pargl


Basic Information

Item Value
gene id pargl
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 5903105 ~ 5911029 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944020.2
TACagcccactgtgtgtgtgtaaaaactaTCAGTATCACTTTCACATTCGTTTTTTCAGCAGCCGTCTCTGTGTCCGGAGCTGACCGACACACAGGACTTCCAAGTCGTGCGGCAGAAAAGTGTTCGCCATATCATCAGCAGGTCAAGAGTTTGAACCCTGAAGGTGCTACAGTCATCCATGGgttcTCTCTGGTTTTGGAGCGTATCCCTGGAACCCTGGGCCTGAGGCGTTTTCTCCATAAACACTAtacatttATGGCTTGTAAAAATGACAGCTCTCAAGTGAAGGCTTGCCTCGATCACTCAGACATGGCCGGGGAAAGCAGAGCAGGAACGAGCCGAGAGACAACGGACAGCTCATCCCCGAAACAAAGGCACAGTCAGTCCTCCGGTAATGAGGCCACCGACTCGAGGCAAAAACCAGGGGCTGAAGCACGGTCAGGAGATACACGGGATGAGGGAAAGCTGAAGAGCAAACCTGAGTGCCACATGCAGCTGGACAAACTGTCTGCAAACAGGCAACACACAGTGCTTATAGATATAAAGGAATTTTATGCTGGCAGAATAGTTCCATATAAGGGAAAGCACGTTTGGGACAGCAAGCATGTGAAATTACCCCAACATTATccaCCGAATGCCATGGAGCCTCGCTGGGCAGTCACAGATAGAGCTCTGAAAAAACTTACGCAAAGGGGTGCTTCAGTAGGAGATGTAGAGGGGGCCATTAAAATGTACAATCCAGCCCACAATAAGGACTGGAGTTTCGAAGCCCTTTACACATATGTAGAGAGATTACCAAAGCTGGAGAACAATTTTTCCCATTTGATCTCAAAAATGGCCAAACTGGCACTGAAACTGCCTGAGCTCATCCAACATCCCATCCCTTTGCTGAGGCAGAACTGCAGCCACACCATAACGATATCCCAGGAGCAAATCTCCTGCCTGCTGGCCAATGCTTTCTTCTGCACCTTTCCCCACAGAAATACACGTCATGCCGGCAGTGAATACGGCAATTTCCCCACCATCAACTTCAGCAGCCTGTTTGCTGTTAGGTCTCCACGGACGTTGGAGAAGCTGAGAGCCCTTTTTCACTACTTCAACACTGTAACCGAAGAAGCCACCAAACCAATTGGACTGGTCACTTTTGAAAGAATTTGCCTTCACCCCTCTAAGTGGCCTGAATGGAATAAGCAGATGGAAAATATGACCAACCTCCGTGTGTATTCGAAAGGCTTGATCGAGAGGGAGGGTCAAGGCATGCTGCAGGTGGATTTTGCCTCCAAGTTTGTGGGTGGAGGAGTGCTCGGGCAAGGACTGGTACAGGAAGAGATTCGCTTCATACAGTGCCCTGAACTGATTGTGGCCAGGCTCTTTACTGAAAAACTGGCTGACAACGAATGCCTGAAGATCACAGGCGCCCAGATGTACAGCAATACGTCCGGCTACAGCGATAACTTTGAGTGGCACAGCCCCCATACAGACAGCACCGAAAGGGATGAATGGAAACGGCGTTACTGTCAGATTGTTGCCATTGATGCTTTGAATTTTGCTGACCCAAGACAGCAGTTCACTGAGAAAAGCATAAAACGAGAGCTCCTCAAGGCGTACGTCGGCTTCAAGGAGGATTCTAACATTCCTTCTGAATACACTCCTGCTGTTGCAACTGGCAACTGGGGATGCGGAGCTTTTAAAGGTGATCCAATGCTCAAAGCTCTTATCCAGATGATGGCTGCAGCTGTGGCTAAGCGAGACTTGGCCTACTTCACCTTTGAAAATAGGAAGCAGGCAGAGGACCTGCAGAGAATGCATGAGTTACTGAAGAGTCAAAAGATGACTGTGGGCAAGTTATACAATCTGCTGCAGGACTACTGTAGGTATtacagtcatcatcatcataaagcAAAGAATGTGTTTGACTACATCAGCGAGAAGATGTGTGTTCGCCCCAGTCAGCTGTGAAAGCCTGCAGTTCTTGGGAAGCAGTACATTAAATCAATACTGTATTTCTCTTAATGTAGAAACTGTAAATGGTGTTCAATTCTGGTGTCAGGGTATACATTTAACCGCAGCAGAAacttaaatgaaaatattgtcTTTGGTGTGAAGCACTTTATAAAACTGTTTTCATGggattttcattacaaaaaaaaaaaatgcagggtagatatttcttttaataagtaatgtcaattttttttggaaattaaaattaaattcctTTAATTGCACCATTGTGCACATACAGTTTATGAAGAGAAGGAATAAAAATCTCAGTGAAACCAAGATGCTTTTATTGAGTGAGGTATTTTAAGAATCCAACAAAcaatattaagaaaataaataaaatttcctTTCA

Function

NR:

description
poly(ADP-ribose) glycohydrolase-like isoform X1

GO: NA

KEGG:

id description
K07759 PARG; poly(ADP-ribose) glycohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944020.2 True 2357 mRNA 0.45 18 5903105 5911029

Neighbor

gene id symbol gene type direction distance location
LOC113544817 LOC108276712 coding upstream 60555 5836657 ~ 5842550 (+)
ccar2 LOC108276708 coding upstream 67580 5828124 ~ 5835525 (+)
ykt6 ykt6,LOC108441080,LOC107704135,LOC107665783,LOC107733284,LOC107751647,LOC107602234 coding upstream 96608 5797141 ~ 5806497 (+)
aebp1 aebp1,LOC108441076,LOC107751625,LOC107665781,LOC107704136 coding upstream 106617 5783968 ~ 5796488 (+)
pnx LOC108276711 coding upstream 121677 5776736 ~ 5781428 (+)
mrps24 mrps24 coding downstream 100962 6011991 ~ 6015837 (+)
polm polm coding downstream 119951 6030980 ~ 6038104 (+)
ved LOC108276657 coding downstream 134211 6045240 ~ 6047205 (+)
LOC113544829 LOC108276728,LOC108410544 coding downstream 148805 6059834 ~ 6080426 (+)
ccdc62 ccdc62 coding downstream 179743 6090772 ~ 6098940 (+)
G264009 LOC108277354 non-coding upstream 176160 5667582 ~ 5726945 (+)
G264002 NA non-coding upstream 198274 5702843 ~ 5704831 (+)
G263993 NA non-coding upstream 329825 5572964 ~ 5573280 (+)
G263953 NA non-coding upstream 697686 5204995 ~ 5205419 (+)
G263801 NA non-coding upstream 877597 5023275 ~ 5025508 (+)
G264056 NA non-coding downstream 11281 5922310 ~ 5926306 (+)
G264424 NA non-coding downstream 263285 6174314 ~ 6174692 (+)
G264426 NA non-coding downstream 283899 6194928 ~ 6195142 (+)
G264427 NA non-coding downstream 296961 6207990 ~ 6209011 (+)
G264428 NA non-coding downstream 307480 6218509 ~ 6283930 (+)
triap1 triap1,LOC106568193 other upstream 822462 5077853 ~ 5080643 (+)
msi2a msi2b,LOC108276910,LOC108435815,LOC108425902 other upstream 2326968 3253316 ~ 3576137 (+)
nrip1b LOC108277259 other upstream 2761352 3116169 ~ 3141753 (+)
pcp4a NA other upstream 3085842 2795491 ~ 2817263 (+)
rps25 rps25,LOC107583381,LOC107565279,LOC108433270,LOC107758587,LOC107679519 other upstream 3155788 2744396 ~ 2747317 (+)
G264336 NA other downstream 97771 6008800 ~ 6011902 (+)
LOC113544903 mphosph9 other downstream 258864 6169893 ~ 6194681 (+)
G264948 NA other downstream 1155842 7066871 ~ 7082441 (+)
ddx55 ddx55,LOC107704124,LOC107665764 other downstream 1205022 7116051 ~ 7126246 (+)
tmem167a tmem167a,LOC107658615,LOC107588977 other downstream 2264485 8175514 ~ 8187611 (+)

Expression


Co-expression Network