G264336


Basic Information

Item Value
gene id G264336
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 6008800 ~ 6011902 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU313203
AGCTGCAGAAGAATCTGAACCGGCTGCCGGTGCAGGTGCAGATGCTGCAGACGCAGATGCTGCAGATGCTGCAGATGTTGCAGACGCAGGCGCTGCTGTTGGTTGTTCACTCTCTGCAGGCTGCACTTCGGCTTCATTTCCATCTGCAGACGCTGCACTTGCAGGTACTTGCTCTGTGGACGAAGCTTCAGTGGATATCGATTCCTGTGCGGGTTCTGCAGGTCCTGCAATTTCTGGCTGCGATTGAACTTCGATTTCCTCCACTACAGGGGGAACATCTCGGGCTTCTTCGACCAGCTTCATcgccctctctctgtcctgcacTGCCAGCTTCTCGAACAACTTAAAGGTGGCAGTAATGAGCTAACTCATTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU313203 True 378 TUCP 0.54 2 6008800 6011902

Neighbor

gene id symbol gene type direction distance location
pargl NA coding upstream 97771 5903105 ~ 5911029 (+)
LOC113544817 LOC108276712 coding upstream 166250 5836657 ~ 5842550 (+)
ccar2 LOC108276708 coding upstream 173275 5828124 ~ 5835525 (+)
ykt6 ykt6,LOC108441080,LOC107704135,LOC107665783,LOC107733284,LOC107751647,LOC107602234 coding upstream 202303 5797141 ~ 5806497 (+)
aebp1 aebp1,LOC108441076,LOC107751625,LOC107665781,LOC107704136 coding upstream 212312 5783968 ~ 5796488 (+)
mrps24 mrps24 coding downstream 89 6011991 ~ 6015837 (+)
polm polm coding downstream 19078 6030980 ~ 6038104 (+)
ved LOC108276657 coding downstream 33338 6045240 ~ 6047205 (+)
LOC113544829 LOC108276728,LOC108410544 coding downstream 47932 6059834 ~ 6080426 (+)
ccdc62 ccdc62 coding downstream 78870 6090772 ~ 6098940 (+)
G264056 NA non-coding upstream 82494 5922310 ~ 5926306 (+)
G264009 LOC108277354 non-coding upstream 281855 5667582 ~ 5726945 (+)
G264002 NA non-coding upstream 303969 5702843 ~ 5704831 (+)
G263993 NA non-coding upstream 435520 5572964 ~ 5573280 (+)
G263953 NA non-coding upstream 803381 5204995 ~ 5205419 (+)
G264424 NA non-coding downstream 162412 6174314 ~ 6174692 (+)
G264426 NA non-coding downstream 183026 6194928 ~ 6195142 (+)
G264427 NA non-coding downstream 196088 6207990 ~ 6209011 (+)
G264428 NA non-coding downstream 206607 6218509 ~ 6283930 (+)
G264475 NA non-coding downstream 369764 6381666 ~ 6452851 (+)
triap1 triap1,LOC106568193 other upstream 928157 5077853 ~ 5080643 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 2432663 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 2867047 3116169 ~ 3141753 (+)
pcp4a NA other upstream 3191537 2795491 ~ 2817263 (+)
rps25 rps25,LOC107583381,LOC107565279,LOC108433270,LOC107758587,LOC107679519 other upstream 3261483 2744396 ~ 2747317 (+)
LOC113544903 mphosph9 other downstream 157991 6169893 ~ 6194681 (+)
G264948 NA other downstream 1054969 7066871 ~ 7082441 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 1104149 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 2163612 8175514 ~ 8187611 (+)
LOC113544929 NA other downstream 2317803 8329705 ~ 8353841 (+)

Expression


Co-expression Network