il19l (LOC108281068)


Basic Information

Item Value
gene id il19l
gene name LOC108281068
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 6938018 ~ 6940764 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935650.2
ccATTCTAAGGAGAAACACTCATCAGACACCTCAAGGTCAGACTATCAAATCTAAAGATGAAAACTTCCCTGATGTGCATCCTTGCCATTTGTGCTTTGCTGGCTGGGATCTGGGGCTCAGCCAGGGGACGCAGGCTCCATCTGGGTTCCTGTACGCTGACGGTTCACACTCACGAGCTCAGGCATCACTTCCAGCAGATCCGCCACAATATGGTCACACAAGACAACCACAAGGGTGTGCGCTTGCTGAGGGGGGACATGATGAAGAGCTTGCAGGCTACAGATAGCTGCTGCTTTCTTAGGCAACTCCTGCGCTTCTATATCGAGAAGGTCTTCAGCGGCTACACGAGCAGCCAGTTGCTCCACCAGAGAACCACCAGCGTTCTGGCCAACTCTTTTCTCAGCATGACCAAGGACTTGCGAGCATGTCACGCTCAGATGCTCTGCCAGTGCAGCCAGGAAGCCAACCTGAAATTTGATGCCATTCAAGAAACCTATGACAAGCTGGAGGTGGGCCCTGCGTCGGTAAAGGCCATAGGAGAGCTGGACTCTCTCCTGGAGTGGCTTGAGAGCTTCCACAGCAAAGACCACAAGCTCCAGCATCACGATGATGACTCAAAATAGGATCCCCATGGCGTCCACTTCATTATTCAGTGCTGATTCATTTATAAGAGCTACATGAAACTTTAATTTAATCTCATAATTATCATATTTGTAGGATTTGTAGGATTTTCATTTTTGGTGAAAAGCATGTCATAGTGTGATTATCAGACTGGAATTAAATCGGTAGCGTTTTTGTTACTGACAGTACAGACCGCATATCTGCAACTTGTTTAACGTTAACAGTAGACCGCTGTAAAGGCGTCTCCTGAGGCTGTATAAGCTATGTCTTAATAGTgtacatgttaaatatttaatggttGCTTTATGCTGTTGTTGTGACAGCGTTATTTCTGACTACAATAATGCCTGTGGccttttaatttatgtttatctGCACTCATGACTCGAAAGAGTTGTGCTGGAATGTAGACCTTTGGGGTCAGTTTGTTTGAATCATGTTTAAATTCAACTGTaacttaaaagaaaataaatgt

Function

NR:

description
putative interleukin 20 precursor

GO:

id name namespace
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0001934 positive regulation of protein phosphorylation biological_process
GO:0005615 extracellular space cellular_component
GO:0005157 macrophage colony-stimulating factor receptor binding molecular_function

KEGG:

id description
K22667 IL20; interleukin 20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935650.2 True 1097 mRNA 0.45 6 6938018 6940764

Neighbor

gene id symbol gene type direction distance location
prelp prelp coding upstream 4867 6925266 ~ 6933151 (+)
zgc:113307 LOC108281030 coding upstream 20033 6903339 ~ 6917985 (+)
LOC113539624 chia,LOC108255197,LOC108255198,LOC108435172 coding upstream 52496 6882388 ~ 6885522 (+)
kif21b kif21b coding upstream 286989 6589042 ~ 6651029 (+)
srpk1b LOC108254807,LOC108436365,LOC107592563,LOC107680449,LOC107751004 coding upstream 367045 6536593 ~ 6570973 (+)
il10 il10 coding downstream 9171 6949935 ~ 6952787 (+)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC105017400,LOC107548849 coding downstream 272945 7213709 ~ 7218371 (+)
foxp4 foxp4,LOC107728618 coding downstream 468071 7408835 ~ 7541196 (+)
mdfi mdfi,LOC106565692 coding downstream 609022 7549786 ~ 7593458 (+)
ppfia4 ppfia4 coding downstream 765464 7706228 ~ 7834194 (+)
G303658 fmod non-coding upstream 37488 6898490 ~ 6900530 (+)
G303645 LOC108281052 non-coding upstream 67246 6867718 ~ 6870772 (+)
G303437 NA non-coding upstream 144792 6791318 ~ 6793226 (+)
G303404 NA non-coding upstream 278680 6635857 ~ 6659338 (+)
G303181 NA non-coding upstream 586922 6350192 ~ 6351096 (+)
LOC113539683 NA non-coding downstream 54081 6994845 ~ 7001112 (+)
G303806 srgap2 non-coding downstream 161006 7101770 ~ 7105529 (+)
G303889 NA non-coding downstream 474651 7415415 ~ 7420578 (+)
G303891 NA non-coding downstream 479942 7420706 ~ 7446186 (+)
G303892 NA non-coding downstream 496691 7437455 ~ 7448739 (+)
cpne5b LOC108436414,LOC108280970,LOC103367600 other upstream 158660 6663968 ~ 6779358 (+)
tmem167b tmem167b,LOC107592590,LOC107555997 other upstream 435382 6498060 ~ 6502636 (+)
LOC113539422 rusd4,LOC108255275,LOC106582904,LOC106565791,LOC108435115 other upstream 644269 6200446 ~ 6293749 (+)
ptprga ptprg,LOC107752167,LOC106583020 other upstream 1466457 5210644 ~ 5471561 (+)
LOC113539599 tmem110,mustn1,LOC108435844,LOC107746891,LOC107656046,LOC107755187,LOC103359875,LOC107091502 other upstream 2468822 4451040 ~ 4469196 (+)
lrrn2 lrrn2,LOC108425772,LOC107739267,LOC107603068,LOC107675837 other downstream 1033827 7974591 ~ 8026929 (+)
nfasca nfasc other downstream 1540331 8481095 ~ 8561702 (+)
shisa4 shisa4,LOC108254774,LOC107552307 other downstream 2595361 9536125 ~ 9551761 (+)
G305515 NA other downstream 3571907 10512671 ~ 10513270 (+)
LOC113539694 LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 3823510 10764274 ~ 10773442 (+)

Expression


Co-expression Network