rc3h2 (rc3h2,LOC108276736,LOC107595546,LOC106561687)



Basic Information


Item Value
gene id rc3h2
gene name rc3h2,LOC108276736,LOC107595546,LOC106561687
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 23244560 ~ 23274653 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU324492
GCAACTCGCTCCCTCTGGAGGTGCTGCACTCGTCCATCTATCATCCCCCTCTCCGGGAGCGCTTCAACTCGCTCGACAGCGCCTACTGCAGCGCCTCCAGCAGGAGAGCCGCGCTGCACCGGgaggcGTATGGCCGAGCCGCTCTGGGCTCTGAGGATTTCTACTCTCTCCGTCAGGAACAGTGGTCGCATCAGCACCACGGCTCGGGCCGAGCGGTGCAGCATTCCCCCGTCTTCACTGTGGATCTCTgccctgagtgtgtggagagcggtgtgtgtgtgagctgtaaaTGTGGAGGTGGAGATACTCCTCTCGGTCGTTACTCGCCGTGGTCGTGTGGCGCCGTCGGCCCGTTCGACTCGGAGCCTCTTTACTCTCACACCTGTTCCCAACACACGGACGGTGAGTGTACGGCTAAACACTGGCTGCACGTTTCTGAGCCGTACAGACGTGTGAAGGAAGAGGACCCCATCATCCCGTTCGGCGAGGGTCCCATCATCTCAAAGTGGGGCGCCATTTCACGCTCGTCTCGCACAGACCACCACACCACCGAACCCGTTCAGGCCACGGCGACGCACAGCCGCACAACCACCACCACGCTCATCAACttcaaagattacAGCTCTCAGGTCGGACAGGGCGAGTGCCGGTGGAGTCCGTGTGTGTTCGAGCCGACTCGCTCCGGGTTCCTAGagagtgagcagaaaCGCAGCTCCTTCAGCACCGCCGGGAAACGTGCAGCCGAGTTCCTGGCTCGCGACGGAGCAGAGAGCGGACCGGACCGGGACATCGAGCTGGAGCTGTGCGCTCTGCACATGGAGGACTCGGAACCACCGGGGATCCAGTCTGAGGCGTCTTTGGGGCCCCGGTGTGAAAATCACCTCTCCAGTGTGTTCAGTGACGGAGCAGGGAGCTCGCGGACGGCGCAGTCGTTATCTGAGCACATGGACGCTCATTTACTGAAGAAGATGGCATTTCGGAAGTCTCTCTCCCCCGGGGGCCTGAACGCTGGAGGTCTCACTGTGGGCGGTCTGGTGATGAAGACGGGTTCACTAAGACCTCCAGGAGACGCAGCCGGACCGAGCCCGGGACCTGAAATGATTCTGAACgggagctaaaaaaaaaaaaatttcagtgatTTAGAGTCTGAATGTTGGGTCAAAGCTCACGGCACTGATCCATGAGACCTTAGAGTctcgtttattattttcttaaagcACTTGCTTCCCCAAATTAATTCCAAACATCTTTCCAGTAATCAGATGTTTATGGAACATAAcc
>XM_034312932.1
TAGTCACCGAGTCTCGCGCTGTGCGACAgaacttttttccctctctcggTGTACCGGAGAGAGGAGCATGCACGCGCTCAGCGCCGGTGCCGTGAAGTCTGAAGAGAGCTgcaggaggatgaggatgaggaggaagaggctCGAGCGGTTCATGCGCGAGCTCGTCTTGCAGAAAGAAATGCCGgtgtgtgtgagcagtcGAACCCGGGCGTCATGTGATCTCTGTAAGCCCGTGAACGCCCCCCGGAGGTGCCAGGATGCCCGTGCAGGCGGCGCAGTGGACGGAGTTCCTGTCCTGCCCCATCTGCCTGAACGAGTTCAACGCCGGCGGACACAAACCCATCAGCCTGGGCTGCTCACACACCGTGTGTAAGACGTGTCTCCACAAACTGCACCGTAAAGCCTGTCCCTTCGACCAGACCGCCATCAGCATCGACATCGAGCTCCTGCCCGTCAACCGCgccctgctgctgctggtggggGCGCAGgttccTGAAAGCCAGAGTGTGTGTCTGGGCAGCACTGAAGACACGCAGCATTATGACGTGTGCAGGACATGTGTGGAGGAGTTGGCGCTGTACCTCAAACCCATCACTGGGGGGAAAGGCGTGGTGTCTCCGAGTGCGAGCGCGCTCAGTCGGCCCATGCAGAGGAAGCTGGTGACTCTGGTGAACTGCCagctggtggaggaggagggCCGCGTGAGGGCACTACGAGCGGCTCGCTCTCTAGGAGAACGCACCATCACCGAGCTCATCCTGCAGCACCAGAACCCACAGCAGCTCTCCGCCAACCTGTGGGCCGCCGTCAGGGCGCGGGGGTGTCAGTTCCTCGGACCTgcgatgCAGGAGGACGCACTGAAGCTCGTACTGCTGGCTCTCGAGGACGGCTCGGCTCTCTCTCGCAAGGTTCTGGTGCTCTTCGTGGTCCAGAAGCTGGAAGCTCGGTTTCCTCAGGCCTCCAAGACGAGCATCGGACACGTGGTGCAGCTTCTGTACCGAGCTTCCTGCTTTAAGGTGACGAAGCGTGATGAAGACTCCTCGCTGATGCAGCTGAAGGAGGAGTTTCGTACGTACGAGGCTTTGAGGCGCGAACACGACGCACAGATCGTCCACATCGCCATGGAGGCGGGGCTCCGCATTTCTCCTGAGCAGTGGTCCTCTCTGCTGTACGGCGACCTCGTCCACAAATCACACATGCAGTCCATCATAGACAAGCTTCAGTCCCCAGAATCCTTTGCGAAGAGCGTGCAGGAGCTGACGATCGTCCTGCAGAGAACCGGAGACCCGGCCAACCTCAACATCCTCCGAGCTCCGCTAGAGCTCCTGGCTGGCATTGACCAGAACCtggatgcaGCCGTGCCCTCGTGGGAGGAGCTTGAGTCTGTGATGTTGGCGGTGAAGGTCGTGGTCCACGGGCTCGTCGAGTTCATCCAGAATTTCAGCAAAAAGAGTCACGAGACGTTTCAGtctcAGCCCAACAGTAAATACAAGACTAGCATGTGCCGAGACCTGCGGCAGCAAGGAACCTGCCCACGGGGTGTCAACTGCACCTTCGCCCACACCCAGGACGAGCTGGAAAaGTACCGAATGAGGAATAAGAAGGTCGGTTCAGGAACCAGACCGTCCCTTCTGTCCAAAACGGGTGCCGTTAAATCCTCAGCTGTAGACGCGTGTCCCGGCGAGCAGGAGGGCGGGGCCTCGGAGAGCTCCTCCCCCACTCGCCTCGTGCCCAGAGGAggagagcaggagcaggaggagctgaTGAAGGAGCTAGCTGACGGATTCCCGGCTACCAGCCAAGACCTGAAAACGGGTTCTCCTCCGAAGAGCCCAGCGTCAGGACCTCCTGCAGACGCCTCGCTGCTCCTCAAACCCGCTTCCGTACCGCAGAGAGGTCACCACGAGGTCACGTACTTTCCTGAACAGAGATCTGCGTACGATCTGCCGTCCTGCCCGTCTGGTAATTTTTTCCCTGCTCCTCTGTCGAACCCTCACAAACCCTACCTGCCTCGCTTCCCTCGCTCCAGCCCCGCCTCTGACTCCTCAGCCCCGCCTCCTCTGGCTCCTCCCTACCCTGACTCGCCCCTCCCGTCCCGTTTAGGCATGTCTCCGTATCCCCCCTCCCCCTCTTACCCACCCCTTCCTCACTCTCACCCCCACGGTCACGGCGTTTACGCTCCCGTCTACGACAGTCGGCGTCTCTGGAGGCCTCAGCTGTACCACAGACAGGACGGCCGGAGCAACTCGCTCCCTCTGGAGGTGCTGCACTCGTCCATCTATCATCCCCCTCTCCGGGAGCGCTTCAACTCGCTCGACAGCGCCTACTGCAGCGCCTCCAGCAGGAGAGCCGCGCTGCACCGGgaggcGTATGGCCGAGCCGCTCTGGGCTCTGAGGATTTCTACTCTCTCCGTCAGGAACAGTGGTCGCATCAGCACCACGGCTCGGGCCGAGCGGTGCAGCATTCCCCCGTCTTCACTGTGGATCTCTgccctgagtgtgtggagagcggtgtgtgtgtgagctgtaaaTGTGGAGGTGGAGATACTCCTCTCGGTCGTTACTCGCCGTGGTCGTGTGGCGCCGTCGGCCCGTTCGACTCGGAGCCTCTTTACTCTCACACCTGTTCCCAACACACGGACGGTGAGTGTACGGCTAAACACTGGCTGCACGTTTCTGAGCCGTACAGACGTGTGAAGGAAGAGGACCCCATCATCCCGTTCGGCGAGGGTCCCATCATCTCAAAGTGGGGCGCCATTTCACGCTCGTCTCGCACAGACCACCACACCACCGAACCCGTTCAGGCCACGGCGACGCACAGCCGCACAACCACCACCACGCTCATCAACttcaaagattacAGCTCTCAGGTCGGACAGGGCGAGTGCCGGTGGAGTCCGTGTGTGTTCGAGCCGACTCGCTCCGGGTTCCTAGagagtgagcagaaaCGCAGCTCCTTCAGCACCGCCGGGAAACGTGCAGCCGAGTTCCTGGCTCGCGACGGAGCAGAGAGCGGACCGGACCGGGACATCGAGCTGGAGCTGTGCGCTCTGCACATGGAGGACTCGGAACCACCGGGGATCCAGTCTGAGGCGTCTTTGGGGCCCCGGTGTGAAAATCACCTCTCCAGTGTGTTCAGTGACGGAGCAGGGAGCTCGCGGACGGCGCAGTCGTTATCTGAGCACATGGACGCTCATTTACTGAAGAAGATGGCATTTCGGAAGTCTCTCTCCCCCGGGGGCCTGAACGCTGGAGGTCTCACTGTGGGCGGTCTGGTGATGAAGACGGGTTCACTAAGACCTCCAGGAGACGCAGCCGGACCGAGCCCGGGACCTGAAATGATTCTGAACgggagctaaaaaaaaaaaaatttcagtgatTTAGAGTCTGAATGTTGGGTCAAAGCTCACGGCACTGATCCATGAGACCTTAGAGTctcgtttattattttcttaaagcACTTGCTTCCCCAAATTAATTCCAAACATCTTTCCAGTAATCAGATGTTTATGGAACATAAcccagttttttgttttgttttgttttttaaagaaaacctaTTGAAAAagattatgcatttttttttcaagcttcactcctttaattttttctttctctctatttttttttctgctttttaaaattttgcagCTTATGCAAATGTGTTTGTTCACAACCCCCATCTCAGGTCACCTAGCTGCCAATCAGAATCCACTTCTTAGCCAATCAGAGGCCTCCGATTACTCTTCCATCGGAaataacagtagtagtaataataataataataatgatgatgataatctGCATTTGTGATGAGCTTAATCTATTGCAGTTCCTGCCTGTAGGTTTCTATATTTCTACTaaatgtttacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagaggggaaaaagccTGGTGCTCCGTAAATACTGTACATTGCATATGTCATGGTGCAGTACTAATGACTCAGTTGACATGCATGAAACGCGagtgtttt
>XM_034312933.1
CAGCATCGAGATGTCATAACTACAGCTCGTCTTTTGCTTTAAGTTGGAGGCGTGTCAGCATCAGAAAGTCACTGTGGCCACCAGCATGAATGTGATGTCTGCAGCAGACGgtgtgtgtgagcagtcGAACCCGGGCGTCATGTGATCTCTGTAAGCCCGTGAACGCCCCCCGGAGGTGCCAGGATGCCCGTGCAGGCGGCGCAGTGGACGGAGTTCCTGTCCTGCCCCATCTGCCTGAACGAGTTCAACGCCGGCGGACACAAACCCATCAGCCTGGGCTGCTCACACACCGTGTGTAAGACGTGTCTCCACAAACTGCACCGTAAAGCCTGTCCCTTCGACCAGACCGCCATCAGCATCGACATCGAGCTCCTGCCCGTCAACCGCgccctgctgctgctggtggggGCGCAGgttccTGAAAGCCAGAGTGTGTGTCTGGGCAGCACTGAAGACACGCAGCATTATGACGTGTGCAGGACATGTGTGGAGGAGTTGGCGCTGTACCTCAAACCCATCACTGGGGGGAAAGGCGTGGTGTCTCCGAGTGCGAGCGCGCTCAGTCGGCCCATGCAGAGGAAGCTGGTGACTCTGGTGAACTGCCagctggtggaggaggagggCCGCGTGAGGGCACTACGAGCGGCTCGCTCTCTAGGAGAACGCACCATCACCGAGCTCATCCTGCAGCACCAGAACCCACAGCAGCTCTCCGCCAACCTGTGGGCCGCCGTCAGGGCGCGGGGGTGTCAGTTCCTCGGACCTgcgatgCAGGAGGACGCACTGAAGCTCGTACTGCTGGCTCTCGAGGACGGCTCGGCTCTCTCTCGCAAGGTTCTGGTGCTCTTCGTGGTCCAGAAGCTGGAAGCTCGGTTTCCTCAGGCCTCCAAGACGAGCATCGGACACGTGGTGCAGCTTCTGTACCGAGCTTCCTGCTTTAAGGTGACGAAGCGTGATGAAGACTCCTCGCTGATGCAGCTGAAGGAGGAGTTTCGTACGTACGAGGCTTTGAGGCGCGAACACGACGCACAGATCGTCCACATCGCCATGGAGGCGGGGCTCCGCATTTCTCCTGAGCAGTGGTCCTCTCTGCTGTACGGCGACCTCGTCCACAAATCACACATGCAGTCCATCATAGACAAGCTTCAGTCCCCAGAATCCTTTGCGAAGAGCGTGCAGGAGCTGACGATCGTCCTGCAGAGAACCGGAGACCCGGCCAACCTCAACATCCTCCGAGCTCCGCTAGAGCTCCTGGCTGGCATTGACCAGAACCtggatgcaGCCGTGCCCTCGTGGGAGGAGCTTGAGTCTGTGATGTTGGCGGTGAAGGTCGTGGTCCACGGGCTCGTCGAGTTCATCCAGAATTTCAGCAAAAAGAGTCACGAGACGTTTCAGtctcAGCCCAACAGTAAATACAAGACTAGCATGTGCCGAGACCTGCGGCAGCAAGGAACCTGCCCACGGGGTGTCAACTGCACCTTCGCCCACACCCAGGACGAGCTGGAAAaGTACCGAATGAGGAATAAGAAGGTCGGTTCAGGAACCAGACCGTCCCTTCTGTCCAAAACGGGTGCCGTTAAATCCTCAGCTGTAGACGCGTGTCCCGGCGAGCAGGAGGGCGGGGCCTCGGAGAGCTCCTCCCCCACTCGCCTCGTGCCCAGAGGAggagagcaggagcaggaggagctgaTGAAGGAGCTAGCTGACGGATTCCCGGCTACCAGCCAAGACCTGAAAACGGGTTCTCCTCCGAAGAGCCCAGCGTCAGGACCTCCTGCAGACGCCTCGCTGCTCCTCAAACCCGCTTCCGTACCGCAGAGAGGTCACCACGAGGTCACGTACTTTCCTGAACAGAGATCTGCGTACGATCTGCCGTCCTGCCCGTCTGGTAATTTTTTCCCTGCTCCTCTGTCGAACCCTCACAAACCCTACCTGCCTCGCTTCCCTCGCTCCAGCCCCGCCTCTGACTCCTCAGCCCCGCCTCCTCTGGCTCCTCCCTACCCTGACTCGCCCCTCCCGTCCCGTTTAGGCATGTCTCCGTATCCCCCCTCCCCCTCTTACCCACCCCTTCCTCACTCTCACCCCCACGGTCACGGCGTTTACGCTCCCGTCTACGACAGTCGGCGTCTCTGGAGGCCTCAGCTGTACCACAGACAGGACGGCCGGAGCAACTCGCTCCCTCTGGAGGTGCTGCACTCGTCCATCTATCATCCCCCTCTCCGGGAGCGCTTCAACTCGCTCGACAGCGCCTACTGCAGCGCCTCCAGCAGGAGAGCCGCGCTGCACCGGgaggcGTATGGCCGAGCCGCTCTGGGCTCTGAGGATTTCTACTCTCTCCGTCAGGAACAGTGGTCGCATCAGCACCACGGCTCGGGCCGAGCGGTGCAGCATTCCCCCGTCTTCACTGTGGATCTCTgccctgagtgtgtggagagcggtgtgtgtgtgagctgtaaaTGTGGAGGTGGAGATACTCCTCTCGGTCGTTACTCGCCGTGGTCGTGTGGCGCCGTCGGCCCGTTCGACTCGGAGCCTCTTTACTCTCACACCTGTTCCCAACACACGGACGGTGAGTGTACGGCTAAACACTGGCTGCACGTTTCTGAGCCGTACAGACGTGTGAAGGAAGAGGACCCCATCATCCCGTTCGGCGAGGGTCCCATCATCTCAAAGTGGGGCGCCATTTCACGCTCGTCTCGCACAGACCACCACACCACCGAACCCGTTCAGGCCACGGCGACGCACAGCCGCACAACCACCACCACGCTCATCAACttcaaagattacAGCTCTCAGGTCGGACAGGGCGAGTGCCGGTGGAGTCCGTGTGTGTTCGAGCCGACTCGCTCCGGGTTCCTAGagagtgagcagaaaCGCAGCTCCTTCAGCACCGCCGGGAAACGTGCAGCCGAGTTCCTGGCTCGCGACGGAGCAGAGAGCGGACCGGACCGGGACATCGAGCTGGAGCTGTGCGCTCTGCACATGGAGGACTCGGAACCACCGGGGATCCAGTCTGAGGCGTCTTTGGGGCCCCGGTGTGAAAATCACCTCTCCAGTGTGTTCAGTGACGGAGCAGGGAGCTCGCGGACGGCGCAGTCGTTATCTGAGCACATGGACGCTCATTTACTGAAGAAGATGGCATTTCGGAAGTCTCTCTCCCCCGGGGGCCTGAACGCTGGAGGTCTCACTGTGGGCGGTCTGGTGATGAAGACGGGTTCACTAAGACCTCCAGGAGACGCAGCCGGACCGAGCCCGGGACCTGAAATGATTCTGAACgggagctaaaaaaaaaaaaatttcagtgatTTAGAGTCTGAATGTTGGGTCAAAGCTCACGGCACTGATCCATGAGACCTTAGAGTctcgtttattattttcttaaagcACTTGCTTCCCCAAATTAATTCCAAACATCTTTCCAGTAATCAGATGTTTATGGAACATAAcccagttttttgttttgttttgttttttaaagaaaacctaTTGAAAAagattatgcatttttttttcaagcttcactcctttaattttttctttctctctatttttttttctgctttttaaaattttgcagCTTATGCAAATGTGTTTGTTCACAACCCCCATCTCAGGTCACCTAGCTGCCAATCAGAATCCACTTCTTAGCCAATCAGAGGCCTCCGATTACTCTTCCATCGGAaataacagtagtagtaataataataataataatgatgatgataatctGCATTTGTGATGAGCTTAATCTATTGCAGTTCCTGCCTGTAGGTTTCTATATTTCTACTaaatgtttacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagaggggaaaaagccTGGTGCTCCGTAAATACTGTACATTGCATATGTCATGGTGCAGTACTAATGACTCAGTTGACATGCATGAAACGCGagtgtttt
>XM_034312934.1
TTCAGGGCACGCGCATTTCAGCTGGTTAGAGATGACAAGTGTGGATTAATATGATGTCCTGGACAAGACGCAGACTTTTACCCGTGCAAGAAAGTGCCTTCCTGTTCGTTCTGAGGGTTTGAGCTTCAATTACAGAATTATTGCCTTGACGTGGGAAgaaaagtggattatttataAGATGATTTGTCACTGTGCTTTAAGgtgtgtgtgagcagtcGAACCCGGGCGTCATGTGATCTCTGTAAGCCCGTGAACGCCCCCCGGAGGTGCCAGGATGCCCGTGCAGGCGGCGCAGTGGACGGAGTTCCTGTCCTGCCCCATCTGCCTGAACGAGTTCAACGCCGGCGGACACAAACCCATCAGCCTGGGCTGCTCACACACCGTGTGTAAGACGTGTCTCCACAAACTGCACCGTAAAGCCTGTCCCTTCGACCAGACCGCCATCAGCATCGACATCGAGCTCCTGCCCGTCAACCGCgccctgctgctgctggtggggGCGCAGgttccTGAAAGCCAGAGTGTGTGTCTGGGCAGCACTGAAGACACGCAGCATTATGACGTGTGCAGGACATGTGTGGAGGAGTTGGCGCTGTACCTCAAACCCATCACTGGGGGGAAAGGCGTGGTGTCTCCGAGTGCGAGCGCGCTCAGTCGGCCCATGCAGAGGAAGCTGGTGACTCTGGTGAACTGCCagctggtggaggaggagggCCGCGTGAGGGCACTACGAGCGGCTCGCTCTCTAGGAGAACGCACCATCACCGAGCTCATCCTGCAGCACCAGAACCCACAGCAGCTCTCCGCCAACCTGTGGGCCGCCGTCAGGGCGCGGGGGTGTCAGTTCCTCGGACCTGcgatgCAGGAGGACGCACTGAAGCTCGTACTGCTGGCTCTCGAGGACGGCTCGGCTCTCTCTCGCAAGGTTCTGGTGCTCTTCGTGGTCCAGAAGCTGGAAGCTCGGTTTCCTCAGGCCTCCAAGACGAGCATCGGACACGTGGTGCAGCTTCTGTACCGAGCTTCCTGCTTTAAGGTGACGAAGCGTGATGAAGACTCCTCGCTGATGCAGCTGAAGGAGGAGTTTCGTACGTACGAGGCTTTGAGGCGCGAACACGACGCACAGATCGTCCACATCGCCATGGAGGCGGGGCTCCGCATTTCTCCTGAGCAGTGGTCCTCTCTGCTGTACGGCGACCTCGTCCACAAATCACACATGCAGTCCATCATAGACAAGCTTCAGTCCCCAGAATCCTTTGCGAAGAGCGTGCAGGAGCTGACGATCGTCCTGCAGAGAACCGGAGACCCGGCCAACCTCAACATCCTCCGAGCTCCGCTAGAGCTCCTGGCTGGCATTGACCAGAACCtggatgcaGCCGTGCCCTCGTGGGAGGAGCTTGAGTCTGTGATGTTGGCGGTGAAGGTCGTGGTCCACGGGCTCGTCGAGTTCATCCAGAATTTCAGCAAAAAGAGTCACGAGACGTTTCAGtctcAGCCCAACAGTAAATACAAGACTAGCATGTGCCGAGACCTGCGGCAGCAAGGAACCTGCCCACGGGGTGTCAACTGCACCTTCGCCCACACCCAGGACGAGCTGGAAAaGTACCGAATGAGGAATAAGAAGGTCGGTTCAGGAACCAGACCGTCCCTTCTGTCCAAAACGGGTGCCGTTAAATCCTCAGCTGTAGACGCGTGTCCCGGCGAGCAGGAGGGCGGGGCCTCGGAGAGCTCCTCCCCCACTCGCCTCGTGCCCAGAGGAggagagcaggagcaggaggagctgaTGAAGGAGCTAGCTGACGGATTCCCGGCTACCAGCCAAGACCTGAAAACGGGTTCTCCTCCGAAGAGCCCAGCGTCAGGACCTCCTGCAGACGCCTCGCTGCTCCTCAAACCCGCTTCCGTACCGCAGAGAGGTCACCACGAGGTCACGTACTTTCCTGAACAGAGATCTGCGTACGATCTGCCGTCCTGCCCGTCTGGTAATTTTTTCCCTGCTCCTCTGTCGAACCCTCACAAACCCTACCTGCCTCGCTTCCCTCGCTCCAGCCCCGCCTCTGACTCCTCAGCCCCGCCTCCTCTGGCTCCTCCCTACCCTGACTCGCCCCTCCCGTCCCGTTTAGGCATGTCTCCGTATCCCCCCTCCCCCTCTTACCCACCCCTTCCTCACTCTCACCCCCACGGTCACGGCGTTTACGCTCCCGTCTACGACAGTCGGCGTCTCTGGAGGCCTCAGCTGTACCACAGACAGGACGGCCGGAGCAACTCGCTCCCTCTGGAGGTGCTGCACTCGTCCATCTATCATCCCCCTCTCCGGGAGCGCTTCAACTCGCTCGACAGCGCCTACTGCAGCGCCTCCAGCAGGAGAGCCGCGCTGCACCGGgaggcGTATGGCCGAGCCGCTCTGGGCTCTGAGGATTTCTACTCTCTCCGTCAGGAACAGTGGTCGCATCAGCACCACGGCTCGGGCCGAGCGGTGCAGCATTCCCCCGTCTTCACTGTGGATCTCTgccctgagtgtgtggagagcggtgtgtgtgtgagctgtaaaTGTGGAGGTGGAGATACTCCTCTCGGTCGTTACTCGCCGTGGTCGTGTGGCGCCGTCGGCCCGTTCGACTCGGAGCCTCTTTACTCTCACACCTGTTCCCAACACACGGACGGTGAGTGTACGGCTAAACACTGGCTGCACGTTTCTGAGCCGTACAGACGTGTGAAGGAAGAGGACCCCATCATCCCGTTCGGCGAGGGTCCCATCATCTCAAAGTGGGGCGCCATTTCACGCTCGTCTCGCACAGACCACCACACCACCGAACCCGTTCAGGCCACGGCGACGCACAGCCGCACAACCACCACCACGCTCATCAACttcaaagattacAGCTCTCAGGTCGGACAGGGCGAGTGCCGGTGGAGTCCGTGTGTGTTCGAGCCGACTCGCTCCGGGTTCCTAGagagtgagcagaaaCGCAGCTCCTTCAGCACCGCCGGGAAACGTGCAGCCGAGTTCCTGGCTCGCGACGGAGCAGAGAGCGGACCGGACCGGGACATCGAGCTGGAGCTGTGCGCTCTGCACATGGAGGACTCGGAACCACCGGGGATCCAGTCTGAGGCGTCTTTGGGGCCCCGGTGTGAAAATCACCTCTCCAGTGTGTTCAGTGACGGAGCAGGGAGCTCGCGGACGGCGCAGTCGTTATCTGAGCACATGGACGCTCATTTACTGAAGAAGATGGCATTTCGGAAGTCTCTCTCCCCCGGGGGCCTGAACGCTGGAGGTCTCACTGTGGGCGGTCTGGTGATGAAGACGGGTTCACTAAGACCTCCAGGAGACGCAGCCGGACCGAGCCCGGGACCTGAAATGATTCTGAACgggagctaaaaaaaaaaaaatttcagtgatTTAGAGTCTGAATGTTGGGTCAAAGCTCACGGCACTGATCCATGAGACCTTAGAGTctcgtttattattttcttaaagcACTTGCTTCCCCAAATTAATTCCAAACATCTTTCCAGTAATCAGATGTTTATGGAACATAAcccagttttttgttttgttttgttttttaaagaaaacctaTTGAAAAagattatgcatttttttttcaagcttcactcctttaattttttctttctctctatttttttttctgctttttaaaattttgcagCTTATGCAAATGTGTTTGTTCACAACCCCCATCTCAGGTCACCTAGCTGCCAATCAGAATCCACTTCTTAGCCAATCAGAGGCCTCCGATTACTCTTCCATCGGAaataacagtagtagtaataataataataataatgatgatgataatctGCATTTGTGATGAGCTTAATCTATTGCAGTTCCTGCCTGTAGGTTTCTATATTTCTACTaaatgtttacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagaggggaaaaagccTGGTGCTCCGTAAATACTGTACATTGCATATGTCATGGTGCAGTACTAATGACTCAGTTGACATGCATGAAACGCGagtgtttt

Function


symbol description
rc3h2 Predicted to enable RNA binding activity and ubiquitin protein ligase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; protein polyubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within posttranscriptional regulation of gene expression and protein ubiquitination. Predicted to be active in cytoplasmic stress granule. Orthologous to human RC3H2 (ring finger and CCCH-type domains 2).

NR:

description
roquin-2-like

GO: NA

KEGG:

id description
K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein

RNA


RNA id representative length rna type GC content exon number start site end site
TU324492 False 1281 TUCP 0.58 8 23265453 23274170
XM_034312932.1 False 4005 mRNA 0.57 19 23250984 23274653
XM_034312933.1 False 3931 mRNA 0.57 19 23247556 23274653
XM_034312934.1 True 4022 mRNA 0.56 19 23244560 23274653

Neighbor


gene id symbol gene type direction distance location
si:ch211-243g18.2 LOC108277365,LOC108433518,LOC107744167,LOC107685187,LOC107686498,LOC107713290 coding upstream 12525 23220145 ~ 23232035 (+)
ndufa8 ndufa8,LOC107686420 coding upstream 75043 23163709 ~ 23169517 (+)
rbm18 rbm18,LOC107686423 coding upstream 122853 23104677 ~ 23121707 (+)
paqr3b paqr3b,LOC108276876,LOC108433513,LOC107713330,LOC107597624,LOC107744080 coding upstream 199482 23040466 ~ 23045078 (+)
antxr2b LOC108276875,LOC108433535,LOC107685134,LOC107597625,LOC107744079,LOC107686426 coding upstream 205011 23019928 ~ 23039549 (+)
LOC113543956 gpr21,LOC108433543,LOC107686419,LOC101884949,LOC107744074,LOC107597614,LOC107595548 coding downstream 68143 23342796 ~ 23345808 (+)
sh2d3ca sh2d3ca,LOC108277244,LOC108433546,LOC107713320,LOC107597612,LOC107744235 coding downstream 292061 23566714 ~ 23618521 (+)
urm1 urm1 coding downstream 349484 23624137 ~ 23640347 (+)
cercam cercam,LOC107744239,LOC107597609,LOC107685123 coding downstream 387966 23662619 ~ 23676630 (+)
sardh sardh coding downstream 408897 23683550 ~ 23721518 (+)
G273719 NA non-coding upstream 108728 23135579 ~ 23135832 (+)
LOC117599346 NA non-coding upstream 170622 23068937 ~ 23073938 (+)
G273644 NA non-coding upstream 182215 23047921 ~ 23062345 (+)
G273683 NA non-coding upstream 205944 23037409 ~ 23038616 (+)
LOC117599377 NA non-coding upstream 249763 22992542 ~ 22994797 (+)
G273880 NA non-coding downstream 11347 23286000 ~ 23333549 (+)
G273900 NA non-coding downstream 122155 23396808 ~ 23398531 (+)
G274161 NA non-coding downstream 400990 23675643 ~ 23677227 (+)
G274186 NA non-coding downstream 577344 23851997 ~ 23852218 (+)
G274192 NA non-coding downstream 585171 23859824 ~ 23860703 (+)
lhx6 lhx6,LOC107597616,LOC107685129 other upstream 98993 23049812 ~ 23145567 (+)
lrrtm4l1 lrrtm4l1,LOC108276585,LOC108433509,LOC107730422,LOC107553720 other upstream 578990 22622428 ~ 22665570 (+)
tmem230a tmem230,tmem230a,LOC103035677,LOC105888828,LOC106565272 other upstream 869685 22369256 ~ 22374875 (+)
LOC113544129 LOC108276555,LOC108427250,LOC107687808,LOC107720650,LOC107744134,LOC107678044,LOC563710,LOC107560524 other upstream 1210563 21922551 ~ 22033997 (+)
LOC113543995 NA other upstream 1765680 21476087 ~ 21478880 (+)
LOC113543986 rabgap1,LOC107686418,LOC107744072 other downstream 6908 23281561 ~ 23386107 (+)
cdc37l1 LOC108276758,LOC108433523 other downstream 663325 23937978 ~ 23940132 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other downstream 828420 24103073 ~ 24112853 (+)
LOC117599389 NA other downstream 951501 24226154 ~ 24232819 (+)
trappc13 trappc13,LOC107667267,LOC107726564 other downstream 1205946 24480599 ~ 24498642 (+)

Expression



Co-expression Network