Gene
RNA
| Item | Value |
|---|---|
| gene id | G299708 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 838363 ~ 838915 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU355170 | True | 553 | lncRNA | 0.47 | 1 | 838363 | 838915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sdhb | sdhb,LOC107656920,LOC105905141,LOC104949017,LOC100705239 | coding | upstream | 45310 | 786355 ~ 793053 (+) |
| tmem240b | tmem240 | coding | upstream | 68408 | 762266 ~ 769955 (+) |
| ssu72 | ssu72,LOC107690546 | coding | upstream | 77146 | 753354 ~ 761217 (+) |
| fndc10 | fndc10 | coding | upstream | 85747 | 748649 ~ 752616 (+) |
| LOC113539444 | vwa1 | coding | upstream | 98011 | 725540 ~ 740352 (+) |
| slc25a34 | slc25a34,LOC102777532 | coding | downstream | 36478 | 875393 ~ 883546 (+) |
| LOC113539452 | NA | coding | downstream | 45800 | 884715 ~ 888350 (+) |
| fblim1 | fblim1,LOC107719030,LOC100709954 | coding | downstream | 49457 | 888372 ~ 902581 (+) |
| si:ch1073-335m2.2 | LOC108254705,LOC107737932 | coding | downstream | 67514 | 906429 ~ 926559 (+) |
| ndufaf3 | ndufaf3 | coding | downstream | 112628 | 951543 ~ 967971 (+) |
| G299679 | NA | non-coding | upstream | 29013 | 808159 ~ 809350 (+) |
| G299625 | NA | non-coding | upstream | 236250 | 601558 ~ 602113 (+) |
| G299618 | NA | non-coding | upstream | 272855 | 565276 ~ 565508 (+) |
| G299528 | NA | non-coding | upstream | 584131 | 251723 ~ 254232 (+) |
| G299522 | NA | non-coding | upstream | 601873 | 236076 ~ 236490 (+) |
| G299695 | NA | non-coding | downstream | 6553 | 845468 ~ 847722 (+) |
| G299719 | NA | non-coding | downstream | 34320 | 873235 ~ 873473 (+) |
| G299659 | nckipsd | non-coding | downstream | 102921 | 941836 ~ 943526 (+) |
| G299734 | NA | non-coding | downstream | 115520 | 954435 ~ 990707 (+) |
| G299735 | NA | non-coding | downstream | 126615 | 965530 ~ 1006953 (+) |
| mfap2 | mfap2 | other | upstream | 33265 | 758509 ~ 805098 (+) |
| LOC117599902 | NA | other | upstream | 111441 | 678917 ~ 726922 (+) |
| cdkn1a | cdkn1a | other | upstream | 317420 | 515540 ~ 520943 (+) |
| dram2b | NA | other | upstream | 478105 | 351588 ~ 360258 (+) |
| LOC113525237 | LOC108281078 | other | upstream | 649046 | 165615 ~ 189317 (+) |
| LOC113539702 | LOC108281106 | other | downstream | 3938 | 842853 ~ 844870 (+) |
| fbxo42 | fbxo42,LOC107719051,LOC107656898 | other | downstream | 24343 | 863258 ~ 872756 (+) |
| erc2 | erc2,LOC107582387,LOC108414413,LOC107694874,LOC107699320 | other | downstream | 609527 | 1448442 ~ 1494645 (+) |
| LOC117599925 | NA | other | downstream | 657945 | 1496860 ~ 1499172 (+) |
| mon1a | mon1a | other | downstream | 1214168 | 2053083 ~ 2060641 (+) |
