Gene
RNA
| Item | Value |
|---|---|
| gene id | G274380 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23943412 ~ 24020906 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU325072 | True | 375 | lncRNA | 0.29 | 2 | 23943412 | 24020906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| exd3 | exd3 | coding | downstream | 8042 | 23873693 ~ 23935370 (-) |
| dbh | dbh | coding | downstream | 197879 | 23723727 ~ 23745533 (-) |
| strbp | strbp,LOC107744073,LOC107686417 | coding | downstream | 435910 | 23394533 ~ 23507502 (-) |
| morn5 | morn5 | coding | downstream | 779946 | 23150003 ~ 23163466 (-) |
| mrrf | mrrf | coding | downstream | 838754 | 23085312 ~ 23104658 (-) |
| ptbp3 | ptbp3,LOC107658670,LOC107744247 | coding | upstream | 20125 | 24041031 ~ 24095321 (-) |
| LOC113543977 | NA | coding | upstream | 97117 | 24118023 ~ 24193873 (-) |
| LOC117599328 | LOC107690397,LOC107716059,LOC107572820 | coding | upstream | 144471 | 24165377 ~ 24171214 (-) |
| lin54 | lin54,LOC107744261 | coding | upstream | 238802 | 24259708 ~ 24274253 (-) |
| srek1ip1 | NA | coding | upstream | 285546 | 24306452 ~ 24309825 (-) |
| G274383 | NA | non-coding | downstream | 1194 | 23939196 ~ 23942218 (-) |
| G274370 | NA | non-coding | downstream | 74955 | 23868242 ~ 23868457 (-) |
| G274361 | NA | non-coding | downstream | 94848 | 23848360 ~ 23848564 (-) |
| G274318 | ambp | non-coding | downstream | 97936 | 23835055 ~ 23845476 (-) |
| G274321 | NA | non-coding | downstream | 102954 | 23839988 ~ 23840458 (-) |
| LOC113544148 | NA | non-coding | upstream | 881 | 24021787 ~ 24030494 (-) |
| G274379 | NA | non-coding | upstream | 13403 | 24034309 ~ 24038497 (-) |
| G274421 | NA | non-coding | upstream | 82105 | 24103011 ~ 24104102 (-) |
| G274425 | NA | non-coding | upstream | 87564 | 24108470 ~ 24109448 (-) |
| LOC117599329 | NA | non-coding | upstream | 104252 | 24125158 ~ 24126207 (-) |
| nrarpa | nrarp,nrarpa | other | downstream | 80144 | 23859305 ~ 23863268 (-) |
| G274342 | slc27a4 | other | downstream | 141128 | 23798359 ~ 23802284 (-) |
| LOC113544130 | rusc2 | other | downstream | 2736242 | 21189969 ~ 21207170 (-) |
| drg1 | drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524 | other | downstream | 3162338 | 20772560 ~ 20781074 (-) |
| pmaip1 | NA | other | downstream | 3828953 | 20111448 ~ 20114459 (-) |
| inip | inip,LOC107571239,LOC107658659,LOC107558675 | other | upstream | 230642 | 24251548 ~ 24253312 (-) |
| LOC113544170 | plac8 | other | upstream | 276570 | 24297476 ~ 24301032 (-) |
