G274653


Basic Information

Item Value
gene id G274653
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24651750 ~ 24652197 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325407
tgtgtgagagtgtgtgtgtgagagagtgtgtgtgagagtgtgtgtgtgagtgtgtgtgagttcactGCCGATGTGGATTTAATCTCCCGCTCGGTTCCGTTTCTGTTGGAACAGTTTAGTGAGAACCCACGCGTCTGTAGCAGAACTGCGCTCGGGTTCTGTGTGCGCTGTCCGGTTCCTGAACTCTCACTCACTGGAGTTCTGGGCTTCAGCCAGATAAACAGCAGGGTCTGTTAAACACAGGGAGggggaccacacacacacacacactatacactatacacacacacacacactacacacactatacactatacacacacacacacacacacacactatacactatacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325407 True 374 lncRNA 0.49 2 24651750 24652197

Neighbor

gene id symbol gene type direction distance location
nln nln,LOC107743138 coding upstream 126527 24503863 ~ 24525223 (+)
ppwd1 ppwd1 coding upstream 186650 24457036 ~ 24465100 (+)
cwc27 cwc27,LOC107744252,LOC107713303 coding upstream 292627 24310031 ~ 24359123 (+)
cops4 cops4,csn4,LOC107685106,LOC107558694 coding upstream 355025 24276082 ~ 24296725 (+)
LOC113544070 kiaa1958,LOC107683261,LOC106568575 coding upstream 399682 24233760 ~ 24252068 (+)
apba1b LOC108276879 coding downstream 66532 24718729 ~ 24733547 (+)
G274646 NA non-coding upstream 68472 24582981 ~ 24583278 (+)
G274639 NA non-coding upstream 114014 24537130 ~ 24537736 (+)
G274624 NA non-coding upstream 159894 24491415 ~ 24491856 (+)
G274583 NA non-coding upstream 160549 24403023 ~ 24491201 (+)
G274457 lin54 non-coding upstream 390174 24257907 ~ 24261576 (+)
G274662 NA non-coding downstream 29266 24681463 ~ 24682939 (+)
G274696 NA non-coding downstream 102985 24755182 ~ 24755384 (+)
G274710 NA non-coding downstream 126864 24779061 ~ 24779322 (+)
G274714 NA non-coding downstream 130699 24782896 ~ 24783522 (+)
G274704 NA non-coding downstream 132602 24784799 ~ 24808503 (+)
erbin erbin,erbb2ip other upstream 12108 24529978 ~ 24639642 (+)
trappc13 trappc13,LOC107667267,LOC107726564 other upstream 153108 24480599 ~ 24498642 (+)
LOC117599389 NA other upstream 418931 24226154 ~ 24232819 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other upstream 538897 24103073 ~ 24112853 (+)
cdc37l1 LOC108276758,LOC108433523 other upstream 711618 23937978 ~ 23940132 (+)

Expression


Co-expression Network