dusp7 (dusp7,LOC107697567,LOC107677944)


Basic Information

Item Value
gene id dusp7
gene name dusp7,LOC107697567,LOC107677944
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 21491890 ~ 21510998 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932832.2
aagagagagagagagagaaagaaaagaaaaaactgagaaGCGGAGAGGAACAGGAACACGGCGCGAGCTTCTTCACTAGAAACGTGTGAAAACACGGCGAGCGCTCGCGCACTGACCGGATGTGCTTTTCTCGCTCATGGAGATTAACGTGAACGCGCTTCGAGCTGGAAAAGTGTAGAGTGATTAGGATTTTCGTGATCTCGCGCGctcggtgtgtgtgagtgtgtgtgtgtgtgtgagtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgagctactTTGTGCTGATTGAACTACTCGGATGCTTTGATCTGTTTGGGAATTTGGTGCGGGTTTGAAGAGCGCGTGCCCGGTGCTGCTGCGCTGCTCAGGGCGCATGTTGATTTTTTATCCCCCGTGATCAGAGTTCGGttccctccacctccacctccatcacacctccacctccaccaccaccccGATGCTCCAGCAGCAGCCCTGATGTGGGGGAAAAGTGCGGCATGGCTGCAGGACGAGCTGGAGTCCGGGCTCAACTCTCTGCTCCTGCTCGACTGCCGCTCTCACGAGCTTTACGAGTCCTCTCACATCGAGTCCGCCATCCACCTCGCCATCCCGGGCCTCATGCTCCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCTCCGTCATCCCCAACGACGCGGACAAGGAGCGCTTCATCCGCCGCTGCAAGAGCGACACCGTGCTGCTGTACGACGAGTGCGGGGAGAGCGGGGCGGCTGCTGCGGGGAGTGCGGGGAGTGCGGGCTCGGTGCTCGCGCTGCTCATGCACAGACTCCGGGAAGACGGCTGTAGGGCCTACTACCTGGAGGgaGGGTTTAATAAGTTTCAGACGGAGTACCCGGAGCACTGCGAGACCAATCTGGACTCGTCGTGTCCGAGCAGCTCTCCTCCCGCCTCGGTTCTGGGTCTGAGTGGATTAAAGATCAGCTCCGACGGCTCGGACGGGGAATCGGACCGCGAGCCGAGCAGCGCCACCGAGTCGGACGGCAGCCCGTTACCTAGCAACCAGCCGGCGTTCCCGGTCCAGATCCTGCCCTATCTGTATTTAGGCTGCGCTAAAGACTCCACCAACCTGGACGTCCTCGGCAAATACAACATCAAGTACATTCTGAACGTGACGCCCAACCTGCCCAACATGTTCGAGCACGACGGAGAATTCAAGTACAAACAGATTCCCATCTCGGATCACTGGAGCCAGAACCTGTCGCAGTTTTTCCCCGAGGCCATCAGCTTCATCGACGAAGCTCGCTCTAAGAAGTGCGGGATCCTGGTGCACTGCCTGGCGGGGATTAGTCGCTCGGTCACGGTGACGGTGGCGTATCTGATGCAGAAACTCAACCTGAGTCTAAACGACGCTTACGACTTCGTCAAGCGCAAAAAATCCAACATCTCGCCCAACTTTAACTTCATGGGGCAGCTGCTGGACTTCGAGCGGACGCTGGGTTTAAACAGCCCGACCTGCGACAACCGATCGCCCAAAGATCAGCTGTTCTTCACCACGCCCACCAATCACAACGTTTTCCAGCTTGATACGCTCGAGTCGACGTGAAAACACGCCACAATGAATGTTTTTGCCTCCGGAAGAAAGTTTAGAAACGCAATTCGGGCAGCGTTGAATCGTAAAAATTGCCCGGAAAACTGATTGTGAAAGCAGAACCACGGAAACACAGTTTTAGCCGTCACGGCAGCTTTTCCCGCCTTTCTGAAATGGactgttctctttttttgttttttaaaaataaagaggaaacaaGAGACCAAATGAAACCAGACGGAAACAACAGAAACTGATTTGTCATCAAGtttttacaacaacaacaaacttcCTGTCCTGATGGGTGCCaatctggaatttttttattttttaatttaattttttttaaaaaaacaggatcTTGAGAAAGAAAACTCGCTCTACGAAATGTAGGGTTTgggattttaaaacaaaaaaaaacaaagacaaacacaaaacaaaattaaaatgccaTACATCTCGACCAACAGCTACAATTTCTAAAAATTCCTGATTGTATCTGACCAACAATAACGGCGTGTCTGTTCATGGGaaattccttgttttttttgttttttttaatcgtttGTTTTGACCTAATGCGCTTTGCACAGAGGAAGCCTTTTACTCTTTTGGCACTTGAAACTggtacacaaataaaaagagaCATTTCGAGGTTGTTAAGCTTGTTAACAAATGGCTCTTAACGAACTTCCTCACTTCCTTCCTAACGAACGTGTTAATTTCTTTACTGACTCACGCTCAGGCCTTGGCTCTCGTTAATATTCAGTATCAGAACCTGACGCATTTGAGCGTGTGCTGCTCGGGTCGAGATCTTTAACCGAAGCGACGTTGCTGGTAAACGAGTGTTTAGGATCGTTTTTTTAACTACTCTTGTCGCTCCTGCGTTAACAGGACGGCAGAAAGTGTGTAGCGAGAGCGTTTCTGCAGGAAGAAACATTCGATCGGAGTCAAAGGGACATGTACGAGTTCGCAGGATTGCTTTAACCGGCCTTATATAAccttttttaattctttcttaTTCTGACTGTTCAGTACTTATTTGTATCTCTCTTTAGAAATCGTCATaaacttattaaaatataagtgttcatttttaaaggaaTCAATATGTAGTAATAATGACAGCTAATGGTCTCTAACGGGTCAGTCGAGGTTGTATTTGTTACTTCTGCAATATTATCCGAACCAACTTTGCAGTATTTTatacagttgaaaaaaaaaaaacgcctcgGGTTTTTAATTCCTCTTTTGTACAAGTATTTCACAATTTCACACTAAAACATACCGCGAATTTCTCAATCCTGCTTCAGAACTGAGGGAGCTTTTCATCCCGAAGTTAAACTtggcatgtgctgataatcgGTTATGTGATATATCACATTATTTaaacgtttttgtttttttttaaatttttttttggatgcaCCAAAATACAGCCACATTCAGACTTCTATCTTTTGGAATCCCATAATTCCGTTCACTGCGAGTTTGAAAACCACAACAGTGGACACGACTGTCGCTCCGACTGAGGAATACGTAACATGAATAATTTAGCGTCTTATAGCTACAGTTTACTGAGTAAAAGTTGTTTGCTTTcattaaaagttattaaattGCACGAGTTACTGTAACACAAAACATGACCACACTTACTAGCATTAATCACCACATTAGCTTGTAATGAGTTCACTTGCTTTTTGCTAACAGtgaaatatcatgatattgtTATTGTAATATTTCACCGAAATATCAGCACATGGCCAGACATCACACATCGCACATCGCACAACACGAATTCATCACATCGTAGTTACTAATAaccgatttatttatttttttgttcagtatACGATTGCACCTGGTTCTGTTTATAAACCCCACAAATCTCAATATTGTGCTCTATGATATTCCTGTGGCCTTTTTTTGATGTATTTGaatatatctaatatatctatatataaatataaatatataaatctatattttatGCAGATATGCAACTGTCTCCTCCTGAATAATTAACGAGGACGACCATTTCTCATGCTTGAAACGACTTTTTATCTGTTAGGAAGTTAACGGCCAATATCAAAAAGGAAAAACGAGGTTGGAGACTCGAGACAGGCCGGAATGggaattttttacttttcattttatttaaaaccgGTGTGATTcctcatacaaaaaaaaaaaacagctcataaacacaactgcattaaaaaatactaatcAGTAATGGATTAGCAGACGTTCCATTGTAAtgatccataataataataataataataataataataataataatgataatgagagATTGATTCTGTGAACTGATTGTAAGTGAAactaaatattatttgaatcccaaaaaaaaaataatcaacaagtcAGAAAAAATAGTCAAGtctagaaataaaaacagctaaacaatgctaaataaaatcacgGAAAACTGTCTGAAGAATGTCAGTAACGTTAAGTGAGTCAGTATTAACACACTCTCAGCTCCTGCTTCCTTTCTGTTCTCAACATTTAGCacaacaatgcaaatttccaaAGGATCATAAAAAACGACTGTTTCTTTTTCCCAGTATTAGCTAAAAATAGCTTTAAATATAAACTAGCATTGTGTATAAACATGCTAACACACTAAATACTATTGTAATACACATGCTTCACCACAAACCTGAAACCTCTAAAATTgtttttagcctgtttactgtactGCTACTTAACTTATACAGCATATAATAAACACGCTAACACATGAACTAGTACTGTATACGTTTAATGTTAAACAATAATTAACATTACAGTGAAAACGCTAACACACCAACTAGCATTGTATAATCGTATATAATGTTTTATCctgtttaatgtaatgttattttgtgGCTAACTCATTAGCCAGCATTGTAGTAGACATGCTAACACCAAAACTAGCACTTAAATAATCGTGAGTTCGCTAGCCTGAGCAGTTTTAAATCGCTCTGTCACTCATTTCTGGTGTAATGTTTggctttaaaaaattacaattctagtgtatttttaaaaagaaaggaaaaagtgaGAATTACACCGGTTTATCGTATATCGCTAACCCCCGCCTCGCCCGACTCGAGTCTTACGCCACCGTAAGGATTGAAACTGATTCCTGTACGAactttgtgtttattgtttaattatttaaatctaaTTCCTTGATTTCAAGCTGCTTCTTTGTGGAGGAATGTTCGTGTCTCTGTAACAGTAAATACTTTTCATCTGTATTTTTGCCAGAAGCATCGCAGAAGCTTCGATTTCTGCGTAAATTTTATTGTAGCTATAAAACGAGGATGAGGCGGTTTTGAGTTTCGCGAGAGGAACAGAAAAACGAGTAAATAACAAACGTGTGTATCTTACCTCACTGAGGACTTTTTCAGGGATTTTTTGACAATGCGTCTGCGTCATGTTACAGCTTCACTATACCTGATGATTAGCTGTTTTATATGTgctgtatacatttttttttaaaagatgcaatctatataatgtgtataaagtGGGCTTGGTAATGGGgaagtttgaatttttttgttctgatttATGAAGGATATGAAATTGTCCATATGTGTTGTATAGTTGTATGGAAACCAACACGAGACATGTTTATACAGCaaataaatattgaattatttttttggttAA

Function

symbol description
dusp7 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in peptidyl-threonine dephosphorylation and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytosol. Is expressed in cranial ganglion and trigeminal placode. Orthologous to human DUSP7 (dual specificity phosphatase 7).

NR:

description
PREDICTED: dual specificity protein phosphatase 7-like

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0005829 cytosol cellular_component
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932832.2 True 5264 mRNA 0.41 3 21491890 21510998

Neighbor

gene id symbol gene type direction distance location
poc1a poc1a,LOC107747840 coding upstream 8557 21443299 ~ 21483333 (+)
alas1 alas1 coding upstream 56066 21410776 ~ 21435824 (+)
lrp1aa LOC108281054,LOC108424569 coding upstream 120220 21211252 ~ 21371670 (+)
faim2b LOC108255062 coding upstream 342606 21137809 ~ 21149284 (+)
LOC113537842 LOC108255161 coding upstream 356756 21113434 ~ 21135134 (+)
rpl29 NA coding downstream 31756 21542754 ~ 21545334 (+)
G311972 NA non-coding upstream 7073 21484539 ~ 21484817 (+)
G311946 NA non-coding upstream 100797 21377860 ~ 21391093 (+)
G311665 NA non-coding upstream 300261 21191168 ~ 21191629 (+)
LOC117599907 NA non-coding upstream 306851 21166980 ~ 21185039 (+)
G311652 NA non-coding upstream 326964 21159457 ~ 21164926 (+)
G311977 NA non-coding downstream 3473 21514471 ~ 21523897 (+)
hnrnpa1a LOC108255131,LOC108424623,LOC107707363,LOC107551332,LOC107754559 other upstream 609525 20870652 ~ 20882365 (+)
znf740a znf740a,LOC108254942,LOC108424621,LOC107754560,LOC107551334 other upstream 631163 20807858 ~ 20860727 (+)
errfi1a errfi1 other upstream 1314618 20119383 ~ 20177272 (+)
si:dkey-264d12.5 LOC108254816 other upstream 1623409 19848467 ~ 19868481 (+)
vamp3 vamp3 other upstream 1707965 19768983 ~ 19783925 (+)

Expression


Co-expression Network