mst1rb (mst1r,mst1rb,LOC107677494,LOC107686010)


Basic Information

Item Value
gene id mst1rb
gene name mst1r,mst1rb,LOC107677494,LOC107686010
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 2062844 ~ 2088852 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935396.2
TCTCTCCTCGGTGCCCGGGCTGCGCGCAGAGAGCGGGGTGGAGCGCGCGCTCGCTCCTGCGTTCTGAGCAGAACCGTTCGGACCTCCGAGTTCACCGAGTGAAGTTAGCCTTTAGCTAACAGGACACTTTTTACCGTTTTAAACCCGGAGGACGGAGGATAACAACGCGCAGGATAAGAGAAAAGCGGAGGAAAAGTTAACCGAGCTGTTCGTTTATCACTTCTGTGTTATTTGTTGTGAAGATGCAGTGAGGGAAAGAAAGTTCTCTCCTGTTCAGGACCGTTTACCTCACACAGAGATCCCATTCCGGTTCTCAGGATGTCTCCATTCGAAAGCTGGAGGTAACCAGAGGATTATCTGCGTTCCCTCATTCGACATGGTCCACTGGACCACTGTTCTGGTGCCATGTATCTGGATTCAGGCCCTTGCGACGTGGGTGGCATCAGACACCTGCCCCTCTGCGTCCCTCGCGTCAGTCAACTTCTCCGTGCCCTACCCCCTGCCCTCCTTTCAGACCTCCAACCCCATCCAGAACATCGCCGTCAACCCTTTTTACCATGAGGTCTACGTGGGGTCACGGAACCTCATCGAGGCGGTGAACAGCACTCTGGGTAAGCTGTGGGAGCTGCGCACTGGACCTGTGGGTAGCAAGGAGTGCCGGTTGTGTCGACTGTGCGACATTGAGAGCGATCCGTTCGAGGAGGATACGGACAGCGAGGTGCTGCTGCTCGACACCTTCCTCATGTACCTGTACACGTGCGGCAGCTCTCAGTACGGAGTGTGTTACTTCCACCAGCTCAATGAAAACGGACAGGCGCCGGCGCCCTCCAAGTGCCTTTTTCGCAAAGAAGCCAATTCTGCCGCTTTCTGCCCGGACTGCATCGCCAGCCCACTGGGCACCAAGGTCAGCATGGTGGAGGAGGGACAGACGGTGTATTTTTACGTCGCTGCGACGGTCAATGACAGCGTGACGCAGCGGTACGGCCGGAAGTCCGTCTCGGTGCGGCGTCCTTTAGCCACCGAGGATGGCTTCCACACGGATGTGCAGGGCCTGACGGTGCTGCCCGAGCTGAGGCGGGTGTACCCCATTGAGTACGTTTACAGCTTCTACACTAATGACTTTGTCTACTTCTTGTCGGTGCAGAGGGAGAAGGCGGAGCCGCAGGGCACGTCTCCTTATCAGACGCGACTCGGACGTCTGCCGCGTAACGAATGGGAAATGCGCCGCTACCGAGAGGTTGTGCTCGAGTGCCGTTTTGAACCCAAGCGCAGGCGCAGGAATGCGGGCGGTGCCGGCGCAAGCGAGGCCTTCAAGGACATCGTGTACAACGTGGTGCAGGCGGCGCACTTCGGCAGGGCCGGGCGCGAGCTAGCCGATGAGCTCGGCGCAGAAGAAAACGACGACATCCTGTACGGGGTTTTCGCTGTCACGGACGACTCGGGCGTTACTGAGCACGACTCGGCTCTCTGCGCATTCCCCATGGACTGGGTGAACAAGTTCATCGATCAGGGAGTGGAGGATTGCTGCAAATCTGGACCTGAGCAGCTCTCCCGCGGTCTGTGTCACTTCCAGACCTGCGAAAGCTGCCCACACGAGagcaTGGAGCATAATGTGAGCTGCAGAGATCAGCCCACTCTGGTGGCCCAGCCGTGTTACAGAGTGGATCTGTTCAACAGGCAGATGAGAGACACGTTGCTCACCTCTCTGCTCGTCACCACCATCGACAACAAAACCCTCGCTCACATCGGCACGGCCGACGGCAGACTGCTGCAGTTCGTCTTGCGGAGATCCAGTCCCATCATCTTCGCCAACTATTCCCTAGCGCAGAGCCAGAAGGTGTCGTCCATCGCTGCCGTGCTTCCTCCAGACCATCTCCTGTTTGTAGTGGGGAATAAGATGATCCAGGTGCCTCAGAGAGGTCCAGGGTGTCTCCACTTCCTCACCTGCGCTGCGTGTCTGACAGCACCAAGGTTTATGGCTTGTGGCTGGTGTTCGGGACGTTGCACCTGGCAGTCTGAGTGTTCAGGGCACTGGGTCAAAGAGTCCTGCCCACCTGTTATCACTGACTTCTTCCCTAAGACGGCGCCCCCTGATGGTCAGACGGAGGTGTCGCTGTGTGGATTCGAGTTCCAGTCGCCCCACAAACCTGACATCACCACCAGGACTCATGTGGTGAAGCTCGGAGAAACCGGCTGCTTGGTGCTCCCTCAAAAAAGCAACAGAACAGTGCTGATGTGTAAGATCCGTTCTGGAGTAACAGAGCCTCCGTTTAAACCGATTAACGTCACAGTGAGTGTGCGCGAGGATCGCAAGGAAGACCCTTACTTCATCAAGGGAATCGATGAGATGCCTGGATTCACATTTGTGCTGCCCAACATCACCGAGGTGCAGCCGGATTACGGTCCGATGAACGGAGGCACCTTGATCAACATCACCGGACCTTTCTTACACTCAGGAAAGACCAGGAAAGTCACACTGGATGGTGAAGTCTGCCCTAtcaaaggCGTGTCTATAGTCCGGGAGACCCTGTCCTCCATCTTTTGTCTGTCTCAGCGTGTCAATGAGGTGAAGGACGTGGTGCTGCAGGTCTACATCGATAAGTTTCGCATCGCCACCACCAGAGTGTTCCGCTACAAGGAGACGCCTGAGATCCTCTCCGTCCAGCCCGACTGCAGCTTCGACAACGGTTCGCGAATCACTATCGAAGGGAAAAATCTGGACTCTGTCTACAGGACCGTCATCCACTTCAAACCCAAAGAGAGCCACCTGAAACCAGTTTCCACCGAGTGCCAGGGAAAAGCCAAGTCCACCCGTATGGAGTGTGTGACCCCCGTCTTCCCCAGAGATGAGACGGAAGAAGGAGAGCTCTCCTTTGACATGGACGGAGCTGTGGGTCTGTGGAAGCAGGACTTCTCTTATCACCCCTATGGCAGGCCCATTCCCTTTGAGACCGAGGgacacattctcacactctaCCCTGGCTTTGATGAAGTTTCCTTACATCACCAGAAGCTGAACCTGGTGAACTCCTGCATGAAGATTACCATGACCGTTGGAGGGGTCGACTGTGGAGCGAAGGTTTTGGATAACGAGATCACCTGCCGCATCCCCAAAAACCTCACCATCCCTAACGAGGGCTTACCTGTGAAGATCACGGTCAACGGCGAGGTTCATGACGTGGGCACTGTCGTCCTGGTCAGTAACCACTACGTAGTGGGCATCGTGCTTGGCATTCTGGGAGCTCTGGTGGCTGGCGCAGTGCTGGCTTACGTCACTATGAAACACCTGAGAAAGAAGAAGACAGATTCTCTGGCTGAGAGTCGGCTGTCCCACTACTCCCGTAATCACAGTCTCTCAGGCAACGGCAGCGTCGAGCTCCTGCCTCTCGGAGACTACAGACGAGGAGAACTTCCCTTCAGTCCGAACTCTGCGTCCACCGTGCCTGTGGCGTTTCCCGGCCTGGTCTACGCCAACGCGCTGGAACCCAGCCTCAACCCGCTCTTGCCTTCCGAGAAAATCTCCATCTCTAGCTTCCATCCTGAGCTCCTGGAGGAAGTGAAGGACGTCCTCATCCCAGCGTCCATGCTTAACGTGCAGTACCATCAGATCATCGGGAAAGGTCACTTCGGCACAGTTTACCACGGTTACCTTACCACTGACCACAACAACAGGGAAATCCACTGTGCCGTGAAGTCACTAAGTAACAGAATAACGGACGTGGAGGAGGTCGAGCAGTTTTTGAAGGAGGGGATTCTGATGAAGGCTTTCCACCACAGTAATGTGCTCTCTCTGCTGGGCATCCTGTTGCCTCACAAAGGGCTCCCCCTAGTGGTGCTGCCCTACATGAAGCACGGAGACCTGCGTCACTTCATACGCTGTGAGAACAGGAACCCCACAGTCAAGGACCTGATTGGCTTCGGACTTCAGGTTGCCAAGGGGATGGAGTATTTGGCACAGAAGAAGTTTGTGCACAGAGACTTAGCTGCCCGCAACTGCATGCTGGACGAGTCGTACACGGTGAAGGTAGCAGACTTCGGCATGGCTCGCGACGTACTCGATAAGGAGTACTACAGCATCCAGGACCACAGGAAAGCTAAGCTGCCTGTCAAATGGATGGCCATCGAGAGCCTGCAGACGCAAAAATTCACATCTAAATCTGACGTGtgGTCCTTTGGGGTTCTGATGTGGGAGTTATTGACACGAGGAGCGAGCCCTTACCCAGAGGTCGACCCGTATGACATCACACATTACCTCTTAAGGGGGCGGCGACTCCCTCAGCCACAGTATTGTCCTAATCCACTGTTTGCTATCATGCTGCAGTGTTGGGATCCGGACCCGGAGCTGAGACCCAGCTTCTCCACACTAGTCTCTGAGGTGATGGCCATCCTCTCAGGCCTGGAAGGGGAGCACTACATCAGCCTGAACGTGACGTACGTGAACCTGGACCAGCCGCGCCCTTACCCCGCCCTCACTGACTCCGCAGACGAGTGCGAGTCCTCAGATGAAGACGAGGCGGGCTCAACTACCACCTGACCGGCTACGCGTGCCGTCACTCATAGAGAAGGTGCTAAGACGTCAACCCAGAGtcagtcattatttatttattatgtagcAGCCGTGCTGGAATGTAAATTTGTTaaagaaatttacatttacggtTTCTGTAGCATGTAGGAAAGACGAATGGTTGTCTGAGGTAAAATTAAGTGCACAATGCACAACTTCAGCCCTTCATTTTATTCAGAAATTGCAAAGAATCCACCAAGACTGGAGCCAAATCAGATCATGTGCCAGGTGTTGCAGTGTAAACAGGTGAGAGACTTAGAGACTAACATGGTTTGGTTTGTCcaatatttttagtttaaaaataaaagcatgaaaaataGGAAGTAGTGGTTACAGATATTAGCAACAAATGAGGAAGAGGATCGTATTCCATGTCAATCATTTCAAGAGCTGTAAAATTATggaaatgtactgtatgttaatgGTTTCCCTATTCAGGATACAGATAATGACCTTTAAAAAGCAAGATATTTATATGTAGCAAATGAAATCATGCTTCATCTGTGACGAACATTATGAACATGCACAAGAATTTTATTACACAGCAGTTTGGGTTTTTATTTGAATCCACAATGTCCACATTTCCCCAATTTTTTCCTCTGCAAGCTGCTGTATACCTTGTCAGGTTCAATCCACTTgaacaaaacagaaactgtctctttacaaatattatttttaaaaatagcagagTTTGGGGATCCAACTCACTCAAAGTGTCCGAAGTTATAATTTGTAAAATCATGCACGCTGTAATGTCTACACTGCTGCGTTTATAAAATGACAGATTGTGATGAAAAATGTTCCATACTGAGAGTAATAAGGCTTATTTTTAAAGTTGTGCACTTAGCCTGAGTGTTTTGCATTCTCAGTCCTGCAGCACAGCCCTCCTCATTAAGCCGcgtttccaaaatgttttgtaGCAGATTGATTATTGCTATAAATTGGCACTATTCTAGTAAAACCAGGAGTCAACAATCCCACACTGGATTGTTTAAGATCCAATTTTCCACCATTAGTCTGATGTAAGTCTGTCAAAATGTGTTTGGCCAAATTAGCAGCTCCTGAGCGACAcgacagaaaagcgttcactgCCATCCGTGAGCAAGAGGGAGCAAATTAGCCATGCaggtctgggtgggagggactTCCACTCTCTCCTCGTCAATCACACTGACACTATCCAATCGTGAGCATCTGTGAGTTgatgtatgtggaagaaggcggacagcgctttcctccaagtgtgtcgCGCTGCTAcagcattagcagcagttcgaaaagatgcggctggcttcacatgtcccGGAGGAAGCACTTAGCCTTCACTCTTCATGCCGTATGAtaagggagagctggctggtcgGTGGGAACTGGCCAAGAATAAATTAGGGAGAAAGTGGGggatttttagtttaaaaattttagtttaaactaaaaatagaaaatgagaTCATAAACAATTTGAAGATATTTTTCTGTGTTAGGAAAAAATTGGAGCAGTGAAATTCATTCTGGCTGCCTAATGGAGCCTGGTGATTGTCATGAAGGAAGATGATGACATTCTGTTTTAATAGTAAAGAAATCAATAATCAAGGTTACGAGTGTAAACATTAGGCTTCCACAGAACACGATAAGATTTCTGTTCGTAAGGTAACAGTTCGATATTTGACATTAGCACAAAACCTGCTATGATACGACACGATGCGATCTGATTTAATAACCTCTGATCCACATGAGACTCTGTTCAGAATCTGGAGTAGGTCTACTGGGGTTCAGAGACGATTATTTTAAAAGGATGAAAGTTTGAGGCAAATCAGCTCGCTAAtctgttaaattatttacaaaaaaaaaattttttttacacactagtTATCTCTCctttttataattcattataaacaatataacCATTTAAACCGTTGCCTTTTAATTCGATGCATTAATCCAAATTGTCCGATCATTACGCCCCTAATCAAGATGCACAAAGAATCATTTTATAGTCAAATCGTGGCTCCTTGAATTGAAATTTAATCATGAGCTGCTTAGAGCTTTCCACCTGCACCATTTTACCACGTTTTCATCCCCTCTGTGTCAGTATAAGATCTCATTAATACTGAATACTAAATCTATCAAGTACTTAAGATTCATGTACATCTTTTTAAAAGGAAGTGACAGCCCTAAAAGACAGATATTATATGTTACATTTAGTGTCCCTAACTCttaacacacctgattaaaCTGCGTCAGTTGATTATGAAGCGCTTCGTGAGTCAGATCAGGATGCGCTGGAGCTGAGAAGACGCTGAGCTGGCAATGGACTGGGAGAATTATAAAACACCAGGATCAGTACAGGCAGGATCGTAGtgggctgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatagaaagGAAACTGTTATATAAGAGAGCAGTATCAGGTTCCTCAGATACAGTGATGTTAGTGATATTAGCCGAGGTGGTGAAACGTCGAGCTCTCACATCTTCTGATTTTGTAAACACGCACATTTGAGTTTTGttgacttttatattttttgaacGTACAGTAGAAGACAGTGGTCACATTTTACTACTAGACCACTAAAAGGAGTATTTAGCTATAATATGCTGATGTGTTTAACACTGAACTCGttagctttttatttaatttagtgttAAATGGTACCTGCTAGGTTTCAGTCATTATTAGCAATGCTAATGCATTTTTCAGCCTGGTGTCTGTTCACTGCGTCTGTGACGTATGTCTGTTTAGTGCAGATAAGAATTTCTACTAGAAAACCAACAAAAATTGGCACTTAATCTTACCCTAATGCAACCATAACCACAAATCGTAATAATCTCTGAAAGGATGATTTTTACTGATGTATAGATAAATTTACAGATACGTCTGTAGGAGCGGGCAAATTTATTCGTCGCCAGGTTCAGCAagcattaaaagcaaaaaaagaaacttcTCCTTATTAACTTCCATATGATTtcagtttatgtttatgtttaaatttgtttgtgtttaaatgtttaaatgtgctTCATGGTGTTGTAATGTACCTCGATGCTGTAACTACAGCGCAAGCTTtcgaatcccaccacctgccgcactacacacatcagcagcAACACGTCAGATCTTTACCAGGCGGATTAATCAGCATGCACGGATGACAGGTGttcttttcaaaataaattCCAACGCAAAGCTCTGCCACTtactacacacctacacacagtCGCTTTCACACatcgagagaaaataaagatgctaatCAGAGTCAAGTAATATCTTTTTTACGTGCGATGTGAGGACAAAACACCAGGTTGTGCTACGTATTTGTTTCCCttagtgtgtatgcatgcacgtaactagctaactagctcaggatatatttttgttatatcgTGTCAGTTAAGGGACGGGACGtgacactggagcttttacatGCCTGGAGGACTCGATAATAAATTCCTGATTTGTCCAGCCCTGgttaattaattcaattcaacaaCTTTCCCCTAAACTTCCATTTGAATTGTTTCCCGTTTCAagtcatttctgtttctgttactcacacatacactacagacgCGATGGAAaaacattaggctgaaaaacgtTTTGAGTGTTAGTGATCACTTTGACTTCGTGAGCTCTAGCTGATGTATATTTTGGCTCATACGTTTGTACGTAATTGTatgtttgaaaataaaacagtatgtAATTGTTTTAGATTCTTGAGGCACGAGTATTAATCGATTTTCATTCTGTAGGTGAACCGATGACATTGTAGCTGTGCTTTATGTGGCTTGTGCATTTCTAATTTAAACACGAGATAGCATCACGAGATAGCGTAATTTATTTCACTGGCTTTAATTTGAAGTTCCTTCAACTGTATAGCAATTGTACCACGGTTaataacatttgtttaaataaaaagatgtaaagaaaaa

Function

symbol description
mst1rb Predicted to enable transmembrane receptor protein tyrosine kinase activity. Acts upstream of or within bone mineralization. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in basal plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in corpuscles of Stannius and pronephros. Human ortholog(s) of this gene implicated in nasopharynx carcinoma. Orthologous to human MST1R (macrophage stimulating 1 receptor).
mst1r Enables enzyme binding activity. Involved in positive regulation of MAP kinase activity; positive regulation of protein kinase B signaling; and response to virus. Located in cell surface. Implicated in nasopharynx carcinoma.

NR:

description
macrophage-stimulating protein receptor-like

GO: NA

KEGG:

id description
K05100 MST1R, RON, CD136; macrophage-stimulating 1 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935396.2 True 8543 mRNA 0.47 21 2062844 2088852

Neighbor

gene id symbol gene type direction distance location
inka1a LOC108280975 coding upstream 64409 1994213 ~ 1998435 (+)
gnai2a gnai2,LOC103358732,LOC104930488,LOC101487808 coding upstream 85712 1926177 ~ 1977132 (+)
slc38a3a slc38a3,LOC107715801,LOC107685967,LOC107718202,LOC106950485 coding upstream 142390 1878603 ~ 1920454 (+)
cacna2d3 cacna2d3,LOC108254724,LOC107751209,LOC107743247,LOC107582378 coding upstream 249908 1760864 ~ 1812936 (+)
cacna1da cacna1da,LOC108281043 coding upstream 310550 1660208 ~ 1752294 (+)
LOC113539428 LOC108255194 coding downstream 437867 2526719 ~ 2568406 (+)
grm2b LOC108281021,LOC108435310,LOC107575639,LOC107659540,LOC107715788 coding downstream 489522 2578374 ~ 2607935 (+)
si:ch211-213o11.11 LOC108281028 coding downstream 532660 2621512 ~ 2629721 (+)
zgc:172270 LOC108281023 coding downstream 546462 2635314 ~ 2641323 (+)
sypl2a sypl2 coding downstream 595197 2684049 ~ 2696967 (+)
LOC113539753 NA non-coding upstream 41266 2007610 ~ 2021578 (+)
G300487 NA non-coding upstream 118646 1943426 ~ 1944198 (+)
G300479 NA non-coding upstream 138377 1920527 ~ 1924467 (+)
G300467 NA non-coding upstream 205443 1854701 ~ 1857401 (+)
G300447 NA non-coding upstream 240505 1820621 ~ 1822339 (+)
G300649 NA non-coding downstream 105436 2194288 ~ 2195719 (+)
LOC117599869 NA non-coding downstream 231195 2320047 ~ 2325625 (+)
G300688 NA non-coding downstream 264992 2353844 ~ 2354096 (+)
G300689 NA non-coding downstream 266181 2355033 ~ 2355245 (+)
LOC113539650 NA non-coding downstream 287120 2375972 ~ 2387101 (+)
mon1a mon1a other upstream 2203 2053083 ~ 2060641 (+)
LOC117599925 NA other upstream 563672 1496860 ~ 1499172 (+)
erc2 erc2,LOC107582387,LOC108414413,LOC107694874,LOC107699320 other upstream 568199 1448442 ~ 1494645 (+)
fbxo42 fbxo42,LOC107719051,LOC107656898 other upstream 1190088 863258 ~ 872756 (+)
LOC113539702 LOC108281106 other upstream 1217974 842853 ~ 844870 (+)
camkvb camkv,LOC108414427,LOC107718199,LOC107685970,LOC107715795,LOC107659532,LOC107576418 other downstream 52670 2141522 ~ 2188917 (+)
LOC113539549 LOC108254930 other downstream 626810 2715662 ~ 2723581 (+)
LOC113539463 adamts9 other downstream 1761709 3850561 ~ 3913086 (+)
cadpsa cadps other downstream 2069380 4158232 ~ 4278673 (+)
LOC113539599 tmem110,mustn1,LOC108435844,LOC107746891,LOC107656046,LOC107755187,LOC103359875,LOC107091502 other downstream 2362188 4451040 ~ 4469196 (+)

Expression


Co-expression Network