Gene
RNA
| Item | Value |
|---|---|
| gene id | ubxn8 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 15914224 ~ 15919560 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| UBX domain-containing protein 8 |
| id | description |
|---|---|
| K24351 | UBXN8; UBX domain-containing protein 8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026941627.2 | True | 1173 | mRNA | 0.45 | 10 | 15914224 | 15919560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113543513 | LOC108277159,LOC108427265 | coding | upstream | 160333 | 15550925 ~ 15753891 (+) |
| apbb1 | apbb1 | coding | upstream | 429101 | 15474329 ~ 15485123 (+) |
| LOC113543573 | NA | coding | upstream | 440424 | 15462251 ~ 15473800 (+) |
| LOC113543572 | LOC108277262,LOC108424566,LOC105901058,LOC106603267,LOC105010780 | coding | upstream | 452150 | 15437154 ~ 15462074 (+) |
| aldh7a1 | aldh7a1 | coding | upstream | 592671 | 15310141 ~ 15321553 (+) |
| wrn | wrn | coding | downstream | 38998 | 15958558 ~ 15987780 (+) |
| nrg1 | nrg1 | coding | downstream | 73948 | 15993508 ~ 16075236 (+) |
| sh2d4a | sh2d4a | coding | downstream | 327391 | 16246951 ~ 16257688 (+) |
| ddx4 | ddx4 | coding | downstream | 359521 | 16279081 ~ 16292173 (+) |
| LOC113543581 | NA | coding | downstream | 379534 | 16299094 ~ 16310306 (+) |
| G269852 | NA | non-coding | upstream | 427661 | 15432044 ~ 15486563 (+) |
| G269642 | phax | non-coding | upstream | 609350 | 15299894 ~ 15304874 (+) |
| G269641 | NA | non-coding | upstream | 615897 | 15296544 ~ 15298327 (+) |
| G269635 | lmnb1 | non-coding | upstream | 624781 | 15279083 ~ 15289443 (+) |
| G269583 | NA | non-coding | upstream | 739732 | 15174268 ~ 15174492 (+) |
| G269989 | NA | non-coding | downstream | 2501 | 15922061 ~ 15929335 (+) |
| G269993 | NA | non-coding | downstream | 9882 | 15929442 ~ 15929868 (+) |
| G269994 | NA | non-coding | downstream | 10380 | 15929940 ~ 15930641 (+) |
| G269997 | tex15 | non-coding | downstream | 20945 | 15940505 ~ 15941293 (+) |
| G269998 | NA | non-coding | downstream | 21899 | 15941459 ~ 15941659 (+) |
| vps36 | vps36,LOC107701118 | other | upstream | 1143151 | 14762313 ~ 14771073 (+) |
| scaf4a | scaf4,LOC107555128 | other | upstream | 5031959 | 10865612 ~ 10882265 (+) |
| G266868 | LOC108276566 | other | upstream | 5343519 | 10569028 ~ 10570705 (+) |
| dclk1a | dclk1,LOC107728871,LOC107577778 | other | upstream | 6151527 | 9704360 ~ 9762697 (+) |
| LOC113543674 | NA | other | upstream | 6489369 | 9419665 ~ 9424855 (+) |
| trnar-ccu_11 | NA | other | downstream | 1168108 | 17087668 ~ 17087740 (+) |
| trnam-cau_40 | NA | other | downstream | 1168188 | 17087748 ~ 17087819 (+) |
| trnar-ccu_12 | NA | other | downstream | 1168889 | 17088449 ~ 17088521 (+) |
| trnam-cau_41 | NA | other | downstream | 1168969 | 17088529 ~ 17088600 (+) |
| trnar-ccu_13 | NA | other | downstream | 1169667 | 17089227 ~ 17089299 (+) |
