Gene
RNA
| Item | Value |
|---|---|
| gene id | G299618 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 565276 ~ 565508 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU355052 | True | 213 | lncRNA | 0.42 | 2 | 565276 | 565508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccnd3 | ccnd3 | coding | upstream | 10564 | 548833 ~ 554712 (+) |
| bysl | bysl | coding | upstream | 17659 | 542037 ~ 547617 (+) |
| tmcc2 | tmcc2,LOC107569750,LOC107690538,LOC107656904,LOC107572364 | coding | upstream | 34798 | 522376 ~ 530478 (+) |
| srsf3b | srsf3,srsf3b,LOC107569752,LOC107690536,LOC107656901 | coding | upstream | 56923 | 503469 ~ 508353 (+) |
| apobec2a | LOC108281085 | coding | upstream | 69639 | 492045 ~ 495637 (+) |
| dstyk | dstyk | coding | downstream | 6080 | 571588 ~ 607621 (+) |
| nbl1 | nbl1,LOC105897883 | coding | downstream | 122443 | 687951 ~ 696115 (+) |
| LOC113539512 | LOC108281094 | coding | downstream | 133518 | 699026 ~ 703360 (+) |
| LOC113539444 | vwa1 | coding | downstream | 160032 | 725540 ~ 740352 (+) |
| fndc10 | fndc10 | coding | downstream | 183141 | 748649 ~ 752616 (+) |
| G299528 | NA | non-coding | upstream | 311044 | 251723 ~ 254232 (+) |
| G299522 | NA | non-coding | upstream | 328786 | 236076 ~ 236490 (+) |
| G299482 | NA | non-coding | upstream | 347867 | 209994 ~ 217409 (+) |
| G299486 | NA | non-coding | upstream | 360364 | 203812 ~ 204912 (+) |
| G299503 | NA | non-coding | upstream | 386611 | 173753 ~ 178665 (+) |
| G299625 | NA | non-coding | downstream | 36050 | 601558 ~ 602113 (+) |
| G299679 | NA | non-coding | downstream | 242651 | 808159 ~ 809350 (+) |
| G299708 | NA | non-coding | downstream | 272855 | 838363 ~ 838915 (+) |
| G299695 | NA | non-coding | downstream | 279960 | 845468 ~ 847722 (+) |
| G299719 | NA | non-coding | downstream | 307727 | 873235 ~ 873473 (+) |
| cdkn1a | cdkn1a | other | upstream | 44333 | 515540 ~ 520943 (+) |
| dram2b | NA | other | upstream | 205018 | 351588 ~ 360258 (+) |
| LOC113525237 | LOC108281078 | other | upstream | 375959 | 165615 ~ 189317 (+) |
| LOC117599902 | NA | other | downstream | 113409 | 678917 ~ 726922 (+) |
| mfap2 | mfap2 | other | downstream | 193001 | 758509 ~ 805098 (+) |
| LOC113539702 | LOC108281106 | other | downstream | 277345 | 842853 ~ 844870 (+) |
| fbxo42 | fbxo42,LOC107719051,LOC107656898 | other | downstream | 297750 | 863258 ~ 872756 (+) |
| erc2 | erc2,LOC107582387,LOC108414413,LOC107694874,LOC107699320 | other | downstream | 882934 | 1448442 ~ 1494645 (+) |
