il2rga (LOC108276805)


Basic Information

Item Value
gene id il2rga
gene name LOC108276805
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 341671 ~ 351928 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933041.2
gtgtgtgtgtgtgagtgtgtgtgtgtgcagtacagAGGAAGTTAACAggaagtcacacacacatgaagttgAAGAGCAACGAGTCGGAGGAAAGTTGAATGTCTACAGAAAGAtgtttttatcttcttttcTCACGTTTGTGTGGATTTGCTCGGGATCGGCTTCTTCTCCTCACCagaTCGAGTGCATGGTGGTGAATCTGGAGTATGTGAGCTGCACATGGGATGGAGACGGAACCGTGGCGGAGAACTACACCTTTAAAAGCagTTATAACAACCCGGATGCTCCTGCAGAGTGTTCCTCCTATCAGTACGTCAGGGAGGTTCGTGTCGGCTGTGTGGTTCCGTACAGTGAGAAGAAGCTGCAGAGATTCGACGAGTTTCATGCCTGGTTATACAGAGACAACATCACCCTGGCAAAACAAGAATATAAGAACCTGTTAAGCagggtgaagTTGAATGCGCCCAATAACGTGTCGTTGTTGTTGAGGGATCCGGAGCTGTGGATTTACTGGAACATTACCAGTAACGCTAAATCACAGTGTCAGGAGCGTGAACTTCGCTACAGGATCAACGGCAACAAGTGGAGTACTTACGGCACGAGCATGGAGAACGCCTTTAACGTGCCGTTTCCTAACGCTCAGAGTCTCTACGAGTTCCAGGTGAGAGTGCGCATTGCCTCGACCTGTGGACTGTCTGAACTGTGGAGCGAATGGAGCGAGCCGGTGTTCTGGGGCACCACCAAGAAGATTAACGATACAGagacgGGACGGCAGACGTCTGCGGGGCTGATGGTACTCTGCACGGTTGGAGCTGCTGTCGTCCTCATCGTGCTCGCCTGTCTGCTCATCCACAGCGAGAGACTCAGAGTGATCCTGGTTCCTGTTGTACCAAGTCCCAAAAATCTCGGAGATCTTATTGAGAGCTACAACGGAAATGTAGAGAAGTGGCTGCACATCTCCAAAGAGCTGCAGGACGGATTTAAGCCCAACTTTAGCGAGCGGCCCTGCACAGTGCGAGAGTTCAGGACGGAGTCTAACAGCGAGTCGGACAGTGACGACTGTCTCTCGGTGCACACGGCCGTCTCGTCTGACTATCAGTCCATGCAGAGCTACTCGTCCACCTCCACGCTGCCCTCTCCCTCCGAGACCCCCAGCACTGAAACCACGCCTCTCAACGGGCTGTAACGCCACAACGGCCAGGAGAAAAACACAACTGGAGTTTAAAATGTGGCTTACAGAAGTCAAAATCTGGATTAAAAAAgtcaatgaaatgaaatatactATTAATTATCCTGTTAAAAACTGGACTgtcaaactcacaatctacaATGAAAAAGTTTTAGCATATACACGTATACACATATAgacatatagatatatatatatatatatatatatagtatagagtaattatatatgtgaatatattaACATGAAACCgtatattcacattttattttattttcattctgcCTTGTAACATTCTGAATAATGCTGCTGTTTGTGAGCAGCCGCTGCTAAGACAAATGCAAAGAGAGCgtatccactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgcgtgtgtgtgtgcgcgagtgtgtgtgtgttatatgacTATATGCTTCAAACGCGTATACCTTTACTATAATGCTGAATATACAATGTTATCTGAGGCATGAAGGTGAAAAAAGCAACAGTTACTCTTTTTTTGCtaaaattattatgaaataaaatctgtttttata

Function

NR:

description
PREDICTED: cytokine receptor common subunit gamma-like isoform X2

GO: NA

KEGG:

id description
K05070 IL2RG, CD132; interleukin 2 receptor gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933041.2 True 1763 mRNA 0.46 8 341671 351928

Neighbor

gene id symbol gene type direction distance location
LOC113538163 LOC108276802 coding upstream 96253 226364 ~ 245418 (+)
znhit2 znhit2 coding upstream 272283 66588 ~ 69388 (+)
mrpl49 mrpl49,LOC107580894 coding upstream 275381 63779 ~ 66290 (+)
LOC113523717 c2cd2 coding downstream 108334 460262 ~ 476591 (+)
tbl2 tbl2,LOC107734476,LOC107691705,LOC107686137,LOC107728824 coding downstream 149294 501222 ~ 507099 (+)
cux1a LOC108276869,LOC106568027 coding downstream 224155 576083 ~ 612550 (+)
kctd7 kctd7,LOC106603469 coding downstream 263902 615830 ~ 621347 (+)
rabgef1 rabgef1 coding downstream 271458 623386 ~ 636006 (+)
G261090 NA non-coding upstream 14203 327262 ~ 327468 (+)
G261068 htatsf1,LOC108444522 non-coding upstream 31122 285248 ~ 310549 (+)
G261067 NA non-coding upstream 32952 308084 ~ 308719 (+)
G261044 NA non-coding upstream 63034 179740 ~ 278637 (+)
G261056 sssca1 non-coding upstream 88230 195667 ~ 253441 (+)
G261099 NA non-coding downstream 66761 418689 ~ 422040 (+)
G261106 NA non-coding downstream 70943 422871 ~ 423758 (+)
G261140 NA non-coding downstream 82415 434343 ~ 578767 (+)
G261101 NA non-coding downstream 165396 517324 ~ 615120 (+)
LOC117599335 ppm1e non-coding downstream 305477 657405 ~ 684364 (+)
LOC117599405 NA other upstream 29685 311476 ~ 311986 (+)
fgf13b fgf13b,fgf13,fgf13a,LOC108276808,LOC105907432,LOC107693932,LOC107720625,LOC107548853,LOC107084161,LOC107560535 other upstream 74898 254946 ~ 266773 (+)
wdr74 wdr74,LOC107548868 other upstream 236882 97689 ~ 104789 (+)
ska2 ska2,LOC108276801 other downstream 27092 379020 ~ 436298 (+)
G261104 NA other downstream 92839 444767 ~ 480711 (+)
prdm15 prdm15,LOC107578663,LOC108413920,LOC106512200,LOC106511912,LOC107728867,LOC107686138 other downstream 130460 482388 ~ 500186 (+)
bcl7ba bcl7b other downstream 155351 507279 ~ 569183 (+)
trim37 trim37,LOC107691657 other downstream 251798 603726 ~ 656209 (+)

Expression


Co-expression Network