LOC117599334


Basic Information

Item Value
gene id LOC117599334
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24872050 ~ 24873662 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034312448.1
ATGCAGAGTGAAGAGGCCATTTCACCTCACAGCGCACCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACACTGCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACACTGCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACAGCCACCTCACACCACACCCCAGCCACCTCCCAGCCACCTCACACCGCACCCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACACCGCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCCCAGCCACCTCACAGCGCACCCCAGCCATCTCACAGCCACCTCACACCGCACCCCAGCCACCTCCCAGCCACCTCCACCGCACCCCCCAGCCACCTCACAGCCACCTCCCACAGCCACCTCACAGCCACCTCACAGCCACCACCTCACACCACACCCCAGCCACCTCACAGCCACCTCCCAGCCACCTCACACACCACCCCCAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACACAACACCCCAGCCACCTCACACCACACCCCAGCCACCTCACACCACACCTCCAGCCACCTCACAGCCACCTCACAGCACCCCAGCCACCTCACAGCCACCTCACACCCCACCCCAGCCACCTCACAGCCACCTCACAGCCACCCCCCAGCCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCACACCAGCCACCTCCCAGCCACCTCACAGCCACCTCACAGCACTCCCAGCCACCTCACAGCCACCTCACACCGCACCCCAGCCACCTCCCAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCCCAGCCACCTCACACTGCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCACACCACACCCCAGCCACCTCACAGCCACCTCACAGCCACCTCCCCCAGCCACCTCACACCGCACCCCAGCCACCTCCCAGCCACCTCCCAGCCACCTCACACCACACCCCAGCCACCCTCACACCGCACCCCAGCCACCTCACACCACACCCCagccacctcacacacaccacctcctcACAGCCACCTCACAGCCACCTCACAGCGCACCCCAGCCACCTCACAGCCACCTCCCAGCCACCTAACAGCCACCTCACACCACACCCCAGCCACCTCACAGCACCCCAGCCACCTCACAGCCACCACCTCACAGCCACCCCCAGCCACCTCACAGCCACCTCACAGCCACCTCACAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCACACCGCACCCCAGCCACCTCACACCGCACCCCAGCCACCTCACAGCCACCTCATACCGCACCCCAGCCACCTCACAGCCACCTCCCAGCCctgcagcttttgttttgtttatgcttattttCGATTTGCCagtctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034312448.1 True 1521 mRNA 0.67 2 24872050 24873662

Neighbor

gene id symbol gene type direction distance location
LOC113525332 LOC108276880 coding downstream 27316 24810803 ~ 24844734 (-)
zgc:86599 zgc:86599,LOC108276884,LOC107718706,LOC107558099,LOC107758606,LOC107602047,LOC107689940 coding downstream 63558 24806422 ~ 24808492 (-)
actr1 actr1,acty,LOC106585571,LOC105889177,LOC106563059,LOC107602067 coding downstream 74320 24793554 ~ 24797730 (-)
pip5k1ba pip5k1b,LOC108428883,LOC107726562,LOC107705047,LOC107667273 coding downstream 94223 24761216 ~ 24777827 (-)
tjp2a NA coding downstream 122599 24733548 ~ 24749451 (-)
G274853 NA non-coding downstream 68569 24799457 ~ 24803481 (-)
G274859 NA non-coding downstream 90375 24780961 ~ 24781675 (-)
G274858 NA non-coding downstream 91664 24780119 ~ 24780386 (-)
G274857 NA non-coding downstream 116668 24755180 ~ 24755382 (-)
G274856 NA non-coding downstream 122196 24749645 ~ 24749854 (-)
LOC113544170 plac8 other downstream 571018 24297476 ~ 24301032 (-)
inip inip,LOC107571239,LOC107658659,LOC107558675 other downstream 618738 24251548 ~ 24253312 (-)
nrarpa nrarp,nrarpa other downstream 1008782 23859305 ~ 23863268 (-)
G274342 slc27a4 other downstream 1069766 23798359 ~ 23802284 (-)
LOC113544130 rusc2 other downstream 3664880 21189969 ~ 21207170 (-)

Expression


Co-expression Network