btg2 (LOC108255010)


Basic Information

Item Value
gene id btg2
gene name LOC108255010
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 406108 ~ 409450 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912036.2
ATGGCGGACGGAGGAGCTTCAGTTCCttgcagagagacacagaggcacaGGGAGGCACGGAGAGAGAGGCTTTCTGTCACGGAGAAGtgtttcactcactcactgctcTCTTGCTTGAGCTCAGAGGAATGTTAGCGGCGTGAAGCGGATTCGACGTGCTGAAGGAATTCGATGTGTTTTTGGAGAAGAGCCTCAGCAGCAGGTCGCTAACTGCTTCCACAGGAGCTGAAACTCGGCACTCCGGAGACATTTTCTCACTAATCCGCCTGCTGACGGTCTGAAATGAACCCTGGCTGTGCAGCTCGAGCTGAAATGGTGCCTgagattaaagcagcagtgagcTTTCTGGTCAGAATGATCCGGAACAGCGGCTTCCTCCCGGACACACAGCTGCAGGTCTTCAGAGACTGTCTCCAGCAAGCGctctcagATCGCTACAGACACCACTGGTTCCCGGACAGGCCTCAGAAAGGTTCCGGTTACCGCTGCATCCGGATCAACCATGAGATGGACCCTCTGATCGGCGGGGCGGCGAGTCGGGTGGGCCTGAGCGCGGAGCGGCTCTTCTCCCTGCTCCCGCGAGAGCTCACGCTGTGGATCGACCCCTACGAGGTGTCCTACAGGATCGGCGAGGACGGCTCCATCTGCGTCCTGTACGAGGCCGAGCCTCCCGCGTCCGGTCCCGCTTCGTCCTCGCTGTCGCCGTTCGACCCTCTGAGCTGCAAGAACGGCTTCATGATGAGCGGCAGGACGAGTCCTCCTAAACACTACCTCATGACCGTGTCGAGCTGAGCGGACGCCAGGACACGCCGCTGTGCGCAGGACGGGTTAACTTTCCTGAGACTTTCCATTtcttgacatgtttttttttattttttcttctgtttactCTTTAAACCCTTTATTTTTATAGTCTAAAGCACTGCCTCGTGTCCCTGCGACTGGACGCTTCCTCCACTTGCACTGTAGGCGTGTGCCGATACTCGCTCCGTATCCTGCGATACTGGTGTATCGCGATTTTTATGATATCACCATATTGTGTGAAGAAAACATCCTGTAGCTGCAAAGGAGCCTCTGTTGTGTCTCGTTCATTTCGACTCGATCTGCCACAAAGTGCTGCCTACGTAGGGAATCTCTTCCTGTGTGGAATGTAAAGATGCCGACGGTATTCCCGTTATCACGCGCCGAGTGTTTGCGATGTGACTCGTTATATCAGCGAGTTGCGTTATATCACGTATGCGACAGTTCAGGATTCAACCTCAATGGGAAATGCCCGAATATGCTGCCTACCTAGGGCGCCTCCTCAGGGAGGGTGAAAACGATGACTCGTGTCATGTGAGTGATGATCGGCACATGCCTCTCGCACTGATACGCGACCCGTGTGTTAAAtatgtgaaacatggtggtggtagtctTGCACGAACATCAGAGCTCGGGTGCGAGACGGTGCTCAGTAGCGCCATCTCTTATTACTggcattatttttataattattgttattattattattattgcacagAACAGCTGATTAAAGGGTTTCAAATGATTTCTGCTGCCTTAAAAACACTGAACGTTTCTGCCAAACTCGAGTCTTAGTGTGCAATATGAAGTGTGTTCCAAAAAtatctcctccttctcctcctcctcgcGAATGTCATGGAATGAACCTCAGTGGAAAAGTAACCGTGCCCTTCTCGCACTCGTCTTCTgtagcattctctctctctctctctctgggctGTTGAGCAGCTCTGTGTTTACTGGGTTTAGACGGAGAAACTGTAGTTTGTAAGCTATTTGAAGCACCGTATGcttttattgtacttttttttttaaaaggatttgTGCATAATATAGAGAACTGTacagttttgtgatttttgtattGCAATAAAAGTTTATAAATGA

Function

NR:

description
PREDICTED: protein BTG2-like isoform X1

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912036.2 True 1908 mRNA 0.50 2 406108 409450

Neighbor

gene id symbol gene type direction distance location
zgc:153675 LOC108255011 coding upstream 25565 376562 ~ 380543 (+)
wdr77 wdr77 coding upstream 79801 315968 ~ 326307 (+)
pparda ppard,ppardb,LOC108281076 coding upstream 110948 282867 ~ 295160 (+)
LOC113525392 stk38,stk38b,LOC105900354,LOC107667630,LOC105016867,LOC108265501 coding upstream 164442 226264 ~ 241666 (+)
arl8a arl8a,LOC107671521,LOC107722853,LOC107569762,LOC107750681 coding downstream 22062 431512 ~ 439177 (+)
apobec2a LOC108281085 coding downstream 82595 492045 ~ 495637 (+)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536,LOC107656901 coding downstream 94019 503469 ~ 508353 (+)
tmcc2 tmcc2,LOC107569750,LOC107690538,LOC107656904,LOC107572364 coding downstream 112926 522376 ~ 530478 (+)
bysl bysl coding downstream 132587 542037 ~ 547617 (+)
G299528 NA non-coding upstream 151876 251723 ~ 254232 (+)
G299522 NA non-coding upstream 169618 236076 ~ 236490 (+)
G299482 NA non-coding upstream 188699 209994 ~ 217409 (+)
G299486 NA non-coding upstream 201196 203812 ~ 204912 (+)
G299503 NA non-coding upstream 227443 173753 ~ 178665 (+)
G299618 NA non-coding downstream 155826 565276 ~ 565508 (+)
G299625 NA non-coding downstream 192108 601558 ~ 602113 (+)
G299679 NA non-coding downstream 398709 808159 ~ 809350 (+)
G299708 NA non-coding downstream 428913 838363 ~ 838915 (+)
G299695 NA non-coding downstream 436018 845468 ~ 847722 (+)
dram2b NA other upstream 45850 351588 ~ 360258 (+)
LOC113525237 LOC108281078 other upstream 216791 165615 ~ 189317 (+)
cdkn1a cdkn1a other downstream 106090 515540 ~ 520943 (+)
LOC117599902 NA other downstream 269467 678917 ~ 726922 (+)
mfap2 mfap2 other downstream 349059 758509 ~ 805098 (+)
LOC113539702 LOC108281106 other downstream 433403 842853 ~ 844870 (+)
fbxo42 fbxo42,LOC107719051,LOC107656898 other downstream 453808 863258 ~ 872756 (+)

Expression


Co-expression Network