tmem267 (tmem267,si:busm1-79m10.4,LOC107653487,LOC107702605,LOC107554852)


Basic Information

Item Value
gene id tmem267
gene name tmem267,si:busm1-79m10.4,LOC107653487,LOC107702605,LOC107554852
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 17751578 ~ 17758223 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942456.2
GCCCCGCCCACACGCTTTGCCGGAGAGATGTGAGGCGAACGTGTACttgctgtaaacacacataaGAAGCAAGACGGCAGGAGGAAAGTCGCTGGAGCGGCTAGAATGTTGTGACTCAACGCAGCGGAAGTGGTGTCTGAGCCCCGGTGTGGCCGAGGCGGATGATGCGGGGTTTGCGCTCCAGGTCGGACTCCATGGCCGTGCCGTTAAACTCGGCTGTGGAGACAGAAAAGGCGCAGGCGCTGCTCCAGACGTTCAGCACTGCATCTCTGCTGGCCAGCGCTGGACTCGGAGCCTTCTGCCTCATAGCCGATGCCGTTCTGAACTCGCCATTTATCCAGGAGCACGCGTGGCTCAGGGCACTGCTGGACAACTCAGTACATGGCCTGATCGCGCTCTGGTCTTGGGCCATCGTCATTGGCCTCAGGAAGAAGAGCGACTTTTATGAAGTGTTGCTGGCTGGCTTCCTCGCCTCCTCCATCGACCTGGACCACTTCTACATGGCCGGATCACTGTCACTTAAAgcagCTCTGAACCTGCCGCGGCGTCCTCCGCTTCACTGCTCCACGCTGGTTCCGGTGCTCTGCTTCTCACTGCGCCTGCTCATGTGGGCGTGCAGGCTGAAGGACTCTTGGTGTTCGCTGCCCTGGCTGCTCTTCATCTCTCTGGCGTCACACCACATACGGGACGGAGTGCGCCACGGCTTGTGGCTCTGGCCCTTCGCCAACACACCGCCAATCTCCTACTGGCTGTACGTCACCATCACGGCCACCCTCCCCCACCTCTGTTCTGTGCTCATGTACCTGACCGGCACTAGAGACATGATTTCTACTAAGCACGGCGTAGCCATCGACGTCTGATCCGAGTGCTTAACATACGATGTGCGATACTGTTCTTTGTTCCTCTCCAAGGAAATTTTTTGCACTGCAGTTGTGTGACCTGAACTTCTGGAGTTCAGCAGCACCTCACTTACAACTGCAAGTCCTTTTTGTCCCTTTATGTAATTTAACCAGCTCATCAGGTGTCACTTTGCTATCAGGGTTTACTGACTGCTCTAATTGGAACTGTATATATGAACAATTTATAATCTCAAAAGAGACAGAAGCTCTCTTTTTGAAGGAATCTTTGCCAATCTTTGCCATACCAAGTCCACTTGTCTGTGATATTTTCATCATcaaatttttttcttgcattgGTTTTAAGTCATCTTCAAGAGTGACCAAGTAGAGGAAGAGAATTTGCTAGATGATGCTCTTTAAAGATACGTTTCAGCCCAGAACTGAAATCTACACAATTTCCATACTCATCCAGGTTGCATTGTGCTAAAACTGGTAGCTCTAAGCTTCCATCATTTGTCCATCAGCTTTAGCCTCTAACCCTAAGCAGAGCTCATGCAACAAACATGTTGTTTGACTAGATTTGGAGTAAGGGCAAAATTTTGAGGTTCCTTTAAATGCTGTCCCATGTCCAGGGTAGTACAAAGATGTTGTAGTAGCCATCAGGATAGCACAGATTCTGCCATCAGTGATCAAAACCTACAGCCAACCTGACAACCTTATGACCTGAATACATGCAAACAAGCTCAGATAATTAATCATCGTGAGAGACAAAATTAACTATGTTTACATATGAATACTTGCTTTGTGTAGTAACAGTGTGTAAAGATTGAGTAAGAAGGGTTGCTTTAGGTGAAAGTGAATCTGAGATGCTTACTGTTCCAAGATAGAAGAGAAGTATGAGTTACCCACCAGTCTGTTTAGAGAGTATTAGATACAGTGCAGTCTGAAGGTAACTGGACAGTGCACATCTTCCCACTATTGATCATATATATCATAAGAATCAACACATCCAATATTGTTATTGTGGTCGCTTCAAAATATGACTACTACAGCAAACACATGCAGATATTTCGATTAGCTGCCACTACCTGCTGTGAGCTTTTTTAatccattgattttttttaatctacttGTGCTCTTATTGTGTCAGTGTTTGAAATCTTGTTTTctgaagattctgaagcttgtggccagaaaagtgttcaGACGTGCTGTAGATTGTGGGTGGAGCATAAACACATAGCCATGTTTTACATAAAAGTTTTAAACAAGATCATAAACCATGATAAAAGCTAGTGAattatgatgtgatgtgaaaggctagttttttgtttctgtttagcATGATAATGTTTTGCTTTAAATCCAGTGTCCTGTGGTTCAATACAACTAAAATCATTTCTGTCCAATTACTTCCAGACCGCATTGTTCATCTCCACGAGTCTGCTGAACTGAAACTGGTTCTCTGGAAGTCGCAAATGTGGTTGTTGTACTCTCTTTATGCCATTTGCAAACAAGCATAGTATCATGAGCTTGTATCACAAATTCCCTTATTCCCTTGATATCCCTTATCAATAACAGTGTTTAATAGTTtgttaaaattcatatttagtGTGTAATCTGAGATGAAGGACCAGCAAGAAGTGAGTGATCAACAGGCAgtgttaaagaaaagaaaaacaaattaatgaCTCAGAtgagtgaggtttttttttccctgtctctAGGACATTGACGATTACTGTAAATAACAACTAGCTAGTTAGTctacactgttactttagaggaaaagaaatgaaaatgaacaaaccCATCCTTAAAGAGACTTTGATGAACCTCCCCCAGATGTCTGATTCATACTGGAGTTTATGTTAcacttgtttcttgttttccGTATGTTTGTATTCACTGAATTTCTTTGCTTTAAACCATGTGAAAATAATCTCTGTTCTCAGCAGTGTAGATTCTGCCGGATAAAAACAGGGCTGGACATTTCAGTGTCGTTGCTGTATTCATCACAGAACCCAGGAATCAAGATTTAAAGCGATTATTTCCCTCAGATATGGACAGAAATGTGTATTttgtccagcagggggcagcagtGCACTACAGGTAGTTTTTATGTTTGCGTACTGTTATAACGCCACTGTGTAACTGTACAGATGGtttcattttgcacatttaatttATGTATTGTGTTAATGTCttttgtcatttgttaataTCCTGTTAAGTAATTGTCTTAATTTATTATCGACGAAGAACGTGTGCTCCAGGACTAATCTTTAACTTGAGCTGATCACAGCACTTGCATGACTACAGCCCATCAGGGCCATCATGTCAGGTGAAGAGAAAATCATGTGCACTTTTTATTTGTGAACACTGTGTGCCGGGTTTATTTCAGGATTAAATTTGAGGAACATTCCA

Function

symbol description
tmem267 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM267 (transmembrane protein 267).

NR:

description
transmembrane protein 267

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942456.2 True 3266 mRNA 0.43 3 17751578 17758223

Neighbor

gene id symbol gene type direction distance location
rassf6 rassf6 coding upstream 7982 17728618 ~ 17743596 (+)
lpar1 lpar1,LOC107554848,LOC107723319 coding upstream 62582 17665665 ~ 17688996 (+)
LOC113544058 epha5,LOC108428864,LOC107702602 coding upstream 141993 17552931 ~ 17609585 (+)
plppr1 plppr1,LOC107702599,LOC107653496,LOC107710008,LOC107750956,LOC102776600,LOC106568589 coding upstream 354761 17355099 ~ 17396817 (+)
snx30 snx30,LOC107569385 coding upstream 539455 17189955 ~ 17212123 (+)
sigmar1 sigmar1,LOC107573076,LOC107653128 coding downstream 457360 18215583 ~ 18218914 (+)
katnal2 katnal2,LOC107573073,LOC102797751 coding downstream 462545 18220768 ~ 18231104 (+)
hdhd2 hdhd2,LOC107738843,LOC107743237 coding downstream 477146 18235369 ~ 18240105 (+)
LOC113543970 LOC108276577,LOC108262336 coding downstream 607847 18366070 ~ 18372136 (+)
si:dkey-88l16.3 LOC108277154 coding downstream 614489 18372712 ~ 18398037 (+)
G271076 NA non-coding upstream 60717 17689656 ~ 17690861 (+)
G270913 NA non-coding upstream 362599 17361945 ~ 17388979 (+)
G270893 NA non-coding upstream 458695 17277656 ~ 17292883 (+)
G270873 scd5 non-coding upstream 602159 17136712 ~ 17149419 (+)
G270872 NA non-coding upstream 611005 17129692 ~ 17140573 (+)
G271102 NA non-coding downstream 1327 17759550 ~ 17764529 (+)
G271104 NA non-coding downstream 11546 17769769 ~ 17773380 (+)
G271235 NA non-coding downstream 366599 18124822 ~ 18125792 (+)
G271340 NA non-coding downstream 539899 18298122 ~ 18348384 (+)
LOC117599343 NA non-coding downstream 667849 18426072 ~ 18427190 (+)
si:ch73-234b20.5 LOC108276836,LOC108440734 other upstream 650509 17099096 ~ 17101069 (+)
trnam-cau_42 NA other upstream 662200 17089307 ~ 17089378 (+)
trnar-ccu_13 NA other upstream 662279 17089227 ~ 17089299 (+)
trnam-cau_41 NA other upstream 662978 17088529 ~ 17088600 (+)
trnar-ccu_12 NA other upstream 663057 17088449 ~ 17088521 (+)
G271406 NA other downstream 646046 18404269 ~ 18407498 (+)
G271863 NA other downstream 1483486 19241709 ~ 19243905 (+)
LOC113544086 LOC108261382,LOC108276944,LOC108262018 other downstream 1617869 19376092 ~ 19414627 (+)
LOC113544004 LOC108276941 other downstream 1730983 19489206 ~ 19520777 (+)
LOC113543969 NA other downstream 2024204 19782427 ~ 19786831 (+)

Expression


Co-expression Network