plpp5 (plpp5,LOC108440555)


Basic Information

Item Value
gene id plpp5
gene name plpp5,LOC108440555
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 18900339 ~ 18906189 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942471.2
TGACTGCTGACGTTCTGAGCTCGTGAAACGTAACGCTCGTGCGAGTTCTGAGCTCGTGAAACGTAACGCTCGTGCGAGTTCTAAAGCTTGGAGATGCCAAAATGCAGCGCACCCGCGACTAATGACGTCATGATTGCGTGGCATGGAACATTTGTGCGAGTTCTGATGTTCTGACTGCGTGACATGGAACTCGTAAGTGAAGCAAGCGACTGGGACACACCAGATCCAAAGATGAGGAAGAGTATAGACCAGGAGTTCATCGCTGAAGTGGTCATCcgcctgctgctgctggctgTCTTTTTAGTGACTGAGCAACTGGCTCCGTTTACCCGACAGATCCAGCCTGAGGAAATCTGGCTTTACAGGTTCCACCATGTGAAGAATGACCACATTCCTACCTCACTCATGTTTAGCATTGCTCTCTTTACACCACTGGCCACCATTCTGTTTTTTGCATTCCTGAGAAGAACTGAAAAAGGGGAGATTAAGGAGGCTTCGTTAGCTGTGACCTTGACTCTGCTCCTGAACGGAGTTTTCACCAATGCTGTAAAGCTCACTGTGGGAAGgCCACGTCCAGATTTCTTCTACCGCTGCTTTCCAGATGGTCAGATGAACCCAGAGTTTCAGTGCAGCGGCGACCCAGAAATGGTCACGGAGGGGAGGAAGAGTTTCCCCAGCGGACACTCATCGTTTGCATTTGCCGGACTGGGCTTTACGGCACTTTTCATAGCTGGGAAGCTTCACTGTTTCAGTCCAGCTGGTCGGGGAAAAGCATGgcgtctgtgtgtgttcctcacacCTCTACTCTGTGCTGTTTTGATCGCTGTCTCCAGAACTTGTGACTACAAACATCACTGGCAAGATGTGTTAGTGGGATCACTGCTGGGTTTGACCTTCTCGTACCTTTGTTACAGACAACATTATCCATCACTCACCGAGTCCGATTCCCATAAACCCCTGAGGATCAGAGACACAACACCCTCAGCACAGGAACGCAAACAAGCCACTGCAGGATTCCTTTTGCCTCTGTAGGGATGCCAGTAGCACTTAAACTACTCCTGAAATGTGTGATGGACATGTTCTCATGCACAGCCCTTAAGCTAATGCTGccaatatgtgtatatgtgagtgtgagtgcgaGACCTAGGAGTCTCTGTTTCCATTTGGCCTTCTTAAGaacatatatacattaaaaaaaaaagaaagaaagaaatactttGTGTATTGTAGATATTTGGATTTGTATTGGACCATGAACAGCCTGGGGTTTCTGCATCAGGTTTCGAATATCTGTTTGAATATCATGTATGTCTCTCgttcactgtgtttataatGGGGTCTatcaataaaatgtttgtaaagtTTG
>XM_026942472.2
TCCTAACCACCTGCAGGTGGCGTGAGAACTGTGTGACGTGTAAAcgtgtctcttctctctctctgtgccagCCTGCACTCTCCTCACCAGGAGAGGGAGAGGATCCGCATCTTCACGCATCAGCCACTTTGGACATGAAGGATCTGTTTACTTATACATGACGGGCCTCACCAAACCCGTCTCGCGCGGCTGCTTCCGGTGTAAGACGGGCTGAAAAAAGGAGCGAATCATAAAGGTGAAGCAAGCGACTGGGACACACCAGATCCAAAGATGAGGAAGAGTATAGACCAGGAGTTCATCGCTGAAGTGGTCATCcgcctgctgctgctggctgTCTTTTTAGTGACTGAGCAACTGGCTCCGTTTACCCGACAGATCCAGCCTGAGGAAATCTGGCTTTACAGGTTCCACCATGTGAAGAATGACCACATTCCTACCTCACTCATGTTTAGCATTGCTCTCTTTACACCACTGGCCACCATTCTGTTTTTTGCATTCCTGAGAAGAACTGAAAAAGGGGAGATTAAGGAGGCTTCGTTAGCTGTGACCTTGACTCTGCTCCTGAACGGAGTTTTCACCAATGCTGTAAAGCTCACTGTGGGAAGgCCACGTCCAGATTTCTTCTACCGCTGCTTTCCAGATGGTCAGATGAACCCAGAGTTTCAGTGCAGCGGCGACCCAGAAATGGTCACGGAGGGGAGGAAGAGTTTCCCCAGCGGACACTCATCGTTTGCATTTGCCGGACTGGGCTTTACGGCACTTTTCATAGCTGGGAAGCTTCACTGTTTCAGTCCAGCTGGTCGGGGAAAAGCATGgcgtctgtgtgtgttcctcacacCTCTACTCTGTGCTGTTTTGATCGCTGTCTCCAGAACTTGTGACTACAAACATCACTGGCAAGATGTGTTAGTGGGATCACTGCTGGGTTTGACCTTCTCGTACCTTTGTTACAGACAACATTATCCATCACTCACCGAGTCCGATTCCCATAAACCCCTGAGGATCAGAGACACAACACCCTCAGCACAGGAACGCAAACAAGCCACTGCAGGATTCCTTTTGCCTCTGTAGGGATGCCAGTAGCACTTAAACTACTCCTGAAATGTGTGATGGACATGTTCTCATGCACAGCCCTTAAGCTAATGCTGccaatatgtgtatatgtgagtgtgagtgcgaGACCTAGGAGTCTCTGTTTCCATTTGGCCTTCTTAAGaacatatatacattaaaaaaaaaagaaagaaagaaatactttGTGTATTGTAGATATTTGGATTTGTATTGGACCATGAACAGCCTGGGGTTTCTGCATCAGGTTTCGAATATCTGTTTGAATATCATGTATGTCTCTCgttcactgtgtttataatGGGGTCTatcaataaaatgtttgtaaagtTTG
>XM_026942474.2
GACTGCTGACGTTCTGAGCTCGTGAAACGTAACGCTCGTGCGAGTTCTGAGCTCGTGAAACGTAACGCTCGTGCGAGTTCTAAAGCTTGGAGATGCCAAAATGCAGCGCACCCGCGACTAATGACGTCATGATTGCGTGGCATGGAACATTTGTGCGAGTTCTGATGTTCTGACTGCGTGACATGGAACTCGTGAAGCAAGCGACTGGGACACACCAGATCCAAAGATGAGGAAGAGTATAGACCAGGAGTTCATCGCTGAAGTGGTCATCcgcctgctgctgctggctgTCTTTTTAGTGACTGAGCAACTGGCTCCGTTTACCCGACAGATCCAGCCTGAGGAAATCTGGCTTTACAGGTTCCACCATGTGAAGAATGACCACATTCCTACCTCACTCATGTTTAGCATTGCTCTCTTTACACCACTGGCCACCATTCTGTTTTTTGCATTCCTGAGAAGAACTGAAAAAGGGGAGATTAAGGAGGCTTCGTTAGCTGTGACCTTGACTCTGCTCCTGAACGGAGTTTTCACCAATGCTGTAAAGCTCACTGTGGGAAGgCCACGTCCAGATTTCTTCTACCGCTGCTTTCCAGATGGTCAGATGAACCCAGAGTTTCAGTGCAGCGGCGACCCAGAAATGGTCACGGAGGGGAGGAAGAGTTTCCCCAGCGGACACTCATCGTTTGCATTTGCCGGACTGGGCTTTACGGCACTTTTCATAGCTGGGAAGCTTCACTGTTTCAGTCCAGCTGGTCGGGGAAAAGCATGgcgtctgtgtgtgttcctcacacCTCTACTCTGTGCTGTTTTGATCGCTGTCTCCAGAACTTGTGACTACAAACATCACTGGCAAGATGTGTTAGTGGGATCACTGCTGGGTTTGACCTTCTCGTACCTTTGTTACAGACAACATTATCCATCACTCACCGAGTCCGATTCCCATAAACCCCTGAGGATCAGAGACACAACACCCTCAGCACAGGAACGCAAACAAGCCACTGCAGGATTCCTTTTGCCTCTGTAGGGATGCCAGTAGCACTTAAACTACTCCTGAAATGTGTGATGGACATGTTCTCATGCACAGCCCTTAAGCTAATGCTGccaatatgtgtatatgtgagtgtgagtgcgaGACCTAGGAGTCTCTGTTTCCATTTGGCCTTCTTAAGaacatatatacattaaaaaaaaaagaaagaaagaaatactttGTGTATTGTAGATATTTGGATTTGTATTGGACCATGAACAGCCTGGGGTTTCTGCATCAGGTTTCGAATATCTGTTTGAATATCATGTATGTCTCTCgttcactgtgtttataatGGGGTCTatcaataaaatgtttgtaaagtTTG
>XM_034312684.1
TTCTCAGTGTATGAAATGGAACACTCGTGTGAAGCAAGCGACTGGGACACACCAGATCCAAAGATGAGGAAGAGTATAGACCAGGAGTTCATCGCTGAAGTGGTCATCcgcctgctgctgctggctgTCTTTTTAGTGACTGAGCAACTGGCTCCGTTTACCCGACAGATCCAGCCTGAGGAAATCTGGCTTTACAGGTTCCACCATGTGAAGAATGACCACATTCCTACCTCACTCATGTTTAGCATTGCTCTCTTTACACCACTGGCCACCATTCTGTTTTTTGCATTCCTGAGAAGAACTGAAAAAGGGGAGATTAAGGAGGCTTCGTTAGCTGTGACCTTGACTCTGCTCCTGAACGGAGTTTTCACCAATGCTGTAAAGCTCACTGTGGGAAGgCCACGTCCAGATTTCTTCTACCGCTGCTTTCCAGATGGTCAGATGAACCCAGAGTTTCAGTGCAGCGGCGACCCAGAAATGGTCACGGAGGGGAGGAAGAGTTTCCCCAGCGGACACTCATCGTTTGCATTTGCCGGACTGGGCTTTACGGCACTTTTCATAGCTGGGAAGCTTCACTGTTTCAGTCCAGCTGGTCGGGGAAAAGCATGgcgtctgtgtgtgttcctcacacCTCTACTCTGTGCTGTTTTGATCGCTGTCTCCAGAACTTGTGACTACAAACATCACTGGCAAGATGTGTTAGTGGGATCACTGCTGGGTTTGACCTTCTCGTACCTTTGTTACAGACAACATTATCCATCACTCACCGAGTCCGATTCCCATAAACCCCTGAGGATCAGAGACACAACACCCTCAGCACAGGAACGCAAACAAGCCACTGCAGGATTCCTTTTGCCTCTGTAGGGATGCCAGTAGCACTTAAACTACTCCTGAAATGTGTGATGGACATGTTCTCATGCACAGCCCTTAAGCTAATGCTGccaatatgtgtatatgtgagtgtgagtgcgaGACCTAGGAGTCTCTGTTTCCATTTGGCCTTCTTAAGaacatatatacattaaaaaaaaaagaaagaaagaaatactttGTGTATTGTAGATATTTGGATTTGTATTGGACCATGAACAGCCTGGGGTTTCTGCATCAGGTTTCGAATATCTGTTTGAATATCATGTATGTCTCTCgttcactgtgtttataatGGGGTCTatcaataaaatgtttgtaaagtTTG
>XM_034312685.1
ATTGTGTGACATGGAACGCTTTTGTGACGTTTAGATTGTGTGACATGGAACGCTTGTGTGACGTTTAGATTGTGTGACATGGAACGCTTGTGCGATTTCTGACATTCTGAGtgaatgaaatatttgtGTGAAGCAAGCGACTGGGACACACCAGATCCAAAGATGAGGAAGAGTATAGACCAGGAGTTCATCGCTGAAGTGGTCATCcgcctgctgctgctggctgTCTTTTTAGTGACTGAGCAACTGGCTCCGTTTACCCGACAGATCCAGCCTGAGGAAATCTGGCTTTACAGGTTCCACCATGTGAAGAATGACCACATTCCTACCTCACTCATGTTTAGCATTGCTCTCTTTACACCACTGGCCACCATTCTGTTTTTTGCATTCCTGAGAAGAACTGAAAAAGGGGAGATTAAGGAGGCTTCGTTAGCTGTGACCTTGACTCTGCTCCTGAACGGAGTTTTCACCAATGCTGTAAAGCTCACTGTGGGAAGgCCACGTCCAGATTTCTTCTACCGCTGCTTTCCAGATGGTCAGATGAACCCAGAGTTTCAGTGCAGCGGCGACCCAGAAATGGTCACGGAGGGGAGGAAGAGTTTCCCCAGCGGACACTCATCGTTTGCATTTGCCGGACTGGGCTTTACGGCACTTTTCATAGCTGGGAAGCTTCACTGTTTCAGTCCAGCTGGTCGGGGAAAAGCATGgcgtctgtgtgtgttcctcacacCTCTACTCTGTGCTGTTTTGATCGCTGTCTCCAGAACTTGTGACTACAAACATCACTGGCAAGATGTGTTAGTGGGATCACTGCTGGGTTTGACCTTCTCGTACCTTTGTTACAGACAACATTATCCATCACTCACCGAGTCCGATTCCCATAAACCCCTGAGGATCAGAGACACAACACCCTCAGCACAGGAACGCAAACAAGCCACTGCAGGATTCCTTTTGCCTCTGTAGGGATGCCAGTAGCACTTAAACTACTCCTGAAATGTGTGATGGACATGTTCTCATGCACAGCCCTTAAGCTAATGCTGccaatatgtgtatatgtgagtgtgagtgcgaGACCTAGGAGTCTCTGTTTCCATTTGGCCTTCTTAAGaacatatatacattaaaaaaaaaagaaagaaagaaatactttGTGTATTGTAGATATTTGGATTTGTATTGGACCATGAACAGCCTGGGGTTTCTGCATCAGGTTTCGAATATCTGTTTGAATATCATGTATGTCTCTCgttcactgtgtttataatGGGGTCTatcaataaaatgtttgtaaagtTTG

Function

symbol description
plpp5 Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation. Predicted to act upstream of or within phospholipid metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PLPP5 (phospholipid phosphatase 5).

NR:

description
phospholipid phosphatase 5-like isoform X1

GO: NA

KEGG:

id description
K18693 DPP1, DPPL, PLPP4_5; diacylglycerol diphosphate phosphatase / phosphatidate phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942471.2 False 1366 mRNA 0.47 8 18900743 18906189
XM_026942472.2 True 1405 mRNA 0.48 8 18900339 18906189
XM_026942474.2 False 1361 mRNA 0.47 8 18900744 18906189
XM_034312684.1 False 1198 mRNA 0.46 8 18900978 18906189
XM_034312685.1 False 1297 mRNA 0.46 8 18901124 18906189

Neighbor

gene id symbol gene type direction distance location
nsd3 whsc1l1,LOC107687514,LOC107720716 coding upstream 2532 18867607 ~ 18897807 (+)
ggt5b LOC108277204 coding upstream 112752 18760163 ~ 18787587 (+)
setd1ba setd1b,setd1ba,LOC108425171,LOC107689149,LOC107658592 coding upstream 242997 18635792 ~ 18657342 (+)
tmem120b t120b,tmem120b,LOC107689172,LOC107658534,LOC103032067,LOC107758658 coding upstream 282837 18608968 ~ 18617502 (+)
orai1b orai1b,LOC108276842,LOC108425168,LOC107746203,LOC107758661,LOC107602056,LOC107689140 coding upstream 299369 18596622 ~ 18600970 (+)
trnas-cga_2 NA coding downstream 28695 18934884 ~ 18934965 (+)
trnas-uga_6 NA coding downstream 28943 18935132 ~ 18935213 (+)
trnas-uga_7 NA coding downstream 29408 18935597 ~ 18935678 (+)
trnas-uga_8 NA coding downstream 29718 18935907 ~ 18935988 (+)
trnas-uga_9 NA coding downstream 30700 18936889 ~ 18936970 (+)
LOC117599343 NA non-coding upstream 473149 18426072 ~ 18427190 (+)
G271340 NA non-coding upstream 551955 18298122 ~ 18348384 (+)
G271235 NA non-coding upstream 774547 18124822 ~ 18125792 (+)
G271104 NA non-coding upstream 1126959 17769769 ~ 17773380 (+)
G271102 NA non-coding upstream 1135810 17759550 ~ 17764529 (+)
G271542 NA non-coding downstream 7068 18913257 ~ 18913627 (+)
G271544 NA non-coding downstream 11820 18918009 ~ 18918576 (+)
G271545 NA non-coding downstream 12405 18918594 ~ 18919467 (+)
G271548 NA non-coding downstream 17175 18923364 ~ 18923583 (+)
G271550 NA non-coding downstream 17626 18923815 ~ 18924071 (+)
G271406 NA other upstream 492841 18404269 ~ 18407498 (+)
si:ch73-234b20.5 LOC108276836,LOC108440734 other upstream 1799270 17099096 ~ 17101069 (+)
trnam-cau_42 NA other upstream 1810961 17089307 ~ 17089378 (+)
trnar-ccu_13 NA other upstream 1811040 17089227 ~ 17089299 (+)
trnam-cau_41 NA other upstream 1811739 17088529 ~ 17088600 (+)
G271863 NA other downstream 335520 19241709 ~ 19243905 (+)
LOC113544086 LOC108261382,LOC108276944,LOC108262018 other downstream 469903 19376092 ~ 19414627 (+)
LOC113544004 LOC108276941 other downstream 583017 19489206 ~ 19520777 (+)
LOC113543969 NA other downstream 876238 19782427 ~ 19786831 (+)
G272180 NA other downstream 887723 19793912 ~ 19825232 (+)

Expression


Co-expression Network