041 (-)
lrp1ab lrp1,lrp1ab,LOC108425568,LOC107593902,LOC107673053 other downstream 730472 18936577 ~ 19064582 (-)
LOC113530839 LOC108275928,LOC108425553 other downstream 1263802 18509148 ~ 18531252 (-)
kansl2 kansl2,LOC107593923,LOC107716132,LOC107737532,LOC107591080,LOC107687436 other upstream 297854 20100999 ~ 20109212 (-)
LOC113530994 NA other upstream 300629 20103774 ~ 20103911 (-)
mlh3 mlh3 other upstream 306637 20109782 ~ 20119949 (-)
G258077 rarg other upstream 449025 20252170 ~ 20271907 (-)
nfe2 nfe2 other upstream 715280 20518425 ~ 20525464 (-)

Expression


Co-expression Network