Gene
RNA
| Item | Value |
|---|---|
| gene id | G267257 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 11432659 ~ 11432862 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU316726 | True | 204 | lncRNA | 0.36 | 1 | 11432659 | 11432862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psmg1 | psmg1 | coding | upstream | 2821 | 11424549 ~ 11429838 (+) |
| klhl35 | klhl35 | coding | upstream | 32559 | 11392935 ~ 11400100 (+) |
| emsy | emsy,LOC107671635,LOC107690840 | coding | upstream | 66308 | 11347581 ~ 11366351 (+) |
| LOC113543443 | nhlrc3,LOC108276604,LOC107671632 | coding | upstream | 87079 | 11337851 ~ 11345580 (+) |
| ilk | ilk,LOC107718724,LOC107720653 | coding | upstream | 94980 | 11320077 ~ 11337679 (+) |
| erg | erg | coding | downstream | 34268 | 11467130 ~ 11513468 (+) |
| kcnj6 | kcnj6 | coding | downstream | 120386 | 11553248 ~ 11617321 (+) |
| vps26c | dscr3 | coding | downstream | 208161 | 11641023 ~ 11649190 (+) |
| pigp | pigp | coding | downstream | 253453 | 11686315 ~ 11691822 (+) |
| hlcs | hlcs | coding | downstream | 264118 | 11696980 ~ 11723734 (+) |
| G267103 | NA | non-coding | upstream | 321062 | 11111386 ~ 11111597 (+) |
| G267090 | NA | non-coding | upstream | 344796 | 11086248 ~ 11087863 (+) |
| G267070 | NA | non-coding | upstream | 375638 | 11056612 ~ 11057021 (+) |
| G267062 | NA | non-coding | upstream | 390269 | 11042217 ~ 11042390 (+) |
| G267051 | NA | non-coding | upstream | 396429 | 11035998 ~ 11036230 (+) |
| G267314 | dyrk1a | non-coding | downstream | 191512 | 11624374 ~ 11627972 (+) |
| G267317 | NA | non-coding | downstream | 217567 | 11650429 ~ 11652188 (+) |
| G267362 | NA | non-coding | downstream | 395707 | 11828569 ~ 11828818 (+) |
| G267381 | NA | non-coding | downstream | 431025 | 11863887 ~ 11868663 (+) |
| G267429 | NA | non-coding | downstream | 548319 | 11981181 ~ 12011289 (+) |
| scaf4a | scaf4,LOC107555128 | other | upstream | 550394 | 10865612 ~ 10882265 (+) |
| G266868 | LOC108276566 | other | upstream | 861954 | 10569028 ~ 10570705 (+) |
| dclk1a | dclk1,LOC107728871,LOC107577778 | other | upstream | 1669962 | 9704360 ~ 9762697 (+) |
| LOC113543674 | NA | other | upstream | 2007804 | 9419665 ~ 9424855 (+) |
| G266161 | NA | other | upstream | 2096369 | 9335801 ~ 9336290 (+) |
| vps36 | vps36,LOC107701118 | other | downstream | 3329451 | 14762313 ~ 14771073 (+) |
| trnar-ccu_11 | NA | other | downstream | 5654806 | 17087668 ~ 17087740 (+) |
| trnam-cau_40 | NA | other | downstream | 5654886 | 17087748 ~ 17087819 (+) |
| trnar-ccu_12 | NA | other | downstream | 5655587 | 17088449 ~ 17088521 (+) |
| trnam-cau_41 | NA | other | downstream | 5655667 | 17088529 ~ 17088600 (+) |
