Gene
RNA
| Item | Value |
|---|---|
| gene id | G299522 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 236076 ~ 236490 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU354922 | True | 245 | lncRNA | 0.49 | 2 | 236076 | 236490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pparda | ppard,ppardb,LOC108281076 | coding | downstream | 46377 | 282867 ~ 295160 (+) |
| wdr77 | wdr77 | coding | downstream | 79478 | 315968 ~ 326307 (+) |
| zgc:153675 | LOC108255011 | coding | downstream | 140072 | 376562 ~ 380543 (+) |
| btg2 | LOC108255010 | coding | downstream | 169618 | 406108 ~ 409450 (+) |
| arl8a | arl8a,LOC107671521,LOC107722853,LOC107569762,LOC107750681 | coding | downstream | 195022 | 431512 ~ 439177 (+) |
| G299482 | NA | non-coding | upstream | 18667 | 209994 ~ 217409 (+) |
| G299486 | NA | non-coding | upstream | 31164 | 203812 ~ 204912 (+) |
| G299503 | NA | non-coding | upstream | 57411 | 173753 ~ 178665 (+) |
| G299494 | NA | non-coding | upstream | 85439 | 140422 ~ 150637 (+) |
| G299492 | NA | non-coding | upstream | 88519 | 136884 ~ 147557 (+) |
| G299528 | NA | non-coding | downstream | 15233 | 251723 ~ 254232 (+) |
| G299618 | NA | non-coding | downstream | 328786 | 565276 ~ 565508 (+) |
| G299625 | NA | non-coding | downstream | 365068 | 601558 ~ 602113 (+) |
| G299679 | NA | non-coding | downstream | 571669 | 808159 ~ 809350 (+) |
| G299708 | NA | non-coding | downstream | 601873 | 838363 ~ 838915 (+) |
| LOC113525237 | LOC108281078 | other | upstream | 46759 | 165615 ~ 189317 (+) |
| dram2b | NA | other | downstream | 115098 | 351588 ~ 360258 (+) |
| cdkn1a | cdkn1a | other | downstream | 279050 | 515540 ~ 520943 (+) |
| LOC117599902 | NA | other | downstream | 442427 | 678917 ~ 726922 (+) |
| mfap2 | mfap2 | other | downstream | 522019 | 758509 ~ 805098 (+) |
| LOC113539702 | LOC108281106 | other | downstream | 606363 | 842853 ~ 844870 (+) |
