mpx (LOC100335032)


Basic Information

Item Value
gene id mpx
gene name LOC100335032
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 20608815 ~ 20623941 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942697.2
CCACTAGTGTGATGGAGATGTGCCTCTCTGCATATAAAGGCCCTCTGCACTTCCACAATCCAACTCATCTCAGAAGCAAAGAGGCAAAACACACAGATTAGGAGAAGACAAAATTAATGACATTGCTCTGAACTGTGGTGTGTGCATCTGTGCTTCAGACATGAATCTCTTAACATCTGTAATGGTGCTGGGACTGTGTTACACACTCAGCTACCCGGCTGTATCAGGATCAGAAGAGAATGGTTTGAGAAGGTCTTTAATTCTGGAGGCCATCAAGGAAGCCAAACAACTCGTAGATGACTCTTATTTGTACTCTCGTCAAAAGAGCCTTGAGAGGGTGCGCAGGTCCGATTTCATCAAGCCGTCTGATATACTGCGTCTGATGAAGCAGCCGAAACGGAAAGCTCGTGAAGCTGTGAGAGCTGCAGATTATCTGGAGCAGACGCTGAGGATCATCgcagagaaaacacaccatgcacacaagAGATCTATTAACGCCACAGCACTGCTCACTCATGAAGAACTCCAGACAATCGAGCGTCTGACAGGCTGTGCCGGTCAAACCCTGCCACCTCCGTGCAGAACGATGCCAGATCTTAACAGATATCGCACGGCCACCAGCGTCTGCAACAACAACATAAATCCACTTCGAGGTGCTTCAAACACACCGTTCACCCGCTGGCTGCCTCCTGTTTATGAAGATAAGATCTCCCAACCTCAAGGATGGAATCCAGAAAGACTCTATAATGGTGTTGTGCTGCCGCTGGTGAGGCTGGTGTCAAACcgcattttcagcacacagGACCAGAATGTTGTGGGAGACAGAGAGTACACACTCCTCATCACCTTCTTCGGCCAGTGGAATGACCACGACCTGTCCTTCACTCCCATGTCACCCAGCATCCGGTCCTTTAGCAACGGCATTGACTGTGATGCGAGCTGCGAGCGCTCCGAGCCATGCTTCCCCATCCAgATTCCTCGAGATGACCCACGCCTGCCCTCAGGTCCCAACAGCTGCCTTCCTGTTTTTCGCTCTGCACCTGCCTGCGGCTCTGGAAACGGCGCGTACATGTTTGGAGGTGTGCCGCGGGTGCGGGAGCAGATCAACACTCTGACAGCATTCCTGGATGCAGGCCAGTTGTATGGCTCTGAGGAGGGGCTCGCTCGAGAACTCCGCGACCTCTCCAACGATGGGGGCCTCATGCGTATCAATGACAGATTTCGGGACAATGGCCGTGAGCTGCTGCCCTTCACCAAGGTGGCCAGCAAAATGTGTGCCACACGCAATCGCATTCTGAACACCACAGGCCTGGAGGAAGTGCCATGTTTTATCGCAGGTGATGAGCGTGTGGATGAGAACATCGCTCTCACTTCGCTGCACACACTCTTCCTGAGAGAACACAACCGGATCGCGCGTGCTCTGCGCCGCATGAACCCACAATGGAGCAGTGAACAGCTTTATCAGGAAGCGCGCAAAATCGTGGGAGCCTTCCATCAgATCATAGTGTTTAGGGATTATCTGCCACACATCGTGGGAACAGATGCTATGAGGAATCAACTAGGCAAGTATCCCGGCTACAACCCCAACGTTGATCCGACCATCTCCAATGTGTTCGCCACCGCCGCTTACCGCTTCGCCCACGCCACCATCCAGCCCCTCATCTTCCGTCTGGATGAAAACTTCCAGGAAAATCGACAGTTCCCCAGCGTTCCTCTGCACACAGCCTTCTTTACCCCATGGAGAATTGTTTTTGAAGGTGGGATTGATCCTCAGATTCGGGGGCTGATTAGTCGTCCAGCTAAGCTGAACAAGCAGGATGGAATACTGGTGAACgcagtgagagaaagactgtTCGCCTTCACCAGCAAAATAGCCCAGGACCTGGGTTCCCTCAACCTGCAGAGGGGCCGAGATCACGGGCtgccagGCTACAACGCATGGCGGAAGTTTTGCGGCTTGTCCACACCCAGGAATGTTATTGAATTGGGGAGAGTGCTGAATAACGCAGATCTGGCACGTAAACTCATCCAACTCTACGGCTCTCCCAATAACATCGATCTTTGGGCAGGAGGCATTGCTGAACCGTTCGTCCCCGGAGGCCGAGTCGGGCCGGTGTTCTCCTGTATCATTGCCACCCAGTTCCAGAAGATCCGCCAAGGAGACAGGCTCTGGTGGGAGAACATGGGTGTTTTCACCCCAGCACAGAAAGCCTCGCTGTCCAGAGTGTCTCTATCTCGCATCATCTGTGACAACACGGGCATTACTAGAGTTCCTAGGAACCCTTTCCTCTTTAGTAGCAACCAAGCAAACTTTATCAACTGCAGAGGCATCCAGGAGGTTGACCTCAATCCTTGGAGGAATGCAGATTTTTCAAGACCCAGAGGACCTCTAGGAGAACCAGGGGCCAGTGTAAATGCAACTGATGAAAATGAGGTTCTAAGCGAAAGCCAATCCAATGAGATCCAGGACCTAGAGGACCTGCTGGAGAACCAGGTAAACCAGGAATGAGAACCCCCAGGGGTCCATGTTGAACCCCCTGCCCCTCTGGAACCCCTTGTCTCCCCTGGACCCTCTGGTTCTTGTGGCATCCTGGATGTCAATGGTTCTCCTGGCCTTTTTCTCCCTGCCATCGCTTCTGCAAGATCATCTACAAAGATATGAACCTCTGCAACACTCAGAAGGGCGAGTTCATCTGCAGCGTACCTGGTGTCTATGAGTTTAATTTCTTCTGCTCGATGTCTGCAGTGTCAGCACCATTACCATGCAGCATAACGGCAGCATAATGGTTTTGAGCAGCCCTAGCACAATGATATACTGCTCCTGAGGATGGAGCAGAGTGAGAGCATGTGGCTAGAGGCCAGTTTATGCACTGACCTTTTAATCTGATAGCTAATTTATTGGCTGCTTGCCCTTCGAATGCCTCCATTTAACACTCAATTTCTGTTACGTAGCAAACTTCTGTTCAAACTGTACAATTTTACTACTCAGCATATCTTTGTATCAATTATCATGAGTAACAATAATGATGGAACAGGATCAAATACATCCAGAGTTGATCCATATACACAAGTAGACACTCAAGGATTGCTTTTCACTGTTCATACACTGTTCACAAGTACATCCTACTTCCTTTCTGTCCTCCCAAGTGCACTGTTTGCTGCTTATGTTATAAATGAACGGCTAAATTTGTATTTTGCTAATGTggtgaaaaatgtttaaagcttCTTTCTAAAGATAATGGCTTTTGATCACTCTGTTGAGAAAACTTTTTAATACAATGGTTTGCAGAAAATCCCATTGATtacattattttgtaaaatatcacAGTTCAGTTCAAGAGGAGAAATCATACCAAATTCAGTTAGGAAAAAAGTGAGCCTGGCTGTCCAAGATAATGGCCTTCATAATGTAAAAGCTAAATACTAacatttgttcatgtttatagatgacagTAAGTCACGccgtgtcctaaaccacatcagtgtctgtctgtgtaacaTCACTGAAGACCTGAATGAGATTTGGCACTCATATTTACGTCTTACCTAATTTCGTAAATATAGGAATGATATGTTTTCAGCATTCCAGTCTGATCAGTGCTATAGATTAtcgtgcatttttttttttacatatattgcatatttttcattatatatacacattctATTTGGTGTCTTTACATGTCTTTTAAGAGTTGTGTGTTgcattaacaatttattttgtgttacatACCAGTTGCAAATAAATTGATGTACCTCATCTGTACAATGATATTGTGTAATGTAATagttaaaataaactaaacatcTGGCATactt

Function

NR:

description
PREDICTED: eosinophil peroxidase-like

GO:

id name namespace
GO:0006979 response to oxidative stress biological_process
GO:0009617 response to bacterium biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0010310 regulation of hydrogen peroxide metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004601 peroxidase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K10788 EPX, EPO; eosinophil peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942697.2 True 3819 mRNA 0.47 17 20608815 20623941

Neighbor

gene id symbol gene type direction distance location
sftpba LOC108276523 coding upstream 266432 20330486 ~ 20342383 (+)
hvcn1 hvcn1 coding upstream 295558 20303730 ~ 20313257 (+)
mtrex skiv2l2,LOC107571110,LOC107744101,LOC106568406,LOC100380870 coding upstream 394061 20182654 ~ 20214754 (+)
pstpip2 pstpip2,LOC107744171,LOC106568404 coding upstream 454012 20125535 ~ 20154803 (+)
sub1a sub1,sub1a,LOC108276987,LOC107686443,LOC107562553,LOC107571117 coding upstream 485106 20117525 ~ 20123709 (+)
loxa lox,LOC108277371,LOC107562574 coding downstream 23866 20647807 ~ 20661095 (+)
snx24 snx24 coding downstream 39162 20663103 ~ 20670487 (+)
gmcl1 gmcl1,LOC107688092,LOC106564898 coding downstream 61031 20684972 ~ 20697663 (+)
pcyox1 pcyox1 coding downstream 78574 20702515 ~ 20711026 (+)
stard7 stard7,LOC107713384,LOC107687872 coding downstream 126232 20750173 ~ 20761668 (+)
G272426 NA non-coding upstream 44751 20562176 ~ 20564064 (+)
G272361 NA non-coding upstream 143769 20409723 ~ 20465046 (+)
G272360 NA non-coding upstream 161137 20442699 ~ 20447678 (+)
G272347 NA non-coding upstream 298939 20309591 ~ 20309876 (+)
G272305 NA non-coding upstream 368469 20239894 ~ 20240346 (+)
G272448 NA non-coding downstream 35662 20659603 ~ 20725194 (+)
G272450 NA non-coding downstream 92570 20716511 ~ 20737500 (+)
G272470 NA non-coding downstream 125420 20749361 ~ 20749647 (+)
G272770 NA non-coding downstream 303681 20927622 ~ 20931583 (+)
G272803 NA non-coding downstream 366402 20990343 ~ 20990551 (+)
G272408 NA other upstream 65861 20540325 ~ 20542954 (+)
G272374 NA other upstream 179672 20423399 ~ 20429143 (+)
G272367 LOC108276637 other upstream 209868 20398280 ~ 20398947 (+)
gfra2b gfra2 other upstream 665310 19853554 ~ 19943505 (+)
trnae-cuc_36 NA other upstream 759989 19848755 ~ 19848826 (+)
LOC113544125 LOC100304632 other downstream 735578 21359519 ~ 21361744 (+)
LOC113543995 NA other downstream 852146 21476087 ~ 21478880 (+)
LOC113544129 LOC108276555,LOC108427250,LOC107687808,LOC107720650,LOC107744134,LOC107678044,LOC563710,LOC107560524 other downstream 1298610 21922551 ~ 22033997 (+)
tmem230a tmem230,tmem230a,LOC103035677,LOC105888828,LOC106565272 other downstream 1745315 22369256 ~ 22374875 (+)
lrrtm4l1 lrrtm4l1,LOC108276585,LOC108433509,LOC107730422,LOC107553720 other downstream 1998487 22622428 ~ 22665570 (+)

Expression


Co-expression Network