elovl7b (LOC108277391,LOC108425137,LOC107588931,LOC107706775,LOC107704168,LOC106571348)


Basic Information

Item Value
gene id elovl7b
gene name LOC108277391,LOC108425137,LOC107588931,LOC107706775,LOC107704168,LOC106571348
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 6444254 ~ 6447190 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943617.2
GCCTTGGCACAGGTGAGCCAGTATTTAGAGCAGGTGCTTCTCTTCTGTGAGTCAGTACTCATCAACTCCACTTAGCGAGAGGACGCAGGACCGTGGAATTAAAGGTCACACGGGATCAGGGAAAAAGCCGGCAAGGAGCAAGTGAGCATCATTAGAGGATGGCGTTCAACAAACTGACCTCAAGTGCTGCCTTGCTTTATGATAAGTGGCTTAAAGAAGCTGACCCAAGAGTTGAGGACTGGCCCCTTATGTCCTCCCCGTTCCCGCAAACCTTGATCATCCTTTCCTACATCTACTTTGTCACGACACTCGGACCTCGTCTGATGGAGAACCGCAAACCTTTTGACCTCAAGCAACCTATGATCATCTACAACTTTAGCATAGTCGGATTCTCGCTTTACATGATTTATGAGTTTCTCATGTCTGGCTGGGCCAATGGATACTCATACCGGTGTGACCTTGTGGACTATTCCAGCTCACCACTGGCTCTCAggATGGCATGGACTTGCTGGCTGTACTACTTCTCCAAGTTCATCGAGATGTTGGATACTGTTTTCTTTGTGCTGAGGAAAAAGAACAGCCAAGTCACTTTCCTCCATGTGTACCATCACTCAATCATGCCCTTCACATGGTGGTTTGGAGTCAAGTTTGCTCCAGGTGGTCTGGGAACCTTCCATGCCCTGCTGAACTGCTGTGTCCATGTGGTCATGTACACCTACTATGCTCTGTCTGCTATGGGCCCAGCCTATCAGAAGTACCTCTGGTGGAAGAAGTACATGACCACCATTCAGCTGGTTCAGTTTGTGATGGTGACCGTCCACATCGGCCAGGTTTTCTTCATGAAGGACTGCCATTACCAGTTCCCAGTATTCCTCTACGTCATTGGCTTGTATGGACTGATATTCCTGGTTCTTTTCCTCAATTTTTACTACCATGCATACACCAAGGGCAAGAGGTTGCCCAAAGTCCTTCAGAATGGAACACGCTTCCTAAACCGTGCATGCAAGAAGACTGAATAAGGACTTTGTACTCCATCGTCACCCATAAGTGAAGATCCTGTAGCttttaaatttgctttattttcctttaaccaTTTCAGAAACTTCACCCACTGTGTTTTATGTTAAAACTTTGTGGAATTCCACTTTCTCACTGAATGAATATTGTCCAACTAGCACATGTGGTTTTACACTGAAAATGTGGATCCAGGTTTGTCTTCACTCGGGTTCTGAAATGTGTATGGGgtacaatataataattattattttttaatatacccttcatttctacattttaagcCCAGCTTTGGAATATGACCTAACTGCTGCTTTAACTGAATACATGGATTGTGAGAGCGGCGGTACTTCTTTTTAATGCTATTGGTCTTTGAAAGGGCAGTGAAGGGTTTGCTTATTACTTTGTAGGTTCATTAAGCAAATCTTGGACCCTTTCCCAATGAAGAGTATGAAGAACTACGCTCGAGTCCTAGGTTGAATGTGGCAAAAGTGACAGCTGGTGTTCATTTTGTGAGTTTTGAGctttgtaaaattttattttcagtgtttactgtTAACTTTCTtaatatggatttgtttttcctttaaaaaaaaaaaaagtctgactgAGGCATTGGTGTTCTTCAAA

Function

NR:

description
PREDICTED: elongation of very long chain fatty acids protein 7-like

GO: NA

KEGG:

id description
K10250 ELOVL7; elongation of very long chain fatty acids protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943617.2 True 1644 mRNA 0.43 8 6444254 6447190

Neighbor

gene id symbol gene type direction distance location
LOC113544768 pitpnm2,LOC107554528,LOC107722332,LOC107654556 coding upstream 191223 6197279 ~ 6253031 (+)
LOC113544858 cdk2ap1,LOC108425184,LOC105026112,LOC103046776,LOC102226456,LOC107722329 coding upstream 275290 6165896 ~ 6168964 (+)
sbno1 sbno1 coding upstream 279302 6148993 ~ 6164952 (+)
rilpl1 rilpl1,LOC108410543,LOC106562515,LOC107655265,LOC107704174 coding upstream 314612 6116153 ~ 6129642 (+)
LOC113544842 LOC108276719,LOC108410541,LOC107722326 coding upstream 328862 6099069 ~ 6115392 (+)
depdc1b depdc1b,LOC107654254,LOC107704111,LOC107709206,LOC107602227 coding downstream 269 6447459 ~ 6458962 (+)
LOC113544721 pde4d,LOC108276982,LOC108425192,LOC107704165,LOC107709115,LOC107653658,LOC108443004,LOC102789696 coding downstream 22760 6469950 ~ 6651852 (+)
LOC113544738 LOC108277217,LOC108425195 coding downstream 240277 6687467 ~ 6695669 (+)
plk2a LOC108277216,LOC108425197,LOC107653495,LOC107602251,LOC107709193,LOC107588929,LOC107706772 coding downstream 250484 6697674 ~ 6701821 (+)
tmed2 tmed2,LOC108425203 coding downstream 661317 7108507 ~ 7113994 (+)
LOC117599393 NA non-coding upstream 2377 6439897 ~ 6441877 (+)
G264428 NA non-coding upstream 160324 6218509 ~ 6283930 (+)
G264427 NA non-coding upstream 235243 6207990 ~ 6209011 (+)
G264426 NA non-coding upstream 249112 6194928 ~ 6195142 (+)
G264424 NA non-coding upstream 269562 6174314 ~ 6174692 (+)
G264835 NA non-coding downstream 254647 6701837 ~ 6702362 (+)
G264903 NA non-coding downstream 484688 6931878 ~ 6947742 (+)
G264894 NA non-coding downstream 515395 6962585 ~ 6962918 (+)
G264933 NA non-coding downstream 603867 7051057 ~ 7051362 (+)
G264934 NA non-coding downstream 604314 7051504 ~ 7051940 (+)
LOC113544903 mphosph9 other upstream 249573 6169893 ~ 6194681 (+)
G264336 NA other upstream 432352 6008800 ~ 6011902 (+)
triap1 triap1,LOC106568193 other upstream 1363611 5077853 ~ 5080643 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 2868117 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 3302501 3116169 ~ 3141753 (+)
G264948 NA other downstream 619681 7066871 ~ 7082441 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 668861 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 1728324 8175514 ~ 8187611 (+)
LOC113544929 NA other downstream 1882515 8329705 ~ 8353841 (+)
G265696 NA other downstream 2186445 8633635 ~ 8639728 (+)

Expression


Co-expression Network