G261355


Basic Information

Item Value
gene id G261355
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 657927 ~ 875777 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU309687
CCTACAACACTATCTACAACACAATCTACAACACAACCTCCAACACTATCTACAACACAATCTACAACACAATCTACAACACAACCTCCAACACTATCTACAACACAATCTACAACACAACCTACAACACTATCTACAACACAACCTCCAACACAACCTCCAACACTATCTACAACACAACCTACTACATTATCTACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309687 True 200 lncRNA 0.39 3 657927 875777

Neighbor

gene id symbol gene type direction distance location
LOC113524176 dnajc30 coding downstream 42575 613221 ~ 615352 (-)
LOC113524150 myl10,LOC108276823,LOC108413922,LOC103022780,LOC107734439,LOC107577538,LOC107728843,LOC107588876 coding downstream 85631 569645 ~ 572296 (-)
LOC117599315 NA coding downstream 137832 518930 ~ 520095 (-)
LOC117599314 myl10,LOC108276823,LOC108413922,LOC107734439,LOC107577538,LOC107728843,LOC107588876 coding downstream 139230 517680 ~ 518697 (-)
LOC113523729 tex14 coding downstream 197692 436309 ~ 460235 (-)
wnt11 wnt11,wnt11r,LOC107686210,LOC107589704,LOC107751408,LOC107747044 coding upstream 64726 940503 ~ 960814 (-)
si:dkey-250d21.1 LOC108276748,LOC108442106 coding upstream 111313 987090 ~ 996795 (-)
LOC113524167 thap12 coding upstream 123464 999241 ~ 1006203 (-)
foxo1b LOC108277356 coding upstream 177174 1052951 ~ 1081289 (-)
ap4m1 ap4m1,LOC107702797,LOC107720677,LOC107554303,LOC107742404 coding upstream 206092 1081869 ~ 1090531 (-)
G261341 NA non-coding downstream 27537 629837 ~ 630390 (-)
G261339 NA non-coding downstream 31038 626308 ~ 626889 (-)
G261266 NA non-coding downstream 88696 515862 ~ 569231 (-)
G261283 NA non-coding downstream 165201 432117 ~ 492726 (-)
G261676 NA non-coding upstream 94136 969913 ~ 1054023 (-)
G261686 NA non-coding upstream 121864 997641 ~ 998301 (-)
LOC113524153 NA non-coding upstream 356586 1232363 ~ 1235521 (-)
G261748 NA non-coding upstream 447403 1323180 ~ 1323407 (-)
G261753 NA non-coding upstream 452794 1328571 ~ 1328776 (-)
fhl1b fhl1b,LOC108444522,LOC107718794,LOC107701105,LOC107693928,LOC107548848 other downstream 341602 301010 ~ 316325 (-)
LOC117599327 NA other upstream 105629 981406 ~ 1032535 (-)
si:ch211-266i6.3 LOC108276750 other upstream 131137 1006914 ~ 1014289 (-)
lhfpl6 lhfp,LOC103046216,LOC107686123,LOC107691645,LOC107577306,LOC107751385,LOC107746987,LOC107589696,LOC108442104 other upstream 140030 1015807 ~ 1112393 (-)
nlgn2b nlgn2,LOC108277041,LOC108443341,LOC107678031,LOC107720555,LOC107554306 other upstream 389675 1265452 ~ 1410939 (-)
G261868 LOC108276666,LOC108277182,LOC108277183,LOC108276665,LOC108277185 other upstream 899784 1775561 ~ 1780407 (-)

Expression


Co-expression Network