G274841


Basic Information

Item Value
gene id G274841
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24718931 ~ 24719131 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325645
CTGAGCTGCAGGAGTCCAGCTCTTTCCTCCTCACGCAGACTCCCTGAGCTCTGAGGAGTGTGTGAACGGACCACAGGCAAGAAGAAGGAGCTTTCTGACTGTGTATgtagtgatgaagatgatgtagtgattataaaatactacttaaATTAAACAGAACTGAATTCTACAGAACTCATTCCTTAGTTCACACTTCTCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325645 True 201 lncRNA 0.44 1 24718931 24719131

Neighbor

gene id symbol gene type direction distance location
mamdc2b LOC108277069 coding downstream 696 24698791 ~ 24718235 (-)
smc5 smc5,LOC107726549,LOC107734934 coding downstream 21079 24658808 ~ 24697852 (-)
sgtb sgtb,LOC107558703,LOC107667268,LOC107548671,LOC107705058 coding downstream 209371 24500862 ~ 24509560 (-)
trim23 trim23,LOC107658681 coding downstream 241855 24465097 ~ 24477076 (-)
adamts6 adamts6,LOC107685101,LOC107713302,LOC107744255 coding downstream 263976 24378185 ~ 24454955 (-)
tjp2a NA coding upstream 14417 24733548 ~ 24749451 (-)
pip5k1ba pip5k1b,LOC108428883,LOC107726562,LOC107705047,LOC107667273 coding upstream 42085 24761216 ~ 24777827 (-)
actr1 actr1,acty,LOC106585571,LOC105889177,LOC106563059,LOC107602067 coding upstream 74423 24793554 ~ 24797730 (-)
zgc:86599 zgc:86599,LOC108276884,LOC107718706,LOC107558099,LOC107758606,LOC107602047,LOC107689940 coding upstream 87291 24806422 ~ 24808492 (-)
LOC113525332 LOC108276880 coding upstream 91672 24810803 ~ 24844734 (-)
G274837 NA non-coding downstream 22820 24694573 ~ 24696111 (-)
G274808 NA non-coding downstream 40173 24596220 ~ 24678758 (-)
G274781 nln non-coding downstream 67258 24513288 ~ 24651673 (-)
G274856 NA non-coding upstream 30514 24749645 ~ 24749854 (-)
G274857 NA non-coding upstream 36049 24755180 ~ 24755382 (-)
G274858 NA non-coding upstream 60988 24780119 ~ 24780386 (-)
G274859 NA non-coding upstream 61830 24780961 ~ 24781675 (-)
G274853 NA non-coding upstream 80326 24799457 ~ 24803481 (-)
LOC113544170 plac8 other downstream 417899 24297476 ~ 24301032 (-)
inip inip,LOC107571239,LOC107658659,LOC107558675 other downstream 465619 24251548 ~ 24253312 (-)
nrarpa nrarp,nrarpa other downstream 855663 23859305 ~ 23863268 (-)
G274342 slc27a4 other downstream 916647 23798359 ~ 23802284 (-)
LOC113544130 rusc2 other downstream 3511761 21189969 ~ 21207170 (-)

Expression


Co-expression Network