il10 (il10)


Basic Information

Item Value
gene id il10
gene name il10
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 6949935 ~ 6952787 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935649.2
CCCGAGGATTGAGCGGCACGCTTACGAAAGGGTTAACACTGGTGTGACGAGATCTTCGAGAATGCTCCTGTATAGGTTCCTCCTGTTTGCTTTGCTGACGGCTTTGCTGCTTCAGGCTGCTCAGTGCAAGAGGACGATCTGCAAAGACAGCTGCTGCTCCTTCGTTGAGAAATTTCCAGTCAGATTGAAAGCGCTTCGTTCTTCATACGCCAAGATCCGAGACTACTACGAATCCAAGGATGAGCTGGACACCTCACTATTCAACAGAACAGTTCTTGAACACTTCAAAAGCCCTTACGGATGCAGTGTCATGAACGACATTCTGCATTTCTACTTGGAGACCGTGTTGCCTAGTGCCATCACAGGACACACAACCAAAGACCACTTCAGAACTCCCATCGACACCATCGGAAACTTATTCCAAGAGCTCAAGAGGGAGCTGATCCAGTGTAGGAGTTACTTCACATGCCGGAAACCTTTCGAAATCTCCAGCGTCAAGAACTCATACAGTCAAATGGGAGGGAAAGGCCTGTACAAAGCCATGGGAGAGCTGGACATGTTGTTCAACTACATTGAAGATTATGTGGCATCACAGGGACGTAGACGCTGAATGAATGGATAAGGACACACTTGATAAGCCAACGGGACCCCTATTTGAATAGTGTGGAAACAAGACTGGAACATAATATTTACACTGGATGTATAAATGTctaaatgcacaaatatttatttattactactttAAAAACTCTGTTTCTGCTGTGCTACCACACTAAatgatttgcattttttgtaCTTGGCTGTTTTTTGTACAGCCCTAGAATAGTTCCCGATGTGTTTATCTTCCTAGAAGAATTAAGCTCATACTGTTTAAGTCATATTGACCACAGCTTTTCTGTAATGTAGTTGCTTTTTGCAATGAAGTGtaataactgtttaaaaatgttgacaattttttatatttattaacagtGTAATTGCTACTTCAGagcttttaatttattgttttgtatgTTGTATTAAATGCTGGTACTTTGGTTAACTGAAGTATTAACTGTTTGATGTATCATATTTCAAATTTACtaattaaagtataaaaaataaataca

Function

symbol description
il10 Predicted to enable cytokine activity. Acts upstream of or within defense response to bacterium and response to lipopolysaccharide. Predicted to be located in extracellular space. Is expressed in blood; digestive system; gill; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); autoimmune disease (multiple); eye disease (multiple); gastrointestinal system cancer (multiple); and hematologic cancer (multiple). Orthologous to human IL10 (interleukin 10).

NR:

description
interleukin-10 precursor

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function

KEGG:

id description
K05443 IL10, CSIF; interleukin 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935649.2 True 1109 mRNA 0.40 5 6949935 6952787

Neighbor

gene id symbol gene type direction distance location
il19l LOC108281068 coding upstream 9171 6938018 ~ 6940764 (+)
prelp prelp coding upstream 16784 6925266 ~ 6933151 (+)
zgc:113307 LOC108281030 coding upstream 31950 6903339 ~ 6917985 (+)
LOC113539624 chia,LOC108255197,LOC108255198,LOC108435172 coding upstream 64413 6882388 ~ 6885522 (+)
kif21b kif21b coding upstream 298906 6589042 ~ 6651029 (+)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC105017400,LOC107548849 coding downstream 260922 7213709 ~ 7218371 (+)
foxp4 foxp4,LOC107728618 coding downstream 456048 7408835 ~ 7541196 (+)
mdfi mdfi,LOC106565692 coding downstream 596999 7549786 ~ 7593458 (+)
ppfia4 ppfia4 coding downstream 753441 7706228 ~ 7834194 (+)
si:ch211-86h15.1 LOC108255151 coding downstream 903057 7855844 ~ 7896743 (+)
G303658 fmod non-coding upstream 49405 6898490 ~ 6900530 (+)
G303645 LOC108281052 non-coding upstream 79163 6867718 ~ 6870772 (+)
G303437 NA non-coding upstream 156709 6791318 ~ 6793226 (+)
G303404 NA non-coding upstream 290597 6635857 ~ 6659338 (+)
G303181 NA non-coding upstream 598839 6350192 ~ 6351096 (+)
LOC113539683 NA non-coding downstream 42058 6994845 ~ 7001112 (+)
G303806 srgap2 non-coding downstream 148983 7101770 ~ 7105529 (+)
G303889 NA non-coding downstream 462628 7415415 ~ 7420578 (+)
G303891 NA non-coding downstream 467919 7420706 ~ 7446186 (+)
G303892 NA non-coding downstream 484668 7437455 ~ 7448739 (+)
cpne5b LOC108436414,LOC108280970,LOC103367600 other upstream 170577 6663968 ~ 6779358 (+)
tmem167b tmem167b,LOC107592590,LOC107555997 other upstream 447299 6498060 ~ 6502636 (+)
LOC113539422 rusd4,LOC108255275,LOC106582904,LOC106565791,LOC108435115 other upstream 656186 6200446 ~ 6293749 (+)
ptprga ptprg,LOC107752167,LOC106583020 other upstream 1478374 5210644 ~ 5471561 (+)
LOC113539599 tmem110,mustn1,LOC108435844,LOC107746891,LOC107656046,LOC107755187,LOC103359875,LOC107091502 other upstream 2480739 4451040 ~ 4469196 (+)
lrrn2 lrrn2,LOC108425772,LOC107739267,LOC107603068,LOC107675837 other downstream 1021804 7974591 ~ 8026929 (+)
nfasca nfasc other downstream 1528308 8481095 ~ 8561702 (+)
shisa4 shisa4,LOC108254774,LOC107552307 other downstream 2583338 9536125 ~ 9551761 (+)
G305515 NA other downstream 3559884 10512671 ~ 10513270 (+)
LOC113539694 LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 3811487 10764274 ~ 10773442 (+)

Expression


Co-expression Network