G274710


Basic Information

Item Value
gene id G274710
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24779061 ~ 24779322 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325470
tttttatcttgttttgtttttttggggtttaaTTTATCACTTATTTggtttagttatttatttatttttgaagaaaaacaccGGTGTAAGTGCACTGATTGATAAGGGGAGCCATGGCGTCTCTCTCAGGCGAGGGATCGCCAGGGCTCTCTATCAGGAACGGATGTAAAGTTTTCTCGGATCAAGCGTTTACGGTGGAAGACGTGCTTCTGGCAATGGGCGAGATTGTAGGGCATGAAAATATAGCATCGGCCTCCAGAAT

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU325470 True 262 lncRNA 0.42 1 24779061 24779322

Neighbor

gene id symbol gene type direction distance location
apba1b LOC108276879 coding upstream 45514 24718729 ~ 24733547 (+)
nln nln,LOC107743138 coding upstream 253838 24503863 ~ 24525223 (+)
ppwd1 ppwd1 coding upstream 313961 24457036 ~ 24465100 (+)
cwc27 cwc27,LOC107744252,LOC107713303 coding upstream 419938 24310031 ~ 24359123 (+)
cops4 cops4,csn4,LOC107685106,LOC107558694 coding upstream 482336 24276082 ~ 24296725 (+)
G274696 NA non-coding upstream 23677 24755182 ~ 24755384 (+)
G274662 NA non-coding upstream 96122 24681463 ~ 24682939 (+)
G274653 NA non-coding upstream 126864 24651750 ~ 24652197 (+)
G274646 NA non-coding upstream 195783 24582981 ~ 24583278 (+)
G274639 NA non-coding upstream 241325 24537130 ~ 24537736 (+)
G274714 NA non-coding downstream 3574 24782896 ~ 24783522 (+)
G274704 NA non-coding downstream 5477 24784799 ~ 24808503 (+)
zfand5b zfand5,LOC108277070,LOC108428885,LOC107742939,LOC107726558,LOC107705050,LOC107667265 other upstream 120360 24599862 ~ 24658701 (+)
erbin erbin,erbb2ip other upstream 139419 24529978 ~ 24639642 (+)
trappc13 trappc13,LOC107667267,LOC107726564 other upstream 280419 24480599 ~ 24498642 (+)
LOC117599389 NA other upstream 546242 24226154 ~ 24232819 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other upstream 666208 24103073 ~ 24112853 (+)

Expression


Co-expression Network