haus8 (haus8)


Basic Information

Item Value
gene id haus8
gene name haus8
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 14055402 ~ 14060447 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921076.2
GTGGCAGTAATGCACTTTAACCTCAATtcgaagaagaagaaaaactaaACAGGAAACCGCGAAAAGCAAAGCAAATACGTTAATGGCAACTAAAAAGACTACAGCTGTCCGGAAAGTACTGAAAACTGCTTCACAAGACTCGTCTAAtttGGCATCTGGAAATGATGACAGCTGTGGAAACAACAGTGGAGCAAAAAGGAAAACCAAATcttcTGGGACAATTGTGAAGTCTCGTTATATGCAGACTGAAAAGAAGTCTGTTATAAagaaAAATGCACCAAATGAGTCTGTCCTTGTGCCACCCAGGCCTGCTTCACCTAAAGTTGGTAGTGGCCACAAACCCAGATTTGGCACACCTCCGAGACGGACATTACATGCTCAGTCTGATCCGAACTCCACGTCAGTTATACCCAGCCTTTTAGAGTCTTCAAGTCTCGGTGGAAATGTCTTGCAGTCAACAGTGCTGGATGGTCACTGCATGCGTCCAGACTTTGATGTCTCTGTCATTAAAGaaaatacagcaccatcATCACTACCAAGTGCAGTGGACCCGAATGCTAAAAAAAGGAACCTGGAGTTAGAAACATTCCTGCTGGCCTTCCTCACTGCTAAGATCGAAAACAGTACACAAAAACTTAAGGAAGAAGCAGAAAGAAATCTTATTACTCTGatggaagaagaggaaaagcTGCGATCAAAAATCATGAGCAAGAAACGACAGTGCCTTCATCTCgaaaagcagcagcagctcaatgATTTACTCGACCTGCAGATTGTCGCACTAAAACCTGTCGCTGCAACTGCAAAGCAATTCACAGAGGAGTACAAGACCTTCGCCTCAGCTATAGACACAACCCGGCACGAGCTACCTATTAAGAACTTACACATTGAAGAAGATAGAGGAGAGTTTCTTGATAAAGCAGTTGTCTGTCTGAATCAGAGTCAGTGTATCTTGGGGCAGTACATGAAGGATGTTTCCAAAGACAGTGAAAGCACTGCAGCATGCCTTAAAGAGATAAAAGGTGCAGCACATGAGATTGACCAGCATCTGCTCAGTACGTCTTCTGATCTGTTGGAACTGTCCTCACTGGTGAGTCAGGAGACGGTGCTGGTCCAGCAGTGTTTGGAGGAAGATAAAATTGGATTTAAGACAGTACAAAGTCTCTTTTCAGAttaaagtggattttttttttgtaaatgtgtagAGTAATTATTAAAGCATTGAAATCA
>XM_026921077.2
TGGCAGTAATGCACTTTAACCTCAATtcgaagaagaagaaaaactaaACAGGAAACCGCGAAAAGCAAAGCAAATACGTTAATGGCAACTAAAAAGACTACAGCTGTCCGGAAAGTACTGAAAACTGCTTCACAAGACTCGTCTAAtttGGCATCTGGAAATGATGACAGCTGTGGAAACAACAGTGGAGCAAAAAGGAAAACCAAATcttcTGGGACAATTGTGAAGTCTCGTTATATGCAGACTGAAAAGAAGTCTGTTATAAagaaAAATGCACCAAATGAGTCTGTCCTTGTGCCACCCAGGCCTGCTTCACCTAAAGTTGGTAGTGGCCACAAACCCAGATTTGGCACACCTCCGAGACGGACATTACATGCTCAGTCTGATCCGAACTCCACGTTTATACCCAGCCTTTTAGAGTCTTCAAGTCTCGGTGGAAATGTCTTGCAGTCAACAGTGCTGGATGGTCACTGCATGCGTCCAGACTTTGATGTCTCTGTCATTAAAGaaaatacagcaccatcATCACTACCAAGTGCAGTGGACCCGAATGCTAAAAAAAGGAACCTGGAGTTAGAAACATTCCTGCTGGCCTTCCTCACTGCTAAGATCGAAAACAGTACACAAAAACTTAAGGAAGAAGCAGAAAGAAATCTTATTACTCTGatggaagaagaggaaaagcTGCGATCAAAAATCATGAGCAAGAAACGACAGTGCCTTCATCTCgaaaagcagcagcagctcaatgATTTACTCGACCTGCAGATTGTCGCACTAAAACCTGTCGCTGCAACTGCAAAGCAATTCACAGAGGAGTACAAGACCTTCGCCTCAGCTATAGACACAACCCGGCACGAGCTACCTATTAAGAACTTACACATTGAAGAAGATAGAGGAGAGTTTCTTGATAAAGCAGTTGTCTGTCTGAATCAGAGTCAGTGTATCTTGGGGCAGTACATGAAGGATGTTTCCAAAGACAGTGAAAGCACTGCAGCATGCCTTAAAGAGATAAAAGGTGCAGCACATGAGATTGACCAGCATCTGCTCAGTACGTCTTCTGATCTGTTGGAACTGTCCTCACTGGTGAGTCAGGAGACGGTGCTGGTCCAGCAGTGTTTGGAGGAAGATAAAATTGGATTTAAGACAGTACAAAGTCTCTTTTCAGAttaaagtggattttttttttgtaaatgtgtagAGTAATTATTAAAGCATTGAAATCA

Function

symbol description
haus8 Predicted to enable microtubule binding activity. Predicted to be involved in centrosome cycle and spindle assembly. Predicted to be active in centrosome; cytoplasm; and nuclear microtubule. Orthologous to human HAUS8 (HAUS augmin like complex subunit 8).

NR:

description
HAUS augmin-like complex subunit 8 isoform X5

GO: NA

KEGG:

id description
K16591 HAUS8; HAUS augmin-like complex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921076.2 True 1230 mRNA 0.43 10 14055402 14060447
XM_026921077.2 False 1226 mRNA 0.43 10 14055402 14060446

Neighbor

gene id symbol gene type direction distance location
sac3d1 sac3d1 coding downstream 1230 14050444 ~ 14054172 (-)
mrgbp mrgbp coding downstream 7173 14042572 ~ 14048229 (-)
eef1a2 eef1a2,LOC108276238,LOC107724190,LOC107705720,LOC108429306,LOC107696983,LOC107551525,LOC107693560 coding downstream 12935 14035800 ~ 14042467 (-)
sulf2b sulf2,sulf2b,LOC108429304,LOC107724188,LOC107705722,LOC107693554,LOC107551524 coding downstream 107833 13814838 ~ 13947569 (-)
si:ch211-218g4.2 LOC108275877,LOC108429303,LOC107724193,LOC107696985 coding downstream 242047 13733088 ~ 13813355 (-)
pigt pigt coding upstream 11712 14072159 ~ 14086054 (-)
ppp1r3da LOC108275498,LOC108438215 coding upstream 90980 14151427 ~ 14153632 (-)
ttll9 ttll9 coding upstream 102079 14162526 ~ 14172104 (-)
edn3b NA coding upstream 116779 14177226 ~ 14197008 (-)
chl1a LOC108276120 coding upstream 217647 14278094 ~ 14322302 (-)
G254567 NA non-coding downstream 354997 13700009 ~ 13700405 (-)
G254600 NA non-coding downstream 358782 13692797 ~ 13696620 (-)
G254599 NA non-coding downstream 389929 13664893 ~ 13665473 (-)
G254587 NA non-coding downstream 440739 13614428 ~ 13614663 (-)
G254568 cables2 non-coding downstream 464432 13590500 ~ 13590970 (-)
G255020 NA non-coding upstream 470378 14530825 ~ 14532588 (-)
G255306 NA non-coding upstream 815197 14875644 ~ 14878506 (-)
G255403 NA non-coding upstream 1119939 15180386 ~ 15180640 (-)
G255385 NA non-coding upstream 1121710 15182157 ~ 15227960 (-)
G255435 NA non-coding upstream 1271679 15332126 ~ 15332451 (-)
oprl1 oprl1,LOC107681404,LOC107727003,LOC107666560 other downstream 771517 13251140 ~ 13283885 (-)
plagl2 plagl2,LOC107690855,LOC107681868,LOC107559482,LOC107747490,LOC107558237,LOC107707758 other downstream 1121094 12897474 ~ 12934308 (-)
ptk6b LOC108276246 other downstream 1887607 12155728 ~ 12167795 (-)
LOC113530816 LOC108276066,LOC108276064,LOC108276065,LOC108275619 other downstream 2196056 11838796 ~ 11859346 (-)
avpr2ab avpr2,avpr2ab,LOC108275514,LOC106567019,LOC106572707,LOC108436342,LOC107672000 other downstream 2486799 11549394 ~ 11568603 (-)
LOC113530423 LOC108276099 other upstream 68516 14128963 ~ 14150581 (-)
G255071 krt8,LOC108411779,LOC100304655,LOC107551542,LOC107681390,LOC107705700,LOC107666368,LOC102212080,LOC102292851,LOC102776167,LOC101486263,LOC103367855,LOC107391340 other upstream 638825 14699272 ~ 14704270 (-)
LOC113530775 NA other upstream 1198038 15258485 ~ 15317365 (-)
znf512b znf512b,si:dkey-256k13.2 other upstream 1597889 15658336 ~ 15820241 (-)
fam50a fam50a,LOC107671832,LOC107715033,LOC107594034,LOC107707036 other upstream 2587376 16647823 ~ 16695031 (-)

Expression


Co-expression Network