G267362


Basic Information

Item Value
gene id G267362
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 11828569 ~ 11828818 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU316842
agtgtgaaaagatggatctcaaaatcatacagtcattgttggaaagggttcaaatacacaaaaatgctggaaaaccaaagaatttgtgggacctgaaggatttttctgaagaacagcaggcagtttaactgttcaggacaaacaagggactcatgaacaactatcactaaacaaaaaaacacagctgtggatcattcaggtaacaacacagtattaagaatcaaggggatgtaaacttttgaacagggtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU316842 True 250 lncRNA 0.38 1 11828569 11828818

Neighbor

gene id symbol gene type direction distance location
LOC113543498 crybg3 coding upstream 31499 11759353 ~ 11797070 (+)
hlcs hlcs coding upstream 104835 11696980 ~ 11723734 (+)
pigp pigp coding upstream 136747 11686315 ~ 11691822 (+)
vps26c dscr3 coding upstream 179379 11641023 ~ 11649190 (+)
kcnj6 kcnj6 coding upstream 211248 11553248 ~ 11617321 (+)
cblb cblb,LOC102193754,LOC102306619 coding downstream 119968 11948786 ~ 12031535 (+)
picalma picalm,picalma,LOC107744613,LOC107699270 coding downstream 478515 12307333 ~ 12348359 (+)
vps26bl v26bl,LOC108423787,LOC107588734,LOC107751386,LOC107691644,LOC105024202 coding downstream 536233 12365051 ~ 12374005 (+)
fez1 fez1,LOC107691643,LOC107751387 coding downstream 550873 12379691 ~ 12392657 (+)
robo3 robo3 coding downstream 649805 12478623 ~ 12630735 (+)
G267317 NA non-coding upstream 176381 11650429 ~ 11652188 (+)
G267314 dyrk1a non-coding upstream 200597 11624374 ~ 11627972 (+)
G267257 NA non-coding upstream 395707 11432659 ~ 11432862 (+)
G267103 NA non-coding upstream 716972 11111386 ~ 11111597 (+)
G267090 NA non-coding upstream 740706 11086248 ~ 11087863 (+)
G267381 NA non-coding downstream 35069 11863887 ~ 11868663 (+)
G267429 NA non-coding downstream 152363 11981181 ~ 12011289 (+)
G267499 NA non-coding downstream 602266 12431084 ~ 12431810 (+)
G267801 LOC107739129 non-coding downstream 693368 12522186 ~ 12522521 (+)
G268027 NA non-coding downstream 937335 12766153 ~ 12766367 (+)
scaf4a scaf4,LOC107555128 other upstream 946304 10865612 ~ 10882265 (+)
G266868 LOC108276566 other upstream 1257864 10569028 ~ 10570705 (+)
dclk1a dclk1,LOC107728871,LOC107577778 other upstream 2065872 9704360 ~ 9762697 (+)
LOC113543674 NA other upstream 2403714 9419665 ~ 9424855 (+)
G266161 NA other upstream 2492279 9335801 ~ 9336290 (+)
vps36 vps36,LOC107701118 other downstream 2933495 14762313 ~ 14771073 (+)
trnar-ccu_11 NA other downstream 5258850 17087668 ~ 17087740 (+)
trnam-cau_40 NA other downstream 5258930 17087748 ~ 17087819 (+)
trnar-ccu_12 NA other downstream 5259631 17088449 ~ 17088521 (+)
trnam-cau_41 NA other downstream 5259711 17088529 ~ 17088600 (+)

Expression


Co-expression Network