plk2a (LOC108277216,LOC108425197,LOC107653495,LOC107602251,LOC107709193,LOC107588929,LOC107706772)


Basic Information

Item Value
gene id plk2a
gene name LOC108277216,LOC108425197,LOC107653495,LOC107602251,LOC107709193,LOC107588929,LOC107706772
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 6697674 ~ 6701821 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943947.1
ATGGACATTCTCAGGACTATCGCTCATCAACCTGTAAGCAACAACAAAATGTGCGAGCACACACATAACAAACCGACTGAGACGAGACGTGGGAAGCTGGAGGACAGCGCGCACGCGACGCAGGAAATGTCGCGGATCATCTCTGACTCCACGACAGGGAAATGCTACTGCAGAGGAAAAGTTCTCGGCAAGGGTGGCTTTGCCAAATGTTATGAATTTACAGATCTGGGTACAGGCAAAGTGTATGCTGTGAAAATTATTCCACACACGCGGGTCTCCAAACCTCACCAAAGGGAAAAGATCGACAGAGAAATTGAACTGCACAGAGCCCTTCACCACAAACACATCGTCCAATTTTACTACCACTTCGAGGACAAAGACAATATCTACATCCTTCTCGAGCACTGCAGCAGACGATCATTGGCACATATTCTGAAAGCCCGCAAGGTGCTCACAGAACCAGAGGTTAGGTACTACCTAAGACAGATCATCTCAGGACTGAAGTACCTCCATGAACAGGAAATCCTCCACAGAGACCTTAAATTAGGTAACTTCTTCATTAATGAGGCGATGGAACTGAAGATAGGGGACTTTGGCCTGGCAGCTAAGCTAGAACCGGTTGAAAACCGGAGAAGAACAATATGTGGAACCCCAAACTACCTGTCTCCTGAGGTCCTTAACAAGCAAGGCCATGGCTGTGAATCAGATGTTTGGGCTCTTGGCTGTGTCATGTACACAATGCTGTTGGGCAGGCCGCCATTTGAAACCACCAATCTGAAAGAGACGTACCGGTGCATAAGGGAAGCGCGATACACCATGCCTTCTATATTGTCTCCACAGGCCAAGCACCTCATTAGCATCATGCTTGCCAAGAGCCCCGAGGACAGGCCAAGTCTGGATGATATCCTACACCATGACTTCTTCAGCCAGGGTTTCACCCCAGACAGATTGTCTGTCAGCTGCTGTCACACAGCTCCAGACCTCCAGCACACCAGCCCTGCCAAGAGCTTCTTCAAGAAGGCTGCAGCTGCTCTGTTTGGTGGCAAGAAGGATAAAGCCAAGTACTTTGAAACACTAAATAAACTGACAAAAGAGGAAGAGGACATCCACAGACTGCGACATGACCTCAGGAAGGCCTCAATCAGCAATCAGCCTTGCAGGCAAGCTCCTGAGGACAGTAAGCCACCGGTACCATCTACTGGAAAGCCAATCGTCGCTGCCAAGGATGGAGGCAACAAGCAGCAGATCCGTGACTCCATCCGCATGATTGTCCGAGGCACGCTGGgaagctgcagcagcagcagtgaatGCTTGGAAGATAGCACGATGGGTACTGTAGCAGACACTGTTGCCAGAGTACTCCGAGGCTGTCTGGAGAACATGCCAGAAGctAATGACATTTCAAAAGAGAGCCTGAACTGTAGCTTCCAATGGGTGACTAAATGGGTGGACTATTCCAACAAGTATGGCTTTGGTTACCAGCTGTCTGACCACACAGTCGGTGTCCTTTTCAACAACGGCACTCATATGAGCCTGCTGTCTGATAAGAAGACGGTGCATTACTATGCAGAGCTGGGTCAGTGTACAGTCTTCTCCACCAGTGAGGCCCCAGAGCAGTTTGTTGGCCAGGTCACCATCCTCAAATACTTCGCACATTATATGGAAGAGAATCTTATGGATGGTGGTGATTTGCCCAACGTGATTGATATCAGTAAGCCAAGGCTATATCTCCTGCAGTGGCTCAAGTCAGATCGTGCACTCATGATGCTCTTCAATGATGGCACCTTTCAGGTGAACTTCTACCACGACCACACCAAGATCATCTTGTGCAGTCAGAATGAGGAGTACCTGCTGACGTACATCAACGAGGAACGCGTGTCCACCACGCTACGCCTCAGCACACTACTCTGCTGTGGATGCTCCTCGGACCTGCGGAGCCGCATGGAGTACGCCCTCAACATGCTGCTCCAGAGGTGCAACTGAACATCATGAATCTGCAGGCTGAAGACCTTGTTCATGGTTTAGCCACTTTTTTTTGATGGACTTCATGGACCTACATTCACTGGAACTTCTGTTCTGTTGGCCATGAGCCAAATGCCCAATTTACATGATTGTGGCAATGGATTTGAGGTACAAGAACTGGTCCTGTCCACAGGAACTGTTGAATTAGGACTTGCAAAAACGATGGAGAGCTGGGCTGGAACCAGAAAAGACCATTAAATGGACTTGAgttttaaataacatatttgtgtttgctatATAAATATGCAGCAATCTTGTTGCACTGAAGCTTAACAGCGATGTTGGCATTTGTTGTGGACATTGAAGTGGCTTCAGTGGGGCAGGGTGATGTTGTGTAGCTCTGTACAGAGCAGACCACTGTAAAACTGTGAATACATTCCACAACAGGACGGGGCTGCATGGTGAAATATCTTTTAACCAATGCCATAGTTTGTGGGTGGCTCCAACCTCCCACCCTATAATCACTGTTTGGGGAAAGGATAAGGATCCAGGCCATGTCTCTAATGTTGACTGGAAAGATATACACTAGCGCGCCATGGATATAACTTATTTGTCAAAACccggtatttatttatttaataaagacaattttaaaatgaca

Function

NR:

description
PREDICTED: serine/threonine-protein kinase PLK2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08861 PLK2; polo-like kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943947.1 True 2623 mRNA 0.48 14 6697674 6701821

Neighbor

gene id symbol gene type direction distance location
LOC113544738 LOC108277217,LOC108425195 coding upstream 2005 6687467 ~ 6695669 (+)
LOC113544721 pde4d,LOC108276982,LOC108425192,LOC107704165,LOC107709115,LOC107653658,LOC108443004,LOC102789696 coding upstream 45822 6469950 ~ 6651852 (+)
depdc1b depdc1b,LOC107654254,LOC107704111,LOC107709206,LOC107602227 coding upstream 238712 6447459 ~ 6458962 (+)
elovl7b LOC108277391,LOC108425137,LOC107588931,LOC107706775,LOC107704168,LOC106571348 coding upstream 250484 6444254 ~ 6447190 (+)
LOC113544768 pitpnm2,LOC107554528,LOC107722332,LOC107654556 coding upstream 444643 6197279 ~ 6253031 (+)
tmed2 tmed2,LOC108425203 coding downstream 406686 7108507 ~ 7113994 (+)
naa25 naa25 coding downstream 425930 7127751 ~ 7152305 (+)
tor4aa tor4a coding downstream 467427 7169248 ~ 7174553 (+)
slc25a1b slc25a1,slc25a1b,LOC108425209,LOC107704153,LOC107706761 coding downstream 481127 7182948 ~ 7197818 (+)
pi4kaa pi4ka,pi4kaa,LOC108425210,LOC107751806,LOC107704152 coding downstream 497227 7199048 ~ 7243280 (+)
G264475 NA non-coding upstream 244823 6381666 ~ 6452851 (+)
LOC117599393 NA non-coding upstream 255797 6439897 ~ 6441877 (+)
G264428 NA non-coding upstream 413744 6218509 ~ 6283930 (+)
G264427 NA non-coding upstream 488663 6207990 ~ 6209011 (+)
G264426 NA non-coding upstream 502532 6194928 ~ 6195142 (+)
G264835 NA non-coding downstream 16 6701837 ~ 6702362 (+)
G264903 NA non-coding downstream 230057 6931878 ~ 6947742 (+)
G264894 NA non-coding downstream 260764 6962585 ~ 6962918 (+)
G264933 NA non-coding downstream 349236 7051057 ~ 7051362 (+)
G264934 NA non-coding downstream 349683 7051504 ~ 7051940 (+)
LOC113544903 mphosph9 other upstream 502993 6169893 ~ 6194681 (+)
G264336 NA other upstream 685772 6008800 ~ 6011902 (+)
triap1 triap1,LOC106568193 other upstream 1617031 5077853 ~ 5080643 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 3121537 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 3555921 3116169 ~ 3141753 (+)
G264948 NA other downstream 365050 7066871 ~ 7082441 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 414230 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 1473693 8175514 ~ 8187611 (+)
LOC113544929 NA other downstream 1627884 8329705 ~ 8353841 (+)
G265696 NA other downstream 1931814 8633635 ~ 8639728 (+)

Expression


Co-expression Network