G264948


Basic Information

Item Value
gene id G264948
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 7066871 ~ 7082441 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU313925
GTTTGGTCAAAGAGACTTGAATTAGAGGTGTGCACAGCCCGGGACTGTTCATTTCATCCCACTCCTATCTTCTCCTGAAGAATTCTGGCCAATCCAGCCCattcctgaaggaattctgaccaatcccgtcCACTCCCACAGAAAGTTTTAGCAATCTCtgctgaaggtgaatgaatgaccGGAGTGAGCACCATATACATTctcatgttaatgaacgtggCCTTTCTGTGGTTGTCCCAGCACCAGTGCACACCTAATTTGAACACTCTAATCTACAGTCTACTGGTCGCTAGTACAAGGAAGGAGCTGAAAAATGGTGTCAGACTGTACTCAGTAGCAGATCTCACCCAATCCGCTCCTGCTCCATGGCCTCAATTAGCTCGGCCCGGGCCAGCACACTGTTGATGATTTCCTTCTCCTCATCCGTCAGCTCCTCAGCTCCAGTGAATTCCATCTGGCCAGTGTATAGCTGTCAGCCTGTCCTACAGCTTACGACTGATGATCTGTGCTGCGTTCCGAcgcaggagaggagaggaaaggagaggagaggagcgGGATCACTCTGCCTGTTTCAGCAGGAGCTAAACGCCTATCTGTGTCTCCTGCACACACTGTCTCCTCAATGTACTGCTGctcacagagaaagagagagagagagagagagagagagagagagagagagagaacctcCACCCCCTCCTCAGCCGCCTGCATTAAATCACAGAGTTGCTGAGCACAAAAGCTCCTACCTACCGCGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU313925 True 761 TUCP 0.51 2 7066871 7082441

Neighbor

gene id symbol gene type direction distance location
plk2a LOC108277216,LOC108425197,LOC107653495,LOC107602251,LOC107709193,LOC107588929,LOC107706772 coding upstream 365050 6697674 ~ 6701821 (+)
LOC113544738 LOC108277217,LOC108425195 coding upstream 371202 6687467 ~ 6695669 (+)
LOC113544721 pde4d,LOC108276982,LOC108425192,LOC107704165,LOC107709115,LOC107653658,LOC108443004,LOC102789696 coding upstream 415019 6469950 ~ 6651852 (+)
depdc1b depdc1b,LOC107654254,LOC107704111,LOC107709206,LOC107602227 coding upstream 607909 6447459 ~ 6458962 (+)
elovl7b LOC108277391,LOC108425137,LOC107588931,LOC107706775,LOC107704168,LOC106571348 coding upstream 619681 6444254 ~ 6447190 (+)
tmed2 tmed2,LOC108425203 coding downstream 26066 7108507 ~ 7113994 (+)
naa25 naa25 coding downstream 45310 7127751 ~ 7152305 (+)
tor4aa tor4a coding downstream 86807 7169248 ~ 7174553 (+)
slc25a1b slc25a1,slc25a1b,LOC108425209,LOC107704153,LOC107706761 coding downstream 100507 7182948 ~ 7197818 (+)
pi4kaa pi4ka,pi4kaa,LOC108425210,LOC107751806,LOC107704152 coding downstream 116607 7199048 ~ 7243280 (+)
G264938 NA non-coding upstream 11212 7055347 ~ 7055659 (+)
G264936 NA non-coding upstream 12789 7053868 ~ 7054082 (+)
G264934 NA non-coding upstream 14931 7051504 ~ 7051940 (+)
G264933 NA non-coding upstream 15509 7051057 ~ 7051362 (+)
G264894 NA non-coding upstream 103953 6962585 ~ 6962918 (+)
G264944 NA non-coding downstream 7226 7089667 ~ 7090962 (+)
G264972 NA non-coding downstream 70358 7152799 ~ 7153864 (+)
G264970 brap,LOC107602221,LOC107712082 non-coding downstream 71833 7154274 ~ 7157567 (+)
G264976 NA non-coding downstream 82687 7165128 ~ 7166073 (+)
G264986 NA non-coding downstream 165744 7248185 ~ 7249078 (+)
LOC113544903 mphosph9 other upstream 872190 6169893 ~ 6194681 (+)
G264336 NA other upstream 1054969 6008800 ~ 6011902 (+)
triap1 triap1,LOC106568193 other upstream 1986228 5077853 ~ 5080643 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 3490734 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 3925118 3116169 ~ 3141753 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 33610 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 1093073 8175514 ~ 8187611 (+)
LOC113544929 NA other downstream 1247264 8329705 ~ 8353841 (+)
G265696 NA other downstream 1551194 8633635 ~ 8639728 (+)
G265807 LOC107756568 other downstream 1586373 8668814 ~ 8669797 (+)

Expression


Co-expression Network