G299503



Basic Information


Item Value
gene id G299503
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 173753 ~ 178665 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU354902
gctgaacagagtgactttgaacagagtgacgctgaacagagtgacattgaacagagtgatattgaacagagtgacgctgaacagagtgacgctgaacagagtgatattgaacagagtgacgctggacagagtgacgctgaacagagtgacgctgaacagagtgatattgaacagaatAGCATcgaacagagtgacgctgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgacgctgaacagagtaacgctgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacattgaacagagtgatattgaacagagtgacattGAACAGAGTAACGCTGAACAAattgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacgctggatagagtgacgctgaacagagtgatattgaacagagtgacgctggatagagtgatattgaacagagtgacattgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacgctggatagagtgatattgaacagagtgacattgaacagagtaacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgacgctggacagagtgacgctgaacagagtgatattgaacagagtgatattgaacagagtgacgctgaacagaaTAGCATcgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagaatAGCATcgaacagagtgatattgaacagagtgacgctgaacagagtgacgctgaacagagtgatattgaacagaatAGCATCGAACAGAGTGAATAGCATcgaacagagtgacgctgaacagagtgacgctgaacagagtgatattgaacagagtgacgctgaacagagtgatattgaacagaatAGCATCGAACAGAGTGACGATGAACACtaagtgtggtgacccatactcggaatttgtgctctgcatttaacccatccaagtgcgcacacacacacacacacacacacaccgtgaacacacacccggagcagtgggcagccttttttgctgcggcgcccggggagcagttgggggttcggtgccttgctgaagggtctcacacacacacacacacacacttcgctGTAATGTGTTAAACCTGCAAAGCTGCAAATTAATCATGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU354902 True 1390 lncRNA 0.45 2 173753 178665

Neighbor


gene id symbol gene type direction distance location
LOC113525392 stk38,stk38b,LOC105900354,LOC107667630,LOC105016867,LOC108265501 coding downstream 47599 226264 ~ 241666 (+)
pparda ppard,ppardb,LOC108281076 coding downstream 104202 282867 ~ 295160 (+)
wdr77 wdr77 coding downstream 137303 315968 ~ 326307 (+)
zgc:153675 LOC108255011 coding downstream 197897 376562 ~ 380543 (+)
btg2 LOC108255010 coding downstream 227443 406108 ~ 409450 (+)
G299494 NA non-coding upstream 23116 140422 ~ 150637 (+)
G299492 NA non-coding upstream 26196 136884 ~ 147557 (+)
G299473 NA non-coding upstream 52410 120513 ~ 121343 (+)
G299470 NA non-coding upstream 61812 111016 ~ 111941 (+)
G299468 NA non-coding upstream 64674 108823 ~ 109079 (+)
G299486 NA non-coding downstream 25147 203812 ~ 204912 (+)
G299482 NA non-coding downstream 31329 209994 ~ 217409 (+)
G299522 NA non-coding downstream 57411 236076 ~ 236490 (+)
G299528 NA non-coding downstream 73058 251723 ~ 254232 (+)
G299618 NA non-coding downstream 386611 565276 ~ 565508 (+)
dram2b NA other downstream 172923 351588 ~ 360258 (+)
cdkn1a cdkn1a other downstream 336875 515540 ~ 520943 (+)
LOC117599902 NA other downstream 500252 678917 ~ 726922 (+)
mfap2 mfap2 other downstream 579844 758509 ~ 805098 (+)
LOC113539702 LOC108281106 other downstream 664188 842853 ~ 844870 (+)

Expression



Co-expression Network