Gene
RNA
| Item | Value |
|---|---|
| gene id | G265294 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 7585611 ~ 7585902 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU314344 | True | 292 | lncRNA | 0.32 | 1 | 7585611 | 7585902 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117599324 | il1b | coding | upstream | 150685 | 7432541 ~ 7434926 (+) |
| oclna | LOC108276968 | coding | upstream | 192131 | 7384282 ~ 7393480 (+) |
| marveld2a | LOC108276966 | coding | upstream | 203623 | 7371065 ~ 7381988 (+) |
| trnam-cau_33 | NA | coding | upstream | 215272 | 7370268 ~ 7370339 (+) |
| trnam-cau_32 | NA | coding | upstream | 215733 | 7369807 ~ 7369878 (+) |
| cryba4 | cryba4,LOC103045114 | coding | downstream | 32397 | 7618299 ~ 7620573 (+) |
| grk3 | grk3,LOC108276813 | coding | downstream | 42179 | 7628081 ~ 7717349 (+) |
| LOC113544796 | myo18b,LOC108276812 | coding | downstream | 132153 | 7718055 ~ 7770444 (+) |
| LOC113544706 | sez6l,LOC108276519,LOC107741658,LOC107758626 | coding | downstream | 199776 | 7785678 ~ 7855941 (+) |
| tpst2 | tpst2,ubc | coding | downstream | 269425 | 7855327 ~ 7858825 (+) |
| LOC113544905 | NA | non-coding | upstream | 31032 | 7549590 ~ 7554579 (+) |
| G265270 | NA | non-coding | upstream | 46289 | 7536855 ~ 7539322 (+) |
| G265019 | LOC108277003 | non-coding | upstream | 86309 | 7495504 ~ 7499302 (+) |
| LOC117599325 | NA | non-coding | upstream | 153268 | 7431362 ~ 7432343 (+) |
| G265053 | NA | non-coding | upstream | 162600 | 7422770 ~ 7423011 (+) |
| G265325 | NA | non-coding | downstream | 50984 | 7636886 ~ 7638066 (+) |
| G265326 | NA | non-coding | downstream | 53076 | 7638978 ~ 7640736 (+) |
| G265328 | NA | non-coding | downstream | 73625 | 7659527 ~ 7661080 (+) |
| G265331 | NA | non-coding | downstream | 121498 | 7707400 ~ 7709793 (+) |
| G265417 | NA | non-coding | downstream | 257887 | 7843789 ~ 7844656 (+) |
| ddx55 | ddx55,LOC107704124,LOC107665764 | other | upstream | 459365 | 7116051 ~ 7126246 (+) |
| G264948 | NA | other | upstream | 503170 | 7066871 ~ 7082441 (+) |
| LOC113544903 | mphosph9 | other | upstream | 1390930 | 6169893 ~ 6194681 (+) |
| G264336 | NA | other | upstream | 1573709 | 6008800 ~ 6011902 (+) |
| triap1 | triap1,LOC106568193 | other | upstream | 2504968 | 5077853 ~ 5080643 (+) |
| tmem167a | tmem167a,LOC107658615,LOC107588977 | other | downstream | 589612 | 8175514 ~ 8187611 (+) |
| LOC113544929 | NA | other | downstream | 743803 | 8329705 ~ 8353841 (+) |
| G265696 | NA | other | downstream | 1047733 | 8633635 ~ 8639728 (+) |
| G265807 | LOC107756568 | other | downstream | 1082912 | 8668814 ~ 8669797 (+) |
| LOC113534874 | LOC108276751 | other | downstream | 1671041 | 9256943 ~ 9264111 (+) |
