triap1 (triap1,LOC106568193)


Basic Information

Item Value
gene id triap1
gene name triap1,LOC106568193
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 5077853 ~ 5080643 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU312620
ACGAAGACGCAAAGTCAAGAGAAAGGGGTTGGAGATCGGCTCGGGGTTATGACACATAAATAAATGCGCAATTTATCTGGTTTCGACTACACTGTAGGAAACTTATCTTCTCTGCCATTTTTGGTTTCTTTGGCTGAGAATGAACAGCGTGGGTGAAGGCTGCACTGAGCTGAAGCGCGAATATGACCAGTGTTTTAACCGCTGGTTCGCCGAGAAGTTCCTGAAAGGAGACCGGGGTGATGATCCATGCACCGAACTGTTCAAGAAATATCAGTCCTGTGTTCAGAAAGCTATCAAAGAAAAGGACATCCCTATTGATGGTGTCGAGTTCATGGGTCCAAACAAAGAGAaaccaggcagttgatgtgacTTTGAACCATCATTCTTCAGAATTACTTGAGGAAACTCAATCTAGATTGCACTGACGATGTCCGCATCATACGTGATGACAAAGATACAAAGACTTACGCTTGAGAACTTTTTTGGGTGCAGAACAAAGCTGTTTAACACTTAGTCAACTGGAATGCTACAAAGGACACGGCAGATcgatttttgtttttgcttgtaGGCAGGGAATCCATACATGGTAGATGTAATGAAGCCAGTTAAAATGCTGGATGAGTGGAATACTAAGAAGCTGCTGTTAACATGCCTCTGAAATATGA
>XM_026943913.2
ATCCTGCGCCGTTTGTTGATCACGTGGTACGAAGACGCAAAGTCAAGAGAAAGGGGTTGGAGATCGGCTCGGGGTTATGACACATAAATAAATGCGCAATTTATCTGGTTTCGACTACACTGTAGGAAACTTATCTTCTCTGCCATTTTTGGTTTCTTTGGCTGAGAATGAACAGCGTGGGTGAAGGCTGCACTGAGCTGAAGCGCGAATATGACCAGTGTTTTAACCGCTGGTTCGCCGAGAAGTTCCTGAAAGGAGACCGGGGTGATGATCCATGCACCGAACTGTTCAAGAAATATCAGTCCTGTGTTCAGAAAGCTATCAAAGAAAAGGACATCCCTATTGATGGTGTCGAGTTCATGGGTCCAAACAAAGAGAaaccaggcagttgatgtgacTTTGAACCATCATTCTTCAGAATTACTTGAGGAAACTCAATCTAGATTGCACTGACGATGTCCGCATCATACGTGATGACAAAGATACAAAGACTTACGCTTGAGAACTTTTTTGGGTGCAGAACAAAGCTGTTTAACACTTAGTCAACTGGAATGCTACAAAGGACACGGCAGATcgatttttgtttttgcttgtaGGCAGGGAATCCATACATGGTAGATGTAATGAAGCCAGTTAAAATGCTGGATGAGTGGAATACTAAGAAGCTGCTGTTAACATGCCTCTGAAATATGAGTAATacatttgaaattgaaatttca

Function

symbol description
triap1 Is expressed in adaxial cell; myotome; optic vesicle; and retina. Orthologous to human TRIAP1 (TP53 regulated inhibitor of apoptosis 1).

NR:

description
PREDICTED: TP53-regulated inhibitor of apoptosis 1-like

GO: NA

KEGG:

id description
K17968 TRIAP1, MDM35; TRIAP1/MDM35 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU312620 False 665 TUCP 0.43 2 5077881 5080617
XM_026943913.2 True 719 mRNA 0.43 2 5077853 5080643

Neighbor

gene id symbol gene type direction distance location
sgsm1b sgsm1b,LOC108276524,LOC108435151 coding upstream 3072 5058675 ~ 5074781 (+)
LOC113544783 LOC108277320 coding upstream 61407 4994706 ~ 5016446 (+)
rfx3 rfx3,LOC107710408 coding upstream 194580 4865568 ~ 4883273 (+)
glis3 LOC108277006 coding upstream 213716 4842081 ~ 4864137 (+)
bmpr1bb bmpr1b,LOC108435137 coding upstream 509490 4496472 ~ 4568363 (+)
gal3st1b LOC108277024 coding downstream 9033 5089676 ~ 5101509 (+)
apc apc,LOC107727753,LOC107568587,LOC107692017,LOC107549007,LOC107653779 coding downstream 90708 5171351 ~ 5204423 (+)
LOC113544876 LOC108277390 coding downstream 125274 5205917 ~ 5208655 (+)
cntnap3 LOC108276565,LOC108410547 coding downstream 310041 5390684 ~ 5517746 (+)
zmp:0000001301 LOC108277205,LOC108441065 coding downstream 529539 5610182 ~ 5626256 (+)
G263801 NA non-coding upstream 52345 5023275 ~ 5025508 (+)
G263716 NA non-coding upstream 191052 4885346 ~ 4886801 (+)
G263715 NA non-coding upstream 193126 4883327 ~ 4884727 (+)
G263724 NA non-coding upstream 201348 4876245 ~ 4876505 (+)
G263634 NA non-coding upstream 302144 4721546 ~ 4775709 (+)
G263953 NA non-coding downstream 124352 5204995 ~ 5205419 (+)
G263993 NA non-coding downstream 492321 5572964 ~ 5573280 (+)
G264009 LOC108277354 non-coding downstream 586939 5667582 ~ 5726945 (+)
G264002 NA non-coding downstream 622200 5702843 ~ 5704831 (+)
G264056 NA non-coding downstream 841667 5922310 ~ 5926306 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 1501716 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 1936100 3116169 ~ 3141753 (+)
pcp4a NA other upstream 2260590 2795491 ~ 2817263 (+)
rps25 rps25,LOC107583381,LOC107565279,LOC108433270,LOC107758587,LOC107679519 other upstream 2330536 2744396 ~ 2747317 (+)
ponzr2 LOC108277330 other upstream 3658364 1411986 ~ 1419489 (+)
G264336 NA other downstream 928157 6008800 ~ 6011902 (+)
LOC113544903 mphosph9 other downstream 1089250 6169893 ~ 6194681 (+)
G264948 NA other downstream 1986228 7066871 ~ 7082441 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 2035408 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 3094871 8175514 ~ 8187611 (+)

Expression


Co-expression Network