tpm2 (tpm2,LOC108276716,LOC108427282,LOC103044350,LOC107102752,LOC102218310,LOC103389160,LOC107670037,LOC108242564,LOC106571564,LOC107572193,LOC107394912,LOC107737084,LOC105894628)


Basic Information

Item Value
gene id tpm2
gene name tpm2,LOC108276716,LOC108427282,LOC103044350,LOC107102752,LOC102218310,LOC103389160,LOC107670037,LOC108242564,LOC106571564,LOC107572193,LOC107394912,LOC107737084,LOC105894628
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 16511235 ~ 16534943 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026941904.2
CTCTCGTTTTGGACAGGATTCCTGCCTCCCACACCGCCCAATCCCAGTCAGCCGCTGGACCTTCACTCTCCTGGAGCCCTCGGTGCTGTTCACTACTTCGCATCAGCCCTCCGCGTCTGCTCCCAGCTTTTCTCAGCGTGCGCGAGACACTGTCCCAAAGCAGCCACCATGGAGGCCATCAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAAAATGCCATAGACCGCGCCGAGCAGGCTGAAATGGACAAGAAAGGAGCAGAAGACAAATGCAAACAGctggAAGAGGAGCTTCAGGAACTGCAGAAGAAGCTGAAGGGTGTGGAGGATGAGTTGGATAAATACTCGGAGTCACTGAAGGATGCGCAAGAGAAGCTGGAGCAGGCTGAGAAGAAAGCCACAGACGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCTCGAGTCAGACAGCTGGAGGAGGAGCTTAGACTCATGGATCAGAATTTGAAGTCCATGATGTGCGGGGAGGAAGAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGAGAAACTAGCCCAGGCTAAAGAGGAGAACCTAGGCATGCACCAAGTGCTGGACCAGACTCTAATGGAGCTGAACAATTTATAAAGCGCAAAATCTGCGCCAAAAACAAGAGTCTTACATGGCATAGAGCTTCCCAGTGGAGCCCCATGCAGCAAACCTGTGCACACACATCCCTTAGAGGGGTAAGGTCTTAGTAGCTTTAGTTTGATAGATCCAGATGCCCTGAAATTACACTCTGCAATTTTATACCTATAGATAGACTCTCTGTGGTATATCTCTCTAAGACACAGGCCCATTTTATCAAGATTTTCTGAGTAGTTATAGTATCAGTAGTACATCCATCTGTACCAGTGAAATGACAGTGTCTGGCTTCGGAGTAGTTCTGACACATAAGACCAAAGTTATTATCTGTCTAATTACTAATAAGTGTTTGTTCTAACCAAGGAGCTGTTTACTCATTCATTAACAGTGAAGCTTTAACTACTCCACTGCCTTATCCCCTGTGCTTTAGTCATTCCAGTGCTTTACTCGACCAAAATATATCCAAatcaactgagggactcattgCATTTTATTATGGAACTTCAATTGATTTCTTAGTTTgctgtttatgtaacattaataTGGACTGATTTCATGTGTGTAAACAAAGCACAGAATTATGggtaatattgaatatttactgATTATCACCATCAAATTGACCACCTGCTCAGTTTAATTAGTGCTTCTATTGATGAATAATCCACCTGGAGATATTTATGACAGGTCATGAATCCATGTGCAGTTCACAGTTTCTCTACACTATTAGAGCTCACTAGAGAACTGTTTTTAGTACTTTTGGTCAACTTAagaaatttgttcattttatagtTACTAGTATGTGACAGGACCAGAACTCCTCTCAGAGTAGATGCAAGTGCCTGTTTACAGATGTGAAATCAGTCTACTCATATATTCACCAAAAATGGCCAAAGTCAATGCTGATTAAAATTACTATCAGTGTACTCTTCACCTAATTTTTGATTTCTGAATGTGGATCATTTTGAGAGTTCTACAAGTTTGTAATACTTCCTGTTTCATGCTGATTCCCCCTCAAATTTTACCATGATGTATTAAAACTGGTGCACATGCCACTGagttttttcactatttttaaaagcaggattttttttaaaaaagttgtgGCCTTTTAGAATAATTGATGGGAATGTGATTCTCTTGATCAGTTATAGCCCATTTTTAAAGCATCACCTAACTATGCAATTGTGTAAGCTCTTTGTTAAAGATGATTAAATTGTTGAATACAA
>XM_026941905.2
GCTCTCGTTTTGGACAGGATTCCTGCCTCCCACACCGCCCAATCCCAGTCAGCCGCTGGACCTTCACTCTCCTGGAGCCCTCGGTGCTGTTCACTACTTCGCATCAGCCCTCCGCGTCTGCTCCCAGCTTTTCTCAGCGTGCGCGAGACACTGTCCCAAAGCAGCCACCATGGAGGCCATCAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAAAATGCCATAGACCGCGCCGAGCAGGCTGAAATGGACAAGAAAGGAGCAGAAGACAAATGCAAACAGctggAAGAGGAGCTTCAGGAACTGCAGAAGAAGCTGAAGGGTGTGGAGGATGAGTTGGATAAATACTCGGAGTCACTGAAGGATGCGCAAGAGAAGCTGGAGCAGGCTGAGAAGAAAGCCACAGACGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCCAAATCTGGTGACCTTGAGGAAGAGTTGAAAAATGTCACCAACAACTTGAAGTCTTTGGAGGCCCAGGCAGAGAAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGAGAAACTAGCCCAGGCTAAAGAGGAGAACCTAGGCATGCACCAAGTGCTGGACCAGACTCTAATGGAGCTGAACAATTTATAAAGCGCAAAATCTGCGCCAAAAACAAGAGTCTTACATGGCATAGAGCTTCCCAGTGGAGCCCCATGCAGCAAACCTGTGCACACACATCCCTTAGAGGGGTAAGGTCTTAGTAGCTTTAGTTTGATAGATCCAGATGCCCTGAAATTACACTCTGCAATTTTATACCTATAGATAGACTCTCTGTGGTATATCTCTCTAAGACACAGGCCCATTTTATCAAGATTTTCTGAGTAGTTATAGTATCAGTAGTACATCCATCTGTACCAGTGAAATGACAGTGTCTGGCTTCGGAGTAGTTCTGACACATAAGACCAAAGTTATTATCTGTCTAATTACTAATAAGTGTTTGTTCTAACCAAGGAGCTGTTTACTCATTCATTAACAGTGAAGCTTTAACTACTCCACTGCCTTATCCCCTGTGCTTTAGTCATTCCAGTGCTTTACTCGACCAAAATATATCCAAatcaactgagggactcattgCATTTTATTATGGAACTTCAATTGATTTCTTAGTTTgctgtttatgtaacattaataTGGACTGATTTCATGTGTGTAAACAAAGCACAGAATTATGggtaatattgaatatttactgATTATCACCATCAAATTGACCACCTGCTCAGTTTAATTAGTGCTTCTATTGATGAATAATCCACCTGGAGATATTTATGACAGGTCATGAATCCATGTGCAGTTCACAGTTTCTCTACACTATTAGAGCTCACTAGAGAACTGTTTTTAGTACTTTTGGTCAACTTAagaaatttgttcattttatagtTACTAGTATGTGACAGGACCAGAACTCCTCTCAGAGTAGATGCAAGTGCCTGTTTACAGATGTGAAATCAGTCTACTCATATATTCACCAAAAATGGCCAAAGTCAATGCTGATTAAAATTACTATCAGTGTACTCTTCACCTAATTTTTGATTTCTGAATGTGGATCATTTTGAGAGTTCTACAAGTTTGTAATACTTCCTGTTTCATGCTGATTCCCCCTCAAATTTTACCATGATGTATTAAAACTGGTGCACATGCCACTGagttttttcactatttttaaaagcaggattttttttaaaaaagttgtgGCCTTTTAGAATAATTGATGGGAATGTGATTCTCTTGATCAGTTATAGCCCATTTTTAAAGCATCACCTAACTATGCAATTGTGTAAGCTCTTTGTTAAAGATGATTAAATTGTTGAATACAA
>XM_026941906.2
GCTCTCGTTTTGGACAGGATTCCTGCCTCCCACACCGCCCAATCCCAGTCAGCCGCTGGACCTTCACTCTCCTGGAGCCCTCGGTGCTGTTCACTACTTCGCATCAGCCCTCCGCGTCTGCTCCCAGCTTTTCTCAGCGTGCGCGAGACACTGTCCCAAAGCAGCCACCATGGAGGCCATCAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAAAATGCCATAGACCGCGCCGAGCAGGCTGAAATGGACAAGAAAGGAGCAGAAGACAAATGCAAACAGctggAAGAGGAGCTTCAGGAACTGCAGAAGAAGCTGAAGGGTGTGGAGGATGAGTTGGATAAATACTCGGAGTCACTGAAGGATGCGCAAGAGAAGCTGGAGCAGGCTGAGAAGAAAGCCACAGACGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCTCGAGTCAGACAGCTGGAGGAGGAGCTTAGACTCATGGATCAGAATTTGAAGTCCATGATGTGCGGGGAGGAAGAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGACGAGGTGTATGCTCAGAAGCTGAAGGGCAAAGCCCTCAGTGAGGAGCTGGATCTGGCTCTCAACGACATGACGACCCTTTAAATGCAATGTCTCGTCTTTTCTCCACTTGTGCTTTCTTCATCGTCCTTGTTTCCTCAGTTCTTCTTCTTTGGCGCTTCCTACATCTGGCTCATCTGGGGTTCACTTATTGTCATTGTCGCTTGTTTTTATATCCCTCCATTCCACTATTTAAATCAGATCCCAATCATAAAATTAGATTTCAGAAACTAATGCATAGTTTCTTAATAAATAAGTTTGATACTGCGTACCCCAGGGAGCCAGTCTGGATCCTaccttttttctttgctgtttttcGAGGTAGCAACACTGTGTTCTGTTTCATTACCTTTCTGTTTAGAAGATATTTCTCTTCTTGAGCTTTGCCAGTTCATCAGTGTTTACACATCTGCTGCATTGTTCTGCTGGAACTTGTTCAGTATttgttctctgtgtttctgtagtGCTTTATTTTCTCCCTCtgtaataaaaagcaaaaaaccctta
>XM_026941907.2
TGCTCTCGTTTTGGACAGGATTCCTGCCTCCCACACCGCCCAATCCCAGTCAGCCGCTGGACCTTCACTCTCCTGGAGCCCTCGGTGCTGTTCACTACTTCGCATCAGCCCTCCGCGTCTGCTCCCAGCTTTTCTCAGCGTGCGCGAGACACTGTCCCAAAGCAGCCACCATGGAGGCCATCAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAAAATGCCATAGACCGCGCCGAGCAGGCTGAAATGGACAAGAAAGGAGCAGAAGACAAATGCAAACAGctggAAGAGGAGCTTCAGGAACTGCAGAAGAAGCTGAAGGGTGTGGAGGATGAGTTGGATAAATACTCGGAGTCACTGAAGGATGCGCAAGAGAAGCTGGAGCAGGCTGAGAAGAAAGCCACAGACGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCCAAATCTGGTGACCTTGAGGAAGAGTTGAAAAATGTCACCAACAACTTGAAGTCTTTGGAGGCCCAGGCAGAGAAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGACGAGGTGTATGCTCAGAAGCTGAAGGGCAAAGCCCTCAGTGAGGAGCTGGATCTGGCTCTCAACGACATGACGACCCTTTAAATGCAATGTCTCGTCTTTTCTCCACTTGTGCTTTCTTCATCGTCCTTGTTTCCTCAGTTCTTCTTCTTTGGCGCTTCCTACATCTGGCTCATCTGGGGTTCACTTATTGTCATTGTCGCTTGTTTTTATATCCCTCCATTCCACTATTTAAATCAGATCCCAATCATAAAATTAGATTTCAGAAACTAATGCATAGTTTCTTAATAAATAAGTTTGATACTGCGTACCCCAGGGAGCCAGTCTGGATCCTaccttttttctttgctgtttttcGAGGTAGCAACACTGTGTTCTGTTTCATTACCTTTCTGTTTAGAAGATATTTCTCTTCTTGAGCTTTGCCAGTTCATCAGTGTTTACACATCTGCTGCATTGTTCTGCTGGAACTTGTTCAGTATttgttctctgtgtttctgtagtGCTTTATTTTCTCCCTCtgtaataaaaagcaaaaaaccctta
>XM_026941908.2
GTGTGTAACTTTTCTACAAAAGCGATTTTCTCCTTCGGCACAGCAAAGGCTCTTACATAGAGCTCTGAAACACAGTAAACGTCCTTTTTCATAACTCTCTCATGAAGAAGAaactttagtttagtttagtggTTTCAGGGTCCGGAGGTGGCCCAAggctacctctctctctctctctctctctctctctctctctctctctctctctctgtgcagtcCAAGGTGTCTGGGTTGTAGATTAGTGGCGAAAGCGAGcgactaacaaaaaaaaaacaaaaaaaaaaaacaaaaacagcccTTTGGTTAGTGTCGGATTGAATGGCCGGAATGTCCTCCATCGAGGCTGTGAAAAGGAAAATCCAGAGTCTGCAGCAGCAGGCGGACGACGCAGAGGACCGAGCCGAGGCGCTTCAGAGAGAGGTGGACTCAGAGAGACATGCCAGGGAGAGGGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCTCGAGTCAGACAGCTGGAGGAGGAGCTTAGACTCATGGATCAGAATTTGAAGTCCATGATGTGCGGGGAGGAAGAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGAGAAACTAGCCCAGGCTAAAGAGGAGAACCTAGGCATGCACCAAGTGCTGGACCAGACTCTAATGGAGCTGAACAATTTATAAAGCGCAAAATCTGCGCCAAAAACAAGAGTCTTACATGGCATAGAGCTTCCCAGTGGAGCCCCATGCAGCAAACCTGTGCACACACATCCCTTAGAGGGGTAAGGTCTTAGTAGCTTTAGTTTGATAGATCCAGATGCCCTGAAATTACACTCTGCAATTTTATACCTATAGATAGACTCTCTGTGGTATATCTCTCTAAGACACAGGCCCATTTTATCAAGATTTTCTGAGTAGTTATAGTATCAGTAGTACATCCATCTGTACCAGTGAAATGACAGTGTCTGGCTTCGGAGTAGTTCTGACACATAAGACCAAAGTTATTATCTGTCTAATTACTAATAAGTGTTTGTTCTAACCAAGGAGCTGTTTACTCATTCATTAACAGTGAAGCTTTAACTACTCCACTGCCTTATCCCCTGTGCTTTAGTCATTCCAGTGCTTTACTCGACCAAAATATATCCAAatcaactgagggactcattgCATTTTATTATGGAACTTCAATTGATTTCTTAGTTTgctgtttatgtaacattaataTGGACTGATTTCATGTGTGTAAACAAAGCACAGAATTATGggtaatattgaatatttactgATTATCACCATCAAATTGACCACCTGCTCAGTTTAATTAGTGCTTCTATTGATGAATAATCCACCTGGAGATATTTATGACAGGTCATGAATCCATGTGCAGTTCACAGTTTCTCTACACTATTAGAGCTCACTAGAGAACTGTTTTTAGTACTTTTGGTCAACTTAagaaatttgttcattttatagtTACTAGTATGTGACAGGACCAGAACTCCTCTCAGAGTAGATGCAAGTGCCTGTTTACAGATGTGAAATCAGTCTACTCATATATTCACCAAAAATGGCCAAAGTCAATGCTGATTAAAATTACTATCAGTGTACTCTTCACCTAATTTTTGATTTCTGAATGTGGATCATTTTGAGAGTTCTACAAGTTTGTAATACTTCCTGTTTCATGCTGATTCCCCCTCAAATTTTACCATGATGTATTAAAACTGGTGCACATGCCACTGagttttttcactatttttaaaagcaggattttttttaaaaaagttgtgGCCTTTTAGAATAATTGATGGGAATGTGATTCTCTTGATCAGTTATAGCCCATTTTTAAAGCATCACCTAACTATGCAATTGTGTAAGCTCTTTGTTAAAGATGATTAAATTGTTGAATACAA
>XM_026941909.2
GGAGTGTGTAACTTTTCTACAAAAGCGATTTTCTCCTTCGGCACAGCAAAGGCTCTTACATAGAGCTCTGAAACACAGTAAACGTCCTTTTTCATAACTCTCTCATGAAGAAGAaactttagtttagtttagtggTTTCAGGGTCCGGAGGTGGCCCAAggctacctctctctctctctctctctctctctctctctctctctctctctctctgtgcagtcCAAGGTGTCTGGGTTGTAGATTAGTGGCGAAAGCGAGcgactaacaaaaaaaaaacaaaaaaaaaaaacaaaaacagcccTTTGGTTAGTGTCGGATTGAATGGCCGGAATGTCCTCCATCGAGGCTGTGAAAAGGAAAATCCAGAGTCTGCAGCAGCAGGCGGACGACGCAGAGGACCGAGCCGAGGCGCTTCAGAGAGAGGTGGACTCAGAGAGACATGCCAGGGAGAGGGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCCAAATCTGGTGACCTTGAGGAAGAGTTGAAAAATGTCACCAACAACTTGAAGTCTTTGGAGGCCCAGGCAGAGAAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGAGAAACTAGCCCAGGCTAAAGAGGAGAACCTAGGCATGCACCAAGTGCTGGACCAGACTCTAATGGAGCTGAACAATTTATAAAGCGCAAAATCTGCGCCAAAAACAAGAGTCTTACATGGCATAGAGCTTCCCAGTGGAGCCCCATGCAGCAAACCTGTGCACACACATCCCTTAGAGGGGTAAGGTCTTAGTAGCTTTAGTTTGATAGATCCAGATGCCCTGAAATTACACTCTGCAATTTTATACCTATAGATAGACTCTCTGTGGTATATCTCTCTAAGACACAGGCCCATTTTATCAAGATTTTCTGAGTAGTTATAGTATCAGTAGTACATCCATCTGTACCAGTGAAATGACAGTGTCTGGCTTCGGAGTAGTTCTGACACATAAGACCAAAGTTATTATCTGTCTAATTACTAATAAGTGTTTGTTCTAACCAAGGAGCTGTTTACTCATTCATTAACAGTGAAGCTTTAACTACTCCACTGCCTTATCCCCTGTGCTTTAGTCATTCCAGTGCTTTACTCGACCAAAATATATCCAAatcaactgagggactcattgCATTTTATTATGGAACTTCAATTGATTTCTTAGTTTgctgtttatgtaacattaataTGGACTGATTTCATGTGTGTAAACAAAGCACAGAATTATGggtaatattgaatatttactgATTATCACCATCAAATTGACCACCTGCTCAGTTTAATTAGTGCTTCTATTGATGAATAATCCACCTGGAGATATTTATGACAGGTCATGAATCCATGTGCAGTTCACAGTTTCTCTACACTATTAGAGCTCACTAGAGAACTGTTTTTAGTACTTTTGGTCAACTTAagaaatttgttcattttatagtTACTAGTATGTGACAGGACCAGAACTCCTCTCAGAGTAGATGCAAGTGCCTGTTTACAGATGTGAAATCAGTCTACTCATATATTCACCAAAAATGGCCAAAGTCAATGCTGATTAAAATTACTATCAGTGTACTCTTCACCTAATTTTTGATTTCTGAATGTGGATCATTTTGAGAGTTCTACAAGTTTGTAATACTTCCTGTTTCATGCTGATTCCCCCTCAAATTTTACCATGATGTATTAAAACTGGTGCACATGCCACTGagttttttcactatttttaaaagcaggattttttttaaaaaagttgtgGCCTTTTAGAATAATTGATGGGAATGTGATTCTCTTGATCAGTTATAGCCCATTTTTAAAGCATCACCTAACTATGCAATTGTGTAAGCTCTTTGTTAAAGATGATTAAATTGTTGAATACAA
>XM_026941910.2
TGGAGTGTGTAACTTTTCTACAAAAGCGATTTTCTCCTTCGGCACAGCAAAGGCTCTTACATAGAGCTCTGAAACACAGTAAACGTCCTTTTTCATAACTCTCTCATGAAGAAGAaactttagtttagtttagtggTTTCAGGGTCCGGAGGTGGCCCAAggctacctctctctctctctctctctctctctctctctctctctctctctctctgtgcagtcCAAGGTGTCTGGGTTGTAGATTAGTGGCGAAAGCGAGcgactaacaaaaaaaaaacaaaaaaaaaaaacaaaaacagcccTTTGGTTAGTGTCGGATTGAATGGCCGGAATGTCCTCCATCGAGGCTGTGAAAAGGAAAATCCAGAGTCTGCAGCAGCAGGCGGACGACGCAGAGGACCGAGCCGAGGCGCTTCAGAGAGAGGTGGACTCAGAGAGACATGCCAGGGAGAGGGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCTCGAGTCAGACAGCTGGAGGAGGAGCTTAGACTCATGGATCAGAATTTGAAGTCCATGATGTGCGGGGAGGAAGAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGACGAGGTGTATGCTCAGAAGCTGAAGGGCAAAGCCCTCAGTGAGGAGCTGGATCTGGCTCTCAACGACATGACGACCCTTTAAATGCAATGTCTCGTCTTTTCTCCACTTGTGCTTTCTTCATCGTCCTTGTTTCCTCAGTTCTTCTTCTTTGGCGCTTCCTACATCTGGCTCATCTGGGGTTCACTTATTGTCATTGTCGCTTGTTTTTATATCCCTCCATTCCACTATTTAAATCAGATCCCAATCATAAAATTAGATTTCAGAAACTAATGCATAGTTTCTTAATAAATAAGTTTGATACTGCGTACCCCAGGGAGCCAGTCTGGATCCTaccttttttctttgctgtttttcGAGGTAGCAACACTGTGTTCTGTTTCATTACCTTTCTGTTTAGAAGATATTTCTCTTCTTGAGCTTTGCCAGTTCATCAGTGTTTACACATCTGCTGCATTGTTCTGCTGGAACTTGTTCAGTATttgttctctgtgtttctgtagtGCTTTATTTTCTCCCTCtgtaataaaaagcaaaaaaccctta
>XM_026941911.2
CAGTGGAGTGTGTAACTTTTCTACAAAAGCGATTTTCTCCTTCGGCACAGCAAAGGCTCTTACATAGAGCTCTGAAACACAGTAAACGTCCTTTTTCATAACTCTCTCATGAAGAAGAaactttagtttagtttagtggTTTCAGGGTCCGGAGGTGGCCCAAggctacctctctctctctctctctctctctctctctctctctctctctctctctgtgcagtcCAAGGTGTCTGGGTTGTAGATTAGTGGCGAAAGCGAGcgactaacaaaaaaaaaacaaaaaaaaaaaacaaaaacagcccTTTGGTTAGTGTCGGATTGAATGGCCGGAATGTCCTCCATCGAGGCTGTGAAAAGGAAAATCCAGAGTCTGCAGCAGCAGGCGGACGACGCAGAGGACCGAGCCGAGGCGCTTCAGAGAGAGGTGGACTCAGAGAGACATGCCAGGGAGAGGGCAGAGGCTGAGGTGGCCTCCCTGAACAGACGTATCCAGCTGGTTGAGGAGGAGTTGGACAGGGCCCAGGAGAGACTGGCCACCGCACTGCAGAAACTCGAGGAGGCAGAAAAAGCTGCAGATGAGAGCGAGAGAGGAATGAAGGTCATTGAGAACAGAGCAACGAAAGATGAGGAGAAGATGGAGCTTCAGGAGATGCAGCTGAAGGAGGCCAAACACATTGCTGAGGAGGCTGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCCTTGAGGGTGACCTTGAGCGTTCTGAAGAGCGTGCTGAGGTGGCTGAGGCCAAATCTGGTGACCTTGAGGAAGAGTTGAAAAATGTCACCAACAACTTGAAGTCTTTGGAGGCCCAGGCAGAGAAGTACTCAACAAAAGAAGACAAATATGAAGAGGAAATCAAAGTGCTCACTGAAAAGCTGAAAGAGGCTGAGACTCGTGCTGAGTTTGCAGAGAGGTCTGTGGCTAAACTTGAGAAGACCATTGATGATTTGGAAGACGAGGTGTATGCTCAGAAGCTGAAGGGCAAAGCCCTCAGTGAGGAGCTGGATCTGGCTCTCAACGACATGACGACCCTTTAAATGCAATGTCTCGTCTTTTCTCCACTTGTGCTTTCTTCATCGTCCTTGTTTCCTCAGTTCTTCTTCTTTGGCGCTTCCTACATCTGGCTCATCTGGGGTTCACTTATTGTCATTGTCGCTTGTTTTTATATCCCTCCATTCCACTATTTAAATCAGATCCCAATCATAAAATTAGATTTCAGAAACTAATGCATAGTTTCTTAATAAATAAGTTTGATACTGCGTACCCCAGGGAGCCAGTCTGGATCCTaccttttttctttgctgtttttcGAGGTAGCAACACTGTGTTCTGTTTCATTACCTTTCTGTTTAGAAGATATTTCTCTTCTTGAGCTTTGCCAGTTCATCAGTGTTTACACATCTGCTGCATTGTTCTGCTGGAACTTGTTCAGTATttgttctctgtgtttctgtagtGCTTTATTTTCTCCCTCtgtaataaaaagcaaaaaaccctta

Function

symbol description
tpm2 Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization and muscle contraction. Located in striated muscle thin filament. Is expressed in adaxial cell; cardiovascular system; epiphysis; musculature system; and somite. Human ortholog(s) of this gene implicated in distal arthrogryposis type 1A and nemaline myopathy 4. Orthologous to human TPM2 (tropomyosin 2).

NR:

description
PREDICTED: tropomyosin beta chain isoform X1

GO:

id name namespace
GO:0005865 striated muscle thin filament cellular_component

KEGG:

id description
K10375 TPM4; tropomyosin 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026941904.2 False 2249 mRNA 0.43 9 16511237 16534943
XM_026941905.2 False 2250 mRNA 0.43 9 16511236 16534943
XM_026941906.2 False 1486 mRNA 0.48 9 16511236 16530219
XM_026941907.2 False 1487 mRNA 0.48 9 16511235 16530219
XM_026941908.2 False 2291 mRNA 0.42 8 16518237 16534943
XM_026941909.2 True 2294 mRNA 0.42 8 16518234 16534943
XM_026941910.2 False 1531 mRNA 0.46 8 16518233 16530219
XM_026941911.2 False 1534 mRNA 0.46 8 16518230 16530219

Neighbor

gene id symbol gene type direction distance location
tln1 tln1 coding upstream 3599 16433574 ~ 16507636 (+)
hmgcs1 hmgcs1,LOC108277226,LOC108427280,LOC107715876 coding upstream 82012 16420040 ~ 16429223 (+)
map3k1 map3k1 coding upstream 93462 16378393 ~ 16417773 (+)
LOC113543581 NA coding upstream 200929 16299094 ~ 16310306 (+)
ddx4 ddx4 coding upstream 219062 16279081 ~ 16292173 (+)
zgc:114200 aph1a,LOC108427283,LOC100304952,LOC107572194,LOC107670051 coding downstream 3826 16538769 ~ 16552518 (+)
reep5 reep5,LOC108246451 coding downstream 48093 16583036 ~ 16589994 (+)
LOC113543669 LOC108276552 coding downstream 56950 16591893 ~ 16594397 (+)
trnam-cau_35 NA coding downstream 89966 16624909 ~ 16624980 (+)
trnar-ccu_8 NA coding downstream 90457 16625400 ~ 16625472 (+)
G270525 NA non-coding upstream 488 16510543 ~ 16510747 (+)
G270520 NA non-coding upstream 125303 16385030 ~ 16385932 (+)
LOC117599337 NA non-coding upstream 146493 16327619 ~ 16364742 (+)
G270495 NA non-coding upstream 159776 16351248 ~ 16351459 (+)
G270449 NA non-coding upstream 182463 16328511 ~ 16328772 (+)
G270536 dcp2,LOC107564107,LOC107702577 non-coding downstream 41420 16576363 ~ 16577240 (+)
G270626 NA non-coding downstream 91041 16625984 ~ 16626358 (+)
G270716 NA non-coding downstream 262902 16797845 ~ 16798435 (+)
G270833 NA non-coding downstream 526038 17060981 ~ 17078555 (+)
G270856 NA non-coding downstream 552452 17087395 ~ 17087922 (+)
vps36 vps36,LOC107701118 other upstream 1740162 14762313 ~ 14771073 (+)
scaf4a scaf4,LOC107555128 other upstream 5628970 10865612 ~ 10882265 (+)
G266868 LOC108276566 other upstream 5940530 10569028 ~ 10570705 (+)
dclk1a dclk1,LOC107728871,LOC107577778 other upstream 6748538 9704360 ~ 9762697 (+)
LOC113543674 NA other upstream 7086380 9419665 ~ 9424855 (+)
trnar-ccu_11 NA other downstream 552725 17087668 ~ 17087740 (+)
trnam-cau_40 NA other downstream 552805 17087748 ~ 17087819 (+)
trnar-ccu_12 NA other downstream 553506 17088449 ~ 17088521 (+)
trnam-cau_41 NA other downstream 553586 17088529 ~ 17088600 (+)
trnar-ccu_13 NA other downstream 554284 17089227 ~ 17089299 (+)

Expression


Co-expression Network