G274624


Basic Information

Item Value
gene id G274624
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24491415 ~ 24491856 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325373
tttaaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactcacctttaaacactctcctttaacacaaacactctcctttaaacacaaacactctcctttaaacactcaactttaaacacaaacactcacctttaaacacaaacactctcctttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325373 True 213 lncRNA 0.34 2 24491415 24491856

Neighbor

gene id symbol gene type direction distance location
ppwd1 ppwd1 coding upstream 26315 24457036 ~ 24465100 (+)
cwc27 cwc27,LOC107744252,LOC107713303 coding upstream 132292 24310031 ~ 24359123 (+)
cops4 cops4,csn4,LOC107685106,LOC107558694 coding upstream 194690 24276082 ~ 24296725 (+)
LOC113544070 kiaa1958,LOC107683261,LOC106568575 coding upstream 239347 24233760 ~ 24252068 (+)
ugcg ugcg,LOC107571241,LOC107558686,LOC107713309,LOC107658668 coding upstream 480365 23971438 ~ 24011050 (+)
nln nln,LOC107743138 coding downstream 12007 24503863 ~ 24525223 (+)
apba1b LOC108276879 coding downstream 226873 24718729 ~ 24733547 (+)
G274583 NA non-coding upstream 214 24403023 ~ 24491201 (+)
G274457 lin54 non-coding upstream 229839 24257907 ~ 24261576 (+)
G274431 NA non-coding upstream 366202 24124736 ~ 24125213 (+)
G274289 NA non-coding upstream 380677 24107648 ~ 24110738 (+)
G274239 NA non-coding upstream 544908 23945616 ~ 23946507 (+)
G274639 NA non-coding downstream 45274 24537130 ~ 24537736 (+)
G274646 NA non-coding downstream 91125 24582981 ~ 24583278 (+)
G274653 NA non-coding downstream 159894 24651750 ~ 24652197 (+)
G274662 NA non-coding downstream 189607 24681463 ~ 24682939 (+)
G274696 NA non-coding downstream 263326 24755182 ~ 24755384 (+)
LOC117599389 NA other upstream 258596 24226154 ~ 24232819 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other upstream 378562 24103073 ~ 24112853 (+)
cdc37l1 LOC108276758,LOC108433523 other upstream 551283 23937978 ~ 23940132 (+)
LOC113543986 rabgap1,LOC107686418,LOC107744072 other upstream 1105308 23281561 ~ 23386107 (+)
rc3h2 rc3h2,LOC108276736,LOC107595546,LOC106561687 other upstream 1216762 23244560 ~ 23274653 (+)
erbin erbin,erbb2ip other downstream 38122 24529978 ~ 24639642 (+)
zfand5b zfand5,LOC108277070,LOC108428885,LOC107742939,LOC107726558,LOC107705050,LOC107667265 other downstream 108006 24599862 ~ 24658701 (+)

Expression


Co-expression Network