G274646


Basic Information

Item Value
gene id G274646
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24582981 ~ 24583278 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325400
TTTAAGTGAGGTCTTTTAAtgaagttgtgtgtaaatgtttgtgtaaatcaAACTGAACTAAATATTTGTGCTGAAggtttcagaaacactgataTCCTTCGTATCTGTGTGCGTATGTTGGTGAACGCCGGTCACCTGTTTATTACCGCGTCCCTGCACGGAACAGCTGACTTGCGTttggtgacgcccacaaaactccataaactTTAAGTGCGataaggaaagaaaatgatttaacaTGAAAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325400 True 247 lncRNA 0.40 2 24582981 24583278

Neighbor

gene id symbol gene type direction distance location
nln nln,LOC107743138 coding upstream 57758 24503863 ~ 24525223 (+)
ppwd1 ppwd1 coding upstream 117881 24457036 ~ 24465100 (+)
cwc27 cwc27,LOC107744252,LOC107713303 coding upstream 223858 24310031 ~ 24359123 (+)
cops4 cops4,csn4,LOC107685106,LOC107558694 coding upstream 286256 24276082 ~ 24296725 (+)
LOC113544070 kiaa1958,LOC107683261,LOC106568575 coding upstream 330913 24233760 ~ 24252068 (+)
apba1b LOC108276879 coding downstream 135451 24718729 ~ 24733547 (+)
G274639 NA non-coding upstream 45245 24537130 ~ 24537736 (+)
G274624 NA non-coding upstream 91125 24491415 ~ 24491856 (+)
G274583 NA non-coding upstream 91780 24403023 ~ 24491201 (+)
G274457 lin54 non-coding upstream 321405 24257907 ~ 24261576 (+)
G274431 NA non-coding upstream 457768 24124736 ~ 24125213 (+)
G274653 NA non-coding downstream 68472 24651750 ~ 24652197 (+)
G274662 NA non-coding downstream 98185 24681463 ~ 24682939 (+)
G274696 NA non-coding downstream 171904 24755182 ~ 24755384 (+)
G274710 NA non-coding downstream 195783 24779061 ~ 24779322 (+)
G274714 NA non-coding downstream 199618 24782896 ~ 24783522 (+)
trappc13 trappc13,LOC107667267,LOC107726564 other upstream 84339 24480599 ~ 24498642 (+)
LOC117599389 NA other upstream 350162 24226154 ~ 24232819 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other upstream 470128 24103073 ~ 24112853 (+)
cdc37l1 LOC108276758,LOC108433523 other upstream 642849 23937978 ~ 23940132 (+)
LOC113543986 rabgap1,LOC107686418,LOC107744072 other upstream 1196874 23281561 ~ 23386107 (+)
zfand5b zfand5,LOC108277070,LOC108428885,LOC107742939,LOC107726558,LOC107705050,LOC107667265 other downstream 16584 24599862 ~ 24658701 (+)

Expression


Co-expression Network