dgat2 (dgat2,LOC107746984,LOC107691652)


Basic Information

Item Value
gene id dgat2
gene name dgat2,LOC107746984,LOC107691652
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 781523 ~ 794093 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034312867.1
gttcttttctttctcttagaCTTTAATCCTTTATAGATTGATTTTATAGATTTCTCGTGTGGTGTGTATTTTTGAAGAGGTTTATTGATATGAAGTGGCTGTTTTCTGACCCTTTTCTCCGTCGGCTTTCTGCGCGctgagctcagtgtgtgttctggaagTGTTTTCTTGGACTTTCTTACTGACTCTCTTTTCTCTCGCACTGATGCTGATATGCTGATCCACACATCCATCATGGAGCTTAACATTATATCTGTTCACTCTGATTGCTCATAACACAGATGTGTGTTTCCTCAcgcttttctctcttccttctcttttcacaggctgtaaaataaataaatccttctCGGGGAGTGTGAGGACGGAGTGACATGCTGCTGAGGAGCTGAACGGCTTCCATCAGCCGGCtcagtcattttatttaccgTCCTAGCGTTCGTACATCACCTTCAGGATGAAGACTTTACTCGCAGCATACTCGGGGGTTAAaaagggttcaGGTTCTCGGTTCCTCTCGGCTCTACAGGGTTTGCCCTCAGCTCCATGGCTCTCCAGGTCCAAACTGGTGAAGCAGCTGCAGGCCATCTCCGTCCTACAGTTCATCCTCACCTTCCTCGCTATGGGCATTGCTGCCACGGTGCTGCTGCTCTACCTGTTGTGCACAGACTGCTGGGTAATCTCCGCTGTTTACATCGCCTGGCTCATCTTCGACTGGAACACACCTAaacaagGTGGTCGCAGATCGGCGTGGGTGAGGAACTGGACCGTCTGGACGTATTTCAGAGATTATTTTCCGGTCAGAcTCATCAAGACCCATAACTTACCTCCCAACCGTAACTACATCTTCGGTTACCATCCTCACGGCATCTTCTGCTTCGGAGCGTTCTGTAATTTCTCCACAGAGGCGACCGGATTCTCCAAGAAATTCCCGGGGATCAAGCCGTCCCTCGCCACGCTGGCCGGAAACTTCCGCTTGCCCCTGCTGAGGGATTATTTAATGTCTGGAGGTATTTGTCCGGTGAATCGGAACTCCATCGATTATCTCCTGTCTTGTAATGGGACGGGGAACGCCGTGGTCATCGTGGTGGGCGGAGCTGCCGAGTCTCTCGACTGCGCCCCGGGAATGAACTCCGTCACCCTGAGAAACCGGAAAGGCTTCGTCAAACTCGCACTGCAGAaaggagcgGACCTGGTGCCCGTGTACTCGTTCGGGGAGAATGAGGCGTATAAGCAGGTGATATTTGACGAGGGTTCGAGGTGGCGTTGGGTTCAGAGGAAGCTGCAGAAGCTGCTCGGTTTCGCTCCCTGCATCTTCCACGGCTGTGGATTTTTCTCCACCGAGTCGTGGGGCTTCGTCCCGTACGGAAAACCCATCAACACCGTCGTTGGAGAACCAATCACGGTGCCCAAGCTCGAGGATCCGACTCCGGACGTGGTGGAAATGTACCACACCATGTACGTCAACTCTCTCACCACGCTGTTCAATAAGTACAAGACACGCTTCGGCCTGAAAGAGTCCGACGTCCTTCTCAtccactgaagaagaagaagaagaagaagaaggtacTACTGCcttttaaaaacagcaacaaaaccccagtgtttatatttttccatcacacagacacacaccacagcacCGAAACCTGAAGCCGTATAAACGACGATCACGGCTGTGTTCCAATTCTGTCTACTTCCCTTCTGCTTCGCCACTTCCTCTTGGCTGAGTTCCCAATCGCTCAAAACAGTTTttcaagaaaagaaaactttttttgggGGAAGATAAGAATAATAAACTACAGACTCCTCTCCTGTCCTGCCCTTCCAATATCCCATGGCCTTGACTTGCATATtgaaacctgattggctcttatatttgATGATGTAATTAATCTCTCCTTCAGATTTTCCAGCCAAGACGTTTGTTGAGAGAACAGTGAACATTTTCACAGTTTCAGCATCTGCACACTCAAATTTAGGGCCGTTTTTGTGTCTTAATCAGCTCAAGTGGTTATATAAGTGTTATATAAGTGTTATATAAGCGTTATATGAGCGTTAGATGAGTGTTATATAAGCGTTATGAGTGATAGATGAGTGATAGATGAGTGATAGATGAGCAGTAAATGAGTGTTATATCAGCGTTATATGACTGTTATATGAGCGTTAGATGAGCGTTATGAGTGATAGATGAGCATTAGATGAGTGTTTTATAAGCATTATATAAGCGTAACATGAGCGTTAGATGAGTGATAGATGAGCAGTAAATGAGCAGTAAATGAGCGTTAGATGAGCGTTATGAGTGAGCCGTTTTTGTGTCTTAATCAGCTCATGAGGTTATATGAGCATTATATGATAAGTCTTGTGATAGATGTGATAGATGAGTGTTATGAGCGTTAGATGAGTGATAGATGAGCGTTAGATGAGTGTTATATGAGCGTTATATGAGCATTAGATGAGCGTTATATGAGTGTTAGATGAGTGTTATATGAGCGTTATATGAGTGTTATATGAGCGTTATATGAGCGTTAGAGGAGCGTTATATGAGCGTTATATGAGTGTTATATGAGCGTTATATGAGCGT

Function

symbol description
dgat2 Predicted to enable diacylglycerol O-acyltransferase activity. Acts upstream of or within lipid homeostasis; regulation of response to endoplasmic reticulum stress; and response to (R)-carnitine. Predicted to be located in lipid droplet and perinuclear endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in male organism. Human ortholog(s) of this gene implicated in non-alcoholic fatty liver disease. Orthologous to several human genes including DGAT2 (diacylglycerol O-acyltransferase 2).

NR:

description
PREDICTED: diacylglycerol O-acyltransferase 2

GO:

id name namespace
GO:0006071 glycerol metabolic process biological_process
GO:0019432 triglyceride biosynthetic process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004144 diacylglycerol O-acyltransferase activity molecular_function

KEGG:

id description
K11160 DGAT2; diacylglycerol O-acyltransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034312867.1 True 2584 mRNA 0.46 8 781523 794093

Neighbor

gene id symbol gene type direction distance location
mogat2 mogat2,LOC107751377,LOC107579037,LOC107691703 coding upstream 6245 763077 ~ 775278 (+)
umodl1 umodl1 coding upstream 37532 730018 ~ 743991 (+)
atg101 atg101,LOC107751375,LOC107686213,LOC107589731,LOC107691654,LOC107577413 coding upstream 62197 716205 ~ 719326 (+)
rabgef1 rabgef1 coding upstream 145517 623386 ~ 636006 (+)
kctd7 kctd7,LOC106603469 coding upstream 160176 615830 ~ 621347 (+)
uvrag uvrag,LOC108411119,LOC102207598 coding downstream 2746 796839 ~ 865864 (+)
and3 LOC108277318 coding downstream 297986 1092079 ~ 1094333 (+)
trnal-uag_7 NA coding downstream 300758 1094851 ~ 1094932 (+)
trnal-aag_10 NA coding downstream 305279 1099372 ~ 1099453 (+)
pcolcea LOC108277346 coding downstream 325437 1119530 ~ 1128252 (+)
G261190 NA non-coding upstream 8262 771258 ~ 773261 (+)
G261176 NA non-coding upstream 68455 711424 ~ 713068 (+)
G261173 NA non-coding upstream 75241 705543 ~ 706282 (+)
LOC117599335 ppm1e non-coding upstream 97159 657405 ~ 684364 (+)
G261101 NA non-coding upstream 166403 517324 ~ 615120 (+)
G261183 NA non-coding downstream 107 794200 ~ 795370 (+)
G261193 NA non-coding downstream 21294 815387 ~ 815836 (+)
G261199 NA non-coding downstream 61441 855534 ~ 855826 (+)
G261201 NA non-coding downstream 75861 869954 ~ 873772 (+)
G261415 NA non-coding downstream 85584 879677 ~ 941189 (+)
G261178 NA other upstream 53798 725827 ~ 727725 (+)
trim37 trim37,LOC107691657 other upstream 125314 603726 ~ 656209 (+)
bcl7ba bcl7b other upstream 212340 507279 ~ 569183 (+)
prdm15 prdm15,LOC107578663,LOC108413920,LOC106512200,LOC106511912,LOC107728867,LOC107686138 other upstream 281337 482388 ~ 500186 (+)
G261104 NA other upstream 300812 444767 ~ 480711 (+)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other downstream 307696 1101789 ~ 1112278 (+)
G261503 NA other downstream 411898 1205991 ~ 1237132 (+)
ponzr2 LOC108277330 other downstream 617893 1411986 ~ 1419489 (+)
rps25 rps25,LOC107583381,LOC107565279,LOC108433270,LOC107758587,LOC107679519 other downstream 1950303 2744396 ~ 2747317 (+)
pcp4a NA other downstream 2001398 2795491 ~ 2817263 (+)

Expression


Co-expression Network